Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc04g081580.3.1
CDS Infomation	RNA helicase DEAD15
Sequence	ATGGCTACCGATTTCTCGTTTGAACAACCCAGCGATGAAGAAGTTGAATATGAGGAGAAT GATGACAGTGAAGAAGAAGAACATGAAGTGGATGAAGATAATGAAGATGCCGACCCCAAA CCTCGAACGAATAAGAAGCCGCAATCTCCATGGGACTTCTCTTCTTACTCTGAATCCGTT GCTGATGAACACAGCCACCGTAGAACAACTTCAATTGATTTCAAAATATCTAAGGCTCGT CAACAACTCTCTGCTCCTATAGCTAAACCAATCGAGGAAGATTCCGATTCCGACGATTCA GAACCTCACCGCCAGGAAGAGTACAGACCCGACGATGAAGATGGAGATGATGACGTAGAT ACGCATGTTGAAAAGAAACCATTTTTCGCCTCATCAGAAGGAGTTACATTTCATGCAAAT TCGTTTATTGAGCTCCATATCTCTAGGCCGTTGCTTCGGGCTTGTGAAGCATTGGGTTAC AGTAAGCCTACCCCAATTCAGGCGGCTTGCATTCCACTGGCTTTAACCGGTCGAGATATA TGCGGTAGTGCTATAACAGGATCTGGAAAGACAGCTGCCTTTGCCTTACCGACACTCGAG AGACTGTTGTACCGTCCAAAAAATAGGCCTGCAATTAGGGTTCTTATTCTTACTCCAACA AGAGAGTTGGCTGTTCAGGTTCATAGTATGATAGGTAAACTTGCCCAGTTTATGCCAGAT ATCAGATGTTGTTTGGTTGTTGGTGGTCTGTCAACCAAGGTGCAAGAGGCAGCCTTGAGA ACAATGCCTGATATTGTCGTGGCCACTCCAGGACGTATGATAGATCATCTACGGAACTCC ATGTCAGTTGATTTGGATGATCTTGCAGTATTGATTCTTGATGAGGCCGATCGTCTACTG GAGCTGGGTTTCAGTGCTGAAATTCGTGAGCTGGTTAGATTGTGTCCGAAGCGGAGACAG ACCATGTTGTTTTCTGCGACAATGACTGAGGAAGTTGATGAGCTCATCAATCTCTCACTG AATAAACCTTTGCGCCTGTCAGCTGATCCATCTACAAAACGGCCTGCAACATTGACTGAA GAGGTAGTTAGAATACGGCGCATGCGTGAAGGAAATCATGAAGCTGTTCTCCTTGCACTG TGCACCAAGACTTTCACTTCCAAAGTGATTGTTTTCAGTGGTACAAAGCAAGCAGCTCAT CGGTTGAAAATTATATTTGGTTTACTTGGTTTCAAAGCAGCTGAGCTACATGGAAATCTT ACGCAAGCCCAGCGTCTAGATGCTTTGGAACTTTTCAGAAGACAGGAAGTGGATTTTTTG ATTGCAACCGATGTTGCAGCTCGTGGACTTGACATTATTGGTGTTCAAACTGTTATAAAT TTTGCGTGCCCACGTGATCTTACTAGTTACGTTCATCGAGTGGGTCGGACAGCTAGAGCT GGTAGAGAAGGTTATGCCGTTACATTTGTCACAGATAATGATAGGTCTCTTCTAAAAGCC ATTGTTAAACGAGCTGGTTCAAGGCTAAAGAGTCGAATTGTAGCAGAACAATCTATAACT AAGTGGGCACAAGTGATTGAACAACTTGAGGATCAAGTGTCTGCAGTTATGCAAGAAGAG AGGGAAGAGATGGCACTAAGAAAAGCTGAAATGGAAGCAAATAAGGCAGAGAATATGATT GCCCACAGGGATGAGATTTATTCACGTCCTAAAAGGACATGGTTTGTCACAGAAAAGGAG AAAAAGCTAGTCCAAAAGGCAGCAAAGGAGAATGCAGCAGCCAAAGAAAATGGTTCTCAG AGTAAGGTAATGAGTGCCGAACAAGCAGAAGACCTGAAGATGAAGGAAAAGAGGAAGCGA GAACGAGAGAAAAATCTGCCGAGGAAGAAAAGAAGGAAGTTGGAGGCTGCTCGAGAGCAA TTAGAAGATGAAGATGACTTGGATGATGGCAAAGACAAATCAAAGAAAGAGAAATCTGGA ATTTCCTTAGTTGATCTTGCTTATCGTCGTGCAAAAGCAGTCAAGGCTGTGAACAAGGCA GTTGATGCTGGCAAGATTGTTAGGAAGGCCGGAAATAAACCAAAACCGAAAAGCAGAGCA TCTGAATCAAGGACAGAAGAAATGCAGGATATTTTTCAAAATGATACGAGTGAGAGAAAA CAAAGAAAACCACTTCATGCCGGTGGAAAGAAGAAGTCCTCATTCAAGAGCAAGTCACGG TACAAGAGGAGGTAA

Peptide Sequence

PEP ID	Solyc04g081580.3.1
PEP Infomation	RNA helicase DEAD15
Sequence	MATDFSFEQPSDEEVEYEENDDSEEEEHEVDEDNEDADPKPRTNKKPQSPWDFSSYSESV ADEHSHRRTTSIDFKISKARQQLSAPIAKPIEEDSDSDDSEPHRQEEYRPDDEDGDDDVD THVEKKPFFASSEGVTFHANSFIELHISRPLLRACEALGYSKPTPIQAACIPLALTGRDI CGSAITGSGKTAAFALPTLERLLYRPKNRPAIRVLILTPTRELAVQVHSMIGKLAQFMPD IRCCLVVGGLSTKVQEAALRTMPDIVVATPGRMIDHLRNSMSVDLDDLAVLILDEADRLL ELGFSAEIRELVRLCPKRRQTMLFSATMTEEVDELINLSLNKPLRLSADPSTKRPATLTE EVVRIRRMREGNHEAVLLALCTKTFTSKVIVFSGTKQAAHRLKIIFGLLGFKAAELHGNL TQAQRLDALELFRRQEVDFLIATDVAARGLDIIGVQTVINFACPRDLTSYVHRVGRTARA GREGYAVTFVTDNDRSLLKAIVKRAGSRLKSRIVAEQSITKWAQVIEQLEDQVSAVMQEE REEMALRKAEMEANKAENMIAHRDEIYSRPKRTWFVTEKEKKLVQKAAKENAAAKENGSQ SKVMSAEQAEDLKMKEKRKREREKNLPRKKRRKLEAAREQLEDEDDLDDGKDKSKKEKSG ISLVDLAYRRAKAVKAVNKAVDAGKIVRKAGNKPKPKSRASESRTEEMQDIFQNDTSERK QRKPLHAGGKKKSSFKSKSRYKRR*

Transcript Sequence

Transcript ID	Solyc04g081580.3.1
Transcript Infomation	RNA helicase DEAD15
Sequence	TTTACTATTGATGTCTAGGTTATACGAATTCGGGTCAAAATTCTTAAACCCTGCAACTCA ATGCACAGATTCTTAAACCCTCACAAAATCAGCAGTCATCCAGGTATCAATGGCTACCGA TTTCTCGTTTGAACAACCCAGCGATGAAGAAGTTGAATATGAGGAGAATGATGACAGTGA AGAAGAAGAACATGAAGTGGATGAAGATAATGAAGATGCCGACCCCAAACCTCGAACGAA TAAGAAGCCGCAATCTCCATGGGACTTCTCTTCTTACTCTGAATCCGTTGCTGATGAACA CAGCCACCGTAGAACAACTTCAATTGATTTCAAAATATCTAAGGCTCGTCAACAACTCTC TGCTCCTATAGCTAAACCAATCGAGGAAGATTCCGATTCCGACGATTCAGAACCTCACCG CCAGGAAGAGTACAGACCCGACGATGAAGATGGAGATGATGACGTAGATACGCATGTTGA AAAGAAACCATTTTTCGCCTCATCAGAAGGAGTTACATTTCATGCAAATTCGTTTATTGA GCTCCATATCTCTAGGCCGTTGCTTCGGGCTTGTGAAGCATTGGGTTACAGTAAGCCTAC CCCAATTCAGGCGGCTTGCATTCCACTGGCTTTAACCGGTCGAGATATATGCGGTAGTGC TATAACAGGATCTGGAAAGACAGCTGCCTTTGCCTTACCGACACTCGAGAGACTGTTGTA CCGTCCAAAAAATAGGCCTGCAATTAGGGTTCTTATTCTTACTCCAACAAGAGAGTTGGC TGTTCAGGTTCATAGTATGATAGGTAAACTTGCCCAGTTTATGCCAGATATCAGATGTTG TTTGGTTGTTGGTGGTCTGTCAACCAAGGTGCAAGAGGCAGCCTTGAGAACAATGCCTGA TATTGTCGTGGCCACTCCAGGACGTATGATAGATCATCTACGGAACTCCATGTCAGTTGA TTTGGATGATCTTGCAGTATTGATTCTTGATGAGGCCGATCGTCTACTGGAGCTGGGTTT CAGTGCTGAAATTCGTGAGCTGGTTAGATTGTGTCCGAAGCGGAGACAGACCATGTTGTT TTCTGCGACAATGACTGAGGAAGTTGATGAGCTCATCAATCTCTCACTGAATAAACCTTT GCGCCTGTCAGCTGATCCATCTACAAAACGGCCTGCAACATTGACTGAAGAGGTAGTTAG AATACGGCGCATGCGTGAAGGAAATCATGAAGCTGTTCTCCTTGCACTGTGCACCAAGAC TTTCACTTCCAAAGTGATTGTTTTCAGTGGTACAAAGCAAGCAGCTCATCGGTTGAAAAT TATATTTGGTTTACTTGGTTTCAAAGCAGCTGAGCTACATGGAAATCTTACGCAAGCCCA GCGTCTAGATGCTTTGGAACTTTTCAGAAGACAGGAAGTGGATTTTTTGATTGCAACCGA TGTTGCAGCTCGTGGACTTGACATTATTGGTGTTCAAACTGTTATAAATTTTGCGTGCCC ACGTGATCTTACTAGTTACGTTCATCGAGTGGGTCGGACAGCTAGAGCTGGTAGAGAAGG TTATGCCGTTACATTTGTCACAGATAATGATAGGTCTCTTCTAAAAGCCATTGTTAAACG AGCTGGTTCAAGGCTAAAGAGTCGAATTGTAGCAGAACAATCTATAACTAAGTGGGCACA AGTGATTGAACAACTTGAGGATCAAGTGTCTGCAGTTATGCAAGAAGAGAGGGAAGAGAT GGCACTAAGAAAAGCTGAAATGGAAGCAAATAAGGCAGAGAATATGATTGCCCACAGGGA TGAGATTTATTCACGTCCTAAAAGGACATGGTTTGTCACAGAAAAGGAGAAAAAGCTAGT CCAAAAGGCAGCAAAGGAGAATGCAGCAGCCAAAGAAAATGGTTCTCAGAGTAAGGTAAT GAGTGCCGAACAAGCAGAAGACCTGAAGATGAAGGAAAAGAGGAAGCGAGAACGAGAGAA AAATCTGCCGAGGAAGAAAAGAAGGAAGTTGGAGGCTGCTCGAGAGCAATTAGAAGATGA AGATGACTTGGATGATGGCAAAGACAAATCAAAGAAAGAGAAATCTGGAATTTCCTTAGT TGATCTTGCTTATCGTCGTGCAAAAGCAGTCAAGGCTGTGAACAAGGCAGTTGATGCTGG CAAGATTGTTAGGAAGGCCGGAAATAAACCAAAACCGAAAAGCAGAGCATCTGAATCAAG GACAGAAGAAATGCAGGATATTTTTCAAAATGATACGAGTGAGAGAAAACAAAGAAAACC ACTTCATGCCGGTGGAAAGAAGAAGTCCTCATTCAAGAGCAAGTCACGGTACAAGAGGAG GTAAACACTTGCAAAAAACCATGACAATCATCTGGAAATCAAGTTACTGAAACGAGGTAG ACTCATCAAACATGACTACCCCATCGTAACAAAGGATGGATTATGTAAACACTTACTCGA GATCTCACTTATCAGATTCCCCCGTGGAAGACAATTTAGTCTGAAGAATTCGCCCCGACT TGTACCAAGACAAGTAGCTTCTTAGAGTGTTGCTGATATTGAGCTTGTAGCTTTATTTTA AGAGTAGGTCCCCAGTTCTTAGTTTCAGTTTTGCAGAGAGTGTATTTTATCTCATTAGTA TTTGTTTTGTTTAAGACTGAGTACTCGATGCATCTGTACATGTATTCGATTTTGACAAAT ATTTACGATATTGTTGCTAATATCTTCACCAAAATGAATTCTAATTTTCTCCTTGTCGTT TTTCATTAAAAATAATAATTAATTAGTGTATTTTCTT