Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g081730.3.1
CDS Infomation

JHL20J20.12 protein, putative (AHRD V3.3 *** A0A061FCM3_THECC)
Sequence

ATGTCTCGGTGCTTCCCATACCCACCACCTGGCTATTCGCTGAATAGATCCAGCAATGAA
GCCTTGATCGAATCGATTAAGCTCCAAAAGGAGAGGGAGGTAGCTAAAGCAGAAAAGAAG
GACAGGAAGAGGGAAAAGAAAGAAAAGAAAAGAGAAGAGAAGAAGGCTAAAAAGGAGAAG
AGTAATCTTGGATTTGGCAAGGCCACTCATGAGTCCAAAGGGAAGTACTTGTTCAAATGT
TTCGAAGATGAACCTGAGCAGTTGGAGAGGAGCAATCTCACTGAGGAACATGAGCCTGCT
GTGTGTTCACAGAATTCCAGCTGCTCATCCGACAGCACCCAGAACAGTAATAAAAGGAAG
AGGCCTACTTCACCTTCACCTTCACGAGGTGGCATACAGGCGCATGGTAGCATTATCAGA
ATTAGATTGTCTAAAAAGGGTGTGCAAGGTGAAATATCAGTATCCAAAGAGAAGCACTTG
CCAAAACCTGCTCAACAAGTTGCGGAAGTTACTGTCAGGACATCTGCCGAAAGAGCCAAC
CCTTTGTTGAAAACTACAAACAAACGAAGTTGTCCTCCTCCTGTAGCAGTTTCAGAGCCA
AGTACATCCAATTGTGGGTGGGTTGACCGTGTGGCTGAAGACAACGCAACTCCATCTTGT
TCCAAAGTGCACGAGAACAGCATAGAGTTTCAGTACAAGAATTTGATTGAGAACTGGCTT
CCACCAAGTCTGCCAAGTGATAATCTAGATTTGGAGGATGATCAATCATGGCTGTTTCAA
AGAAAACCTAAGCAAGCTCGAGTTGAGGAAAAAAACTTAGGCGGCGGTGACAAAACTTGT
GGAAGCTGCAGTTCATTGTGGCAGCAGCCACGGGCACAATACCTTCCTGATGTTGAGTTG
TATGCATTGCCCTACACAGTTCCTTTTTGA

Peptide Sequence

PEP ID

Solyc04g081730.3.1
PEP Infomation

JHL20J20.12 protein, putative (AHRD V3.3 *** A0A061FCM3_THECC)
Sequence

MSRCFPYPPPGYSLNRSSNEALIESIKLQKEREVAKAEKKDRKREKKEKKREEKKAKKEK
SNLGFGKATHESKGKYLFKCFEDEPEQLERSNLTEEHEPAVCSQNSSCSSDSTQNSNKRK
RPTSPSPSRGGIQAHGSIIRIRLSKKGVQGEISVSKEKHLPKPAQQVAEVTVRTSAERAN
PLLKTTNKRSCPPPVAVSEPSTSNCGWVDRVAEDNATPSCSKVHENSIEFQYKNLIENWL
PPSLPSDNLDLEDDQSWLFQRKPKQARVEEKNLGGGDKTCGSCSSLWQQPRAQYLPDVEL
YALPYTVPF*

Transcript Sequence

Transcript ID

Solyc04g081730.3.1
Transcript Infomation

JHL20J20.12 protein, putative (AHRD V3.3 *** A0A061FCM3_THECC)
Sequence

ACCTGATTATGTGATACACATTTCCTTGTTTATTCATCACCGCCTCTTTCAATATTCTGT
GAGAGACGCCGTAACCTAATTCTAGGGTTTCCAGAAATTTTTGATTCTGCGATTCAATCA
CAAGTAATCGTTTGTATCGCGCCAAATCGATCTGAAATCTGAACCATAGTGTTGTATTTT
TTGCGATTTATTTTTGTTTTTTGGTAAAGAAAGGGAGGGAAGTCTCAGATCTGAAATCGA
AAAGGGATTTGTCTGTGTATTGAGGATGTCTCGGTGCTTCCCATACCCACCACCTGGCTA
TTCGCTGAATAGATCCAGCAATGAAGCCTTGATCGAATCGATTAAGCTCCAAAAGGAGAG
GGAGGTAGCTAAAGCAGAAAAGAAGGACAGGAAGAGGGAAAAGAAAGAAAAGAAAAGAGA
AGAGAAGAAGGCTAAAAAGGAGAAGAGTAATCTTGGATTTGGCAAGGCCACTCATGAGTC
CAAAGGGAAGTACTTGTTCAAATGTTTCGAAGATGAACCTGAGCAGTTGGAGAGGAGCAA
TCTCACTGAGGAACATGAGCCTGCTGTGTGTTCACAGAATTCCAGCTGCTCATCCGACAG
CACCCAGAACAGTAATAAAAGGAAGAGGCCTACTTCACCTTCACCTTCACGAGGTGGCAT
ACAGGCGCATGGTAGCATTATCAGAATTAGATTGTCTAAAAAGGGTGTGCAAGGTGAAAT
ATCAGTATCCAAAGAGAAGCACTTGCCAAAACCTGCTCAACAAGTTGCGGAAGTTACTGT
CAGGACATCTGCCGAAAGAGCCAACCCTTTGTTGAAAACTACAAACAAACGAAGTTGTCC
TCCTCCTGTAGCAGTTTCAGAGCCAAGTACATCCAATTGTGGGTGGGTTGACCGTGTGGC
TGAAGACAACGCAACTCCATCTTGTTCCAAAGTGCACGAGAACAGCATAGAGTTTCAGTA
CAAGAATTTGATTGAGAACTGGCTTCCACCAAGTCTGCCAAGTGATAATCTAGATTTGGA
GGATGATCAATCATGGCTGTTTCAAAGAAAACCTAAGCAAGCTCGAGTTGAGGAAAAAAA
CTTAGGCGGCGGTGACAAAACTTGTGGAAGCTGCAGTTCATTGTGGCAGCAGCCACGGGC
ACAATACCTTCCTGATGTTGAGTTGTATGCATTGCCCTACACAGTTCCTTTTTGAATCAC
ATAACCGTGTGTATAGAAGATGTTTTAGCTGGATATACTGCTCAGGGAATTTTGTAGCTC
TTCTCTGGGAACTGATGTAGTTTGAACAGGATTTAGGCGCGATGACAAAAATGTTCTTTT
TTATTTTTTAGCTGCCAGTTGCTATCTTCAGAAATCCATTGTTCTACATCAATGAAAATG
ATCAATATAGTATTGGATATTTTCTTTCTCAAATACTCGTTTATTGGATACTTGTGTTAT
TCTGTGTTATATCTTTATTCATTTGGTTCACTTCACATTTGAAACCATATCATTGGTGTG
AACATTTAGTGGCTTTTGCATTTCTTATTTAAATCCATATCTGCTGGGAATAAGGTTTAC
AAATACTTCAATTTAGATATATGCGTATAACAAATGTGTTCAATCTTGTATTAAAGTGGT
TTTCTTGTTTATAGTCAAAGGTCTCCTACTATTGTAAAGAGGGATGTCACTTGAGTTTAT
GAAAAGAATTTGAATTTTTTTTCTTCACGAGTGTCGGTATGAAACGTTTATGCGAATCGT
CTGATAAAAGTGTAGTTGAGTTTTCTGAGGACATCATATTGAAATATTACATCGTTTGCC
TTCAAAATCTCTTGCAAAGTTTGAATGTGTGAGTAAGCATTGGCGGAGATGTATTGCTGA
TCCATCTTTGGTTTATAGTTGTCGTTCTCAACGATGGAGTCCTCACCGCTACATGATAGG
TTTCTTTTGTCAAAGTAGAGTTTTGATTCAAGAAAATAATTTTTTCTTTTCGTCTACTAA
ATCATCACAAATGATTGATGGTGGTTTAGAAAAGTGTCAATTTTCTTTGGCAGGGGATTG
TATATTATTGCATCCTCTAATGGGCTGAGGATTTAAAATATCAGAGGGTTTATTGTGTTT
ATAATCCATTTGGCAGCAATTTTCAGTGCAAATCATGTCCTCCATGACCCTTCCTGCTAC
TGGATTTCATTGTAAAGTCGATGACCCTGAAAATGATGTTATAGTTCGTTATGAAACCTG
GTTTAATCTACTTCCGAGTAAAGTTTCTCTTCCGAAACTAACATGTGGTCTTCCATAGAT
ATGACGCTAGTTGTACCTATCACAGTCATACTTTATAGATGGATGAAATTCGATGGAGTA
TTGATGTATGATATTATTGTTTACTTATGAATGGCCGCGTCTTCTCTAAAAACTATCTTT
CAACATACAAGTGAAAGTCTACTATCTAAATCTGTATAGTTCATATATATATCCAGCCCA
GGAAATTTTGTAGCTCTTCAAACAGATCCCTGAATTTAAGTCACATTCATCCAATATTAT
TTTAACTTGTAATTATTAACATGAGTTGGTAGAAAAATCAAATACTACCTTAAATACGTT
ATTACATTTGAATAGGAGTTTCAACTTGGCATATTTAATAACATTGGGATTTGGTGTTTA
AATTCATGTATAAATCGGATTTAGGTTTTCCATTTCTTGGCAGGGGATTGTATATTATTG
CATCCTAGTTAATGGGCTGAGGATTTATGAATAGTATGCAGATTTAACTAATGCAATTGT
CCAGTGGTTTTAGAAGCAGCTTTTGTGATGATGGTGGGCTAATCCACACATCTTTTATCT
GGATATAAATGGTACGGTTATTTCATACGACAGGAAAAAGAATATTGCCCAGTTTGTGTA
TGATATCGCACCACAAGACAACTTATTCTTTACTTATGAGTGGGCCGCGTAGTCTTCTCG
ATATCTAATTAATTATATCTTTAACAAACAAAAAAACCTTCTTATGAAATTGAATAGTAT
TTCCTAACATTGTTCGATTGGATACGAAATTTAAGAAATAAGAAAGAGTTACTTACTTAC
TTGTAGACGATAAGGTTATTTTCAGTACTTCTTATTCTTTTCATATGAGTGGAGTGGAAG
AAGAGTGAATTTTTGGTTTATCTTGCATTTTATTGTTAAGATATAGTGCAATATTTCTAA
TTTTGCAAGTACTATTAGTTTTACGTTTTTTTGTCTTGTGTGAGATATTAATACTATGCA
TTTCCTTTGTTTTGGGATTTTCATAAGTTTAAGATATTATAATATTACTATTGTTAGATG
ATGAAAATGAGTGTTGACATATCGCTAGACCAGTTAAAATTTTAATATGATAGGATGAGA
GATTTTCATAAATAATCTTTCTACTTCAATAGGTAAAGGCATATACTCTATCTTCCGTAA
ATTCGACTTATAAAATACACAGTATTGTAGGAGACTAGTGGCATAGTAAGATGAAAAGTG
TCCAAGCATTGAGTATGTAATTCTTTTTCTTTT