Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc04g082320.3.1
CDS Infomation	Pentatricopeptide repeat-containing protein (AHRD V3.3 *** D7RNT7_CAPAN)
Sequence	ATGCCTAAACTTATATCAAAGGTTCGTGCCAGTTCGATATTGCAAAGATTTTCAAAATTA AATGCTATTCGAAATGGAGGAAAGGAAGCTGGAGGCTACAGCCAAGCTATGAGAACTCTT ACTACCTCAAATGGGCATGTCGGGGAGCCGGTTTCAAGATTAGGGCAAAAACAAATTGTC GATGCACTTGTCTTGGGAGAGAGAAGAAGAGCTGTTAGTCTCCTGTATGAGTTTAGTCTT GGAAACAACAAATTGAGTGCTGATGATTTTGCTTCTATACTGCAAAGTTGTGCAAGACTG CCTGATCCATTATTTGTGATGGAAACTTGGAAGATCATGGAGGAGAAGGAAATCAACATT AGTGACAAGTGTTATGCTCTTGCCGTTCGAGCACTCTGTAAAGGGGGTTACTTAAAGGAG GCACTCAGTTTGATGAGTATCATGGCAGAAAACACAAATTGTTATTCTATGTTGCCAATT TATAACAACTTCCTAGCTGCTTGTTATGAAACACAAACAATAGATTATGCTAATGAATGT ATGGATTTGATGGAGCATCAGATGGTGGGAAAGAATGAGATAACATATGCTCAGCTTCTC AAGCTTGCAGTTTTGCAGCAAAACCTGTCTGCTGTCCATGAAATCTGGAAGGAATGTAGT AAATTTTACAGTCTCAGCCTTCTCTCTCTGAGGAAGTTTATATGGTCCTTCACGGAGCTG AGAGATCTGAATTCAGCCCACACAGCCTTACAGCACATGGTGAGATTGGCTTTTACGGAA AACTCTTACATTAGTAGAACTGCCGAGGGGAGGTTTTGTGATTTAAGATTGGATATTCCA GCACCTTCCTCTGGCAATTGGAGTTTTATCGATGTATCTGTCGACACCGTGGATAGCAGC AATTTTGATATGGAAATACAAAGTCTTGGCAGAAAAACATTAAGTGCATCTGTTGTGAAG CTTTTGAGGTGGTCCTTCAATGATGTTATGCATGCTTGTGCACAAGTTCAAAATTGTGAT TTGGCTGAACAGTTGATGTTACAGATGCAAACTCTTGGTTTGCAACCATCAGGGAGTACA TATGATGGCTTCATTAGGGCAATTGCTACCACAAGAGGCTTTAGTGACGGGGTGGAAGTG CTAAAGGTTATGAAAGAGAAAAATATTAAGCCTCATGATTCAACTCTTGCTGTTTTAGCA GTCATGTGCAGCAGAGAGTTGGAACTCAATCTAGCAGAGGCTTTCTTGGATGAGATGTCC AAAATCCATAATCCTCGTCCTTATAATGCTTTTCTTGAAGCATGTGATGTTCTGGATCGG CCCGAACGAGCAGTTCAAATATTGGCTAAGATGAAAAGGTTGAATCTTCAGCCAAATATC AGGACATATGAGTTGCTATTCTCACTGTTTGGTAATGTAAATGCACCTTATGAAGAGGGC AACATGCTGTCACAAGTGGATGTTGCTAAAAGGATAAATGCTATAGAAATGGACATGATG AGGAATGGCATTCCGCACAGTCATCTGTCGTTGAGGAATGTGTTGAAAGCGCTTGGAACA GAAGGGATGGTAAAGGAGCTGATTCAATATTTACGTGCTGCAGAGAATCGGTTTTCTCGT TATGACACCTATATGATAACACCTGTCTATAATACAGCTTTACACTCCCTTATTGAGGCT AAAGAGAGTAAAGTGGCAACACAGATATTCAAATCAATGGTGTCTTCTGGTGTTACACCT GATGCTGCAACATATAATATCATGATTGACGGCTGTAGCATTGTTGGATGTTTCAGATCT GCACTTACCCTGATCTCTATGATGTTCCGCACTGGTTTCAACCCTCAAGCAGTGACTTTA ACTGGCCTGTTAAAGATATTGTTGAGATCTGAGGACTTTGATGGAGCATTAGAATTGTTG AATCAAGGAATATTAGAAGGGATCCAGCTTGATGTACTTCTATATAACACCATTTTTCAA GTGGCAGCTGAGAAGGGAAGAATAGATGTCATCGAACTCATTGTTGAGCACATGCACCTC CAAGGGGTTCTCCCAGATCCATCAACATGCAGTCATGTTTTCGCTGCATATGTAGACCAT GGATTCTATAACACTGCCATGGAAGCTTTGCAAGTTTTGAGTGTGCGAATGATTGTTGAG GTTGAGAAAGATACAGATGAAAAACGAACTGAACTTGAAAATCTAATTCTTGGTGAAGAC TCGGAAGATGAGCCCCAGATTCTTAAGACTTTTAAAGACTCGAAAGAATATCTTACTGTT GCCTTACTGCAATTAAGATGGTGCGCCATACTTGGATATCCAGTATCTTGGTCACCTTCA GACAGTCAATGGGCCAGGAGACTTTCAAGTAATTTTGCTTCAACAAACGGTCTTCTGTGA

Peptide Sequence

PEP ID	Solyc04g082320.3.1
PEP Infomation	Pentatricopeptide repeat-containing protein (AHRD V3.3 *** D7RNT7_CAPAN)
Sequence	MPKLISKVRASSILQRFSKLNAIRNGGKEAGGYSQAMRTLTTSNGHVGEPVSRLGQKQIV DALVLGERRRAVSLLYEFSLGNNKLSADDFASILQSCARLPDPLFVMETWKIMEEKEINI SDKCYALAVRALCKGGYLKEALSLMSIMAENTNCYSMLPIYNNFLAACYETQTIDYANEC MDLMEHQMVGKNEITYAQLLKLAVLQQNLSAVHEIWKECSKFYSLSLLSLRKFIWSFTEL RDLNSAHTALQHMVRLAFTENSYISRTAEGRFCDLRLDIPAPSSGNWSFIDVSVDTVDSS NFDMEIQSLGRKTLSASVVKLLRWSFNDVMHACAQVQNCDLAEQLMLQMQTLGLQPSGST YDGFIRAIATTRGFSDGVEVLKVMKEKNIKPHDSTLAVLAVMCSRELELNLAEAFLDEMS KIHNPRPYNAFLEACDVLDRPERAVQILAKMKRLNLQPNIRTYELLFSLFGNVNAPYEEG NMLSQVDVAKRINAIEMDMMRNGIPHSHLSLRNVLKALGTEGMVKELIQYLRAAENRFSR YDTYMITPVYNTALHSLIEAKESKVATQIFKSMVSSGVTPDAATYNIMIDGCSIVGCFRS ALTLISMMFRTGFNPQAVTLTGLLKILLRSEDFDGALELLNQGILEGIQLDVLLYNTIFQ VAAEKGRIDVIELIVEHMHLQGVLPDPSTCSHVFAAYVDHGFYNTAMEALQVLSVRMIVE VEKDTDEKRTELENLILGEDSEDEPQILKTFKDSKEYLTVALLQLRWCAILGYPVSWSPS DSQWARRLSSNFASTNGLL*

Transcript Sequence

Transcript ID	Solyc04g082320.3.1
Transcript Infomation	Pentatricopeptide repeat-containing protein (AHRD V3.3 *** D7RNT7_CAPAN)
Sequence	GAATGAAAAGCCCATTACTAGTATTAACGGGGGTAGAAACCAGCTTCTTCTCCGATTCTC AGAGAAAGCAAAAAACCAGAGTCGCCGGAAACACTGTCCTCGCGGGCGGGCCTAGCTGTA GTCGCAGTGGTCGGACTGATTACAATTTCCGGACTAACCGTTCTGGAAAATTTCTTCGTG CTGCTAGTACTATGAACTCATCGAACCGAAAGTTTTAAGTTATTTCACAGGAAGCATTGA GAAGATGCCTAAACTTATATCAAAGGTTCGTGCCAGTTCGATATTGCAAAGATTTTCAAA ATTAAATGCTATTCGAAATGGAGGAAAGGAAGCTGGAGGCTACAGCCAAGCTATGAGAAC TCTTACTACCTCAAATGGGCATGTCGGGGAGCCGGTTTCAAGATTAGGGCAAAAACAAAT TGTCGATGCACTTGTCTTGGGAGAGAGAAGAAGAGCTGTTAGTCTCCTGTATGAGTTTAG TCTTGGAAACAACAAATTGAGTGCTGATGATTTTGCTTCTATACTGCAAAGTTGTGCAAG ACTGCCTGATCCATTATTTGTGATGGAAACTTGGAAGATCATGGAGGAGAAGGAAATCAA CATTAGTGACAAGTGTTATGCTCTTGCCGTTCGAGCACTCTGTAAAGGGGGTTACTTAAA GGAGGCACTCAGTTTGATGAGTATCATGGCAGAAAACACAAATTGTTATTCTATGTTGCC AATTTATAACAACTTCCTAGCTGCTTGTTATGAAACACAAACAATAGATTATGCTAATGA ATGTATGGATTTGATGGAGCATCAGATGGTGGGAAAGAATGAGATAACATATGCTCAGCT TCTCAAGCTTGCAGTTTTGCAGCAAAACCTGTCTGCTGTCCATGAAATCTGGAAGGAATG TAGTAAATTTTACAGTCTCAGCCTTCTCTCTCTGAGGAAGTTTATATGGTCCTTCACGGA GCTGAGAGATCTGAATTCAGCCCACACAGCCTTACAGCACATGGTGAGATTGGCTTTTAC GGAAAACTCTTACATTAGTAGAACTGCCGAGGGGAGGTTTTGTGATTTAAGATTGGATAT TCCAGCACCTTCCTCTGGCAATTGGAGTTTTATCGATGTATCTGTCGACACCGTGGATAG CAGCAATTTTGATATGGAAATACAAAGTCTTGGCAGAAAAACATTAAGTGCATCTGTTGT GAAGCTTTTGAGGTGGTCCTTCAATGATGTTATGCATGCTTGTGCACAAGTTCAAAATTG TGATTTGGCTGAACAGTTGATGTTACAGATGCAAACTCTTGGTTTGCAACCATCAGGGAG TACATATGATGGCTTCATTAGGGCAATTGCTACCACAAGAGGCTTTAGTGACGGGGTGGA AGTGCTAAAGGTTATGAAAGAGAAAAATATTAAGCCTCATGATTCAACTCTTGCTGTTTT AGCAGTCATGTGCAGCAGAGAGTTGGAACTCAATCTAGCAGAGGCTTTCTTGGATGAGAT GTCCAAAATCCATAATCCTCGTCCTTATAATGCTTTTCTTGAAGCATGTGATGTTCTGGA TCGGCCCGAACGAGCAGTTCAAATATTGGCTAAGATGAAAAGGTTGAATCTTCAGCCAAA TATCAGGACATATGAGTTGCTATTCTCACTGTTTGGTAATGTAAATGCACCTTATGAAGA GGGCAACATGCTGTCACAAGTGGATGTTGCTAAAAGGATAAATGCTATAGAAATGGACAT GATGAGGAATGGCATTCCGCACAGTCATCTGTCGTTGAGGAATGTGTTGAAAGCGCTTGG AACAGAAGGGATGGTAAAGGAGCTGATTCAATATTTACGTGCTGCAGAGAATCGGTTTTC TCGTTATGACACCTATATGATAACACCTGTCTATAATACAGCTTTACACTCCCTTATTGA GGCTAAAGAGAGTAAAGTGGCAACACAGATATTCAAATCAATGGTGTCTTCTGGTGTTAC ACCTGATGCTGCAACATATAATATCATGATTGACGGCTGTAGCATTGTTGGATGTTTCAG ATCTGCACTTACCCTGATCTCTATGATGTTCCGCACTGGTTTCAACCCTCAAGCAGTGAC TTTAACTGGCCTGTTAAAGATATTGTTGAGATCTGAGGACTTTGATGGAGCATTAGAATT GTTGAATCAAGGAATATTAGAAGGGATCCAGCTTGATGTACTTCTATATAACACCATTTT TCAAGTGGCAGCTGAGAAGGGAAGAATAGATGTCATCGAACTCATTGTTGAGCACATGCA CCTCCAAGGGGTTCTCCCAGATCCATCAACATGCAGTCATGTTTTCGCTGCATATGTAGA CCATGGATTCTATAACACTGCCATGGAAGCTTTGCAAGTTTTGAGTGTGCGAATGATTGT TGAGGTTGAGAAAGATACAGATGAAAAACGAACTGAACTTGAAAATCTAATTCTTGGTGA AGACTCGGAAGATGAGCCCCAGATTCTTAAGACTTTTAAAGACTCGAAAGAATATCTTAC TGTTGCCTTACTGCAATTAAGATGGTGCGCCATACTTGGATATCCAGTATCTTGGTCACC TTCAGACAGTCAATGGGCCAGGAGACTTTCAAGTAATTTTGCTTCAACAAACGGTCTTCT GTGAAGGTTTCATGTTTCCACAGGTGTGTGGACTCTTTTGATCTTGCATATCACCTGGTA TGTCAATTCTCAGTTCTGATACGCTAACTCGTGATATATTAATGATCGGAATGGGTTAAT GAGGAAGGATATGGTCCTCATTTCAATACCAGGTTGTCATAGGTAGTCAAGTCAGAATCT TCCCCAAGTATGAAATCCTGGCAATGTTGCAGATTATGCCTTTCTGATTGTACAGCAATA GCAGCTAAAGGTTTCAGCAGAAAAAATGTTGAGAAAATTCTGATTGCAAAATAATCTAGT GTTAGTAGGATCTGACTGATCCATTCATTTTGTTGTACCAACAGGTAGTGTACATTATTG TTCAACAGCCAATAATTACCTCTTGCCAAAAATTGACTAGTCTTTTTATGCCAAAATGTT TGCTACTCTGTAGCATTAATTATTTGTCAGTTCCACACTTGCTCATAT