Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g082090.3.1
CDS Infomation

Alpha-amylase (AHRD V3.3 *** K4BVT6_SOLLC)
Sequence

ATGGGGTTTGATGAAAGTCAGCAGTCTGATCCATTGGTTGTGATACGCAATGGAAAGGAG
ATCATATTGCAGGCATTCAACTGGGAATCTCATAAACATGATTGGTGGAGAAATTTAGAT
ATGAAAGTTCCTGATATTGCAAAGTCTGGTATCACAACTGCTTGGCTGCCTCCGGTGTGT
CACTCATTGGCTCCTGAAGGTTACCTTCCACAGAACCTTTATTCTCTCAATTCTTCATAT
GGTTCTGAGGATCTCTTAAATGCTTTACTTGATAAGTTGAAGCAGTACAAAGTTAGAGGG
ATGGCAGACATAGTCATTAACCATCGTGTTGGGACTACCCAAGGGCATGGTGGAATCTAC
AATCGCTATGATGGAATTCCTATGTCTTGGGATGAACATGCTATTACATCTTGCACTGGT
GGAAGGGGTAACAAAAGCACTGGAGACAACTTTAACGGATTTCCAAATATAGATCATACA
CAATCCTTTGTCCGGAAAGATCTCATTGACTGGATGCGGTGGCTAAGATCCTCTGTTGGC
TTCCAAGATTTTCGTTTTGATTTTGCCAAAGGTTATGCTTCGAAGTATGTAAAGGAATAT
ATCGAGGGAGCTAAGCCAATATTTGCAGTTGGAGAATACTGGGACACTTGCAATTACAAG
GGCAGCAATTTGGATTACAACCAAGATAGTCACAGGCAAAGAATCATCAATTGGATTGAT
GGCGCGGGACAACTTTCAACTGCATTCGATTTTACAACAAAAGCAATCCTTCAGGAAGCA
GTTAAAGGAGAATTCTGGCGTTTGCGCGACTCTAAGGGGAAACCACCAGGAGTTTTAGGA
TGGTGGCCTTCAAGGGCTGTCACTTTTATTGATAATCACGACACTGGATCAACTCAGGCG
CACTGGCCTTTCCCTTCACATCATGTTATGGAGGGCTATGCATACATTCTAACGCACCCA
GGGATACCATCAGTTTTCTATGACCATTTCTACGAATGGGATAATTCCATGCATGACCAA
ATTGTAAAGCTGATTGCTATTCGGAGGAATCAAGGCATACACAGTCGTTCATCTATAAGG
ATTATTGAGGCACAGTCAAACTTATACGCTGCAACCATTGATGAAAAGGTTAGCATGAAG
ATCGGGGACGGATCATGGTGCCCTGCTGGGAAAGAGTGGACTCTCGCGACCAGTGGCCAT
CGCTATGCAGTCTGGCAGAAGTAA

Peptide Sequence

PEP ID

Solyc04g082090.3.1
PEP Infomation

Alpha-amylase (AHRD V3.3 *** K4BVT6_SOLLC)
Sequence

MGFDESQQSDPLVVIRNGKEIILQAFNWESHKHDWWRNLDMKVPDIAKSGITTAWLPPVC
HSLAPEGYLPQNLYSLNSSYGSEDLLNALLDKLKQYKVRGMADIVINHRVGTTQGHGGIY
NRYDGIPMSWDEHAITSCTGGRGNKSTGDNFNGFPNIDHTQSFVRKDLIDWMRWLRSSVG
FQDFRFDFAKGYASKYVKEYIEGAKPIFAVGEYWDTCNYKGSNLDYNQDSHRQRIINWID
GAGQLSTAFDFTTKAILQEAVKGEFWRLRDSKGKPPGVLGWWPSRAVTFIDNHDTGSTQA
HWPFPSHHVMEGYAYILTHPGIPSVFYDHFYEWDNSMHDQIVKLIAIRRNQGIHSRSSIR
IIEAQSNLYAATIDEKVSMKIGDGSWCPAGKEWTLATSGHRYAVWQK*

Transcript Sequence

Transcript ID

Solyc04g082090.3.1
Transcript Infomation

Alpha-amylase (AHRD V3.3 *** K4BVT6_SOLLC)
Sequence

ACTGTTCACACCATCATAATTAGTTAGCCTCCTATTTTCTTCACATCCCAACAATGCCAA
TGAGGAAAACTTTTTAAAAGCACTATATTTAATGGGTTTTCGAGGAACCAGTTCCCTCAT
GAAGTACTTCAATTTAATGGGTTTTGAATCAGGAACAGTAAAGTTGGTTGTTTAATTGAT
TATTGATTAATATGATCCCAATTTGAGATTTTTCGCCATCTTTCGGCCGCAATTTGTATG
AACTGTCGCCACCCCAATGGACAGTCGCCGCCGTTACCGCCACCGCACCATTCTCGGCGC
GTCGTCAATCTCCTCCACCCCATTGCCGTCAATTCCAAGCTTCCAATGAACAATTGCCAC
GTGTCACTGCCAATTCACCGCCAAACGTGAATATCACTGACGAACGATTTCGGAGTGGAA
CGAATCCGGAAAATGGATTACTTTCTAGTTGCTACGTTGAGGAACGTAATTTCAAGCTGC
GATCGGCTTTTTTTTCCTGAACAAGCAAAGTAAAGTTGTGAGTTCGAGTTAGCAAAGAAC
GTGTGATGGGGTTTGATGAAAGTCAGCAGTCTGATCCATTGGTTGTGATACGCAATGGAA
AGGAGATCATATTGCAGGCATTCAACTGGGAATCTCATAAACATGATTGGTGGAGAAATT
TAGATATGAAAGTTCCTGATATTGCAAAGTCTGGTATCACAACTGCTTGGCTGCCTCCGG
TGTGTCACTCATTGGCTCCTGAAGGTTACCTTCCACAGAACCTTTATTCTCTCAATTCTT
CATATGGTTCTGAGGATCTCTTAAATGCTTTACTTGATAAGTTGAAGCAGTACAAAGTTA
GAGGGATGGCAGACATAGTCATTAACCATCGTGTTGGGACTACCCAAGGGCATGGTGGAA
TCTACAATCGCTATGATGGAATTCCTATGTCTTGGGATGAACATGCTATTACATCTTGCA
CTGGTGGAAGGGGTAACAAAAGCACTGGAGACAACTTTAACGGATTTCCAAATATAGATC
ATACACAATCCTTTGTCCGGAAAGATCTCATTGACTGGATGCGGTGGCTAAGATCCTCTG
TTGGCTTCCAAGATTTTCGTTTTGATTTTGCCAAAGGTTATGCTTCGAAGTATGTAAAGG
AATATATCGAGGGAGCTAAGCCAATATTTGCAGTTGGAGAATACTGGGACACTTGCAATT
ACAAGGGCAGCAATTTGGATTACAACCAAGATAGTCACAGGCAAAGAATCATCAATTGGA
TTGATGGCGCGGGACAACTTTCAACTGCATTCGATTTTACAACAAAAGCAATCCTTCAGG
AAGCAGTTAAAGGAGAATTCTGGCGTTTGCGCGACTCTAAGGGGAAACCACCAGGAGTTT
TAGGATGGTGGCCTTCAAGGGCTGTCACTTTTATTGATAATCACGACACTGGATCAACTC
AGGCGCACTGGCCTTTCCCTTCACATCATGTTATGGAGGGCTATGCATACATTCTAACGC
ACCCAGGGATACCATCAGTTTTCTATGACCATTTCTACGAATGGGATAATTCCATGCATG
ACCAAATTGTAAAGCTGATTGCTATTCGGAGGAATCAAGGCATACACAGTCGTTCATCTA
TAAGGATTATTGAGGCACAGTCAAACTTATACGCTGCAACCATTGATGAAAAGGTTAGCA
TGAAGATCGGGGACGGATCATGGTGCCCTGCTGGGAAAGAGTGGACTCTCGCGACCAGTG
GCCATCGCTATGCAGTCTGGCAGAAGTAATCTTATATATATGTGTGTGTGTTTCAAACCC
GTGCACCTACTTCTAATACTGGATCCGCCTCTATAGGTTTGGTTGGAGTGATGACTTTTT
TTTTTATTTCTGTTCATTAGACATTGCAGAAAGGTAATAAAAGTGTTCTTGAATGCAATG
TAATAAGGAGGTTCAGGTTTATTTATTCAGTTATCGTTTTGTATGAGGGAAGAAGCCATT
TTCATGTCAGAAAGATCAAAGGATTGTCTTTTGTTTCTCATATAAAA