Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g081520.2.1
CDS Infomation

SKU5 similar 18 (AHRD V3.3 *** AT1G75790.1)
Sequence

ATGATCAATAATCAGTTTCCAGGGCCCCTTTTGAACACAACAACAAATGATGTGGTCATT
GTCAATGTTTATAACAACTTGACTGAACCTTTCCTCATGACATGGAATGGAGTGCAATTA
AGGAGGAATTCATGGCAAGATGGAGTTGAAGGAACCAATTGTCCAATTATGCCTGGAAAA
AATTGGACATACAAATTTCAGATGAAAGATCAGATTGGAAGTTTCTTCTATTTTCCTTCA
CTCTTTTTCCAGAAAGCTGCTGGAGGCTATGGTCCTATTCGAATCAACAACGTTGAGACT
GTTCCTCTTCCATTTACGCGTCCTGATTATGAATATGATATACTAATTGGAGATTGGTAT
TTTGATGAGTATAAGGACTTGAGAATTTCTCTAGAAGATGGATGCAAAATGCCTTTTCCA
GATGCCATTCTCATCAATGGTATGAGATCTGATCAAGCTACCTTTGAGTTTCAACCCGGG
GCTACCTATAGATTGAGAATCTCGAACATAGGATTAAAAACAACCTTAAATTTCAAAATC
CAGGATCATGAAATGCTTTTGGTGGAGACTGAAGGAGCCTACACTTCAAAAAAGTACCAC
CAAAGTCTAGACATCCATGTTGGTCAATCTTATTCTGTTCTTGTTACTGCAAAGAACCAC
AGCTATAATAGCTCGTATCATATGGTGGCCTCTTCGCGATTCATCCCCAGGAAACTTTCA
GGTCTTGCTATTATACGATATCCCAATTTTGATGTTGAACCCTTGGTTGCTGTTTACCCT
GATGAACCTTCTCAGGACGAGTTCAGATTTTCACTGGAACAAGCTCTATCAATAAGGACA
GATTTATTAGTAGGAGCTGCGAGGCGTAATCCTCAAGGATCTTATGTATATGGAAGCATT
AACATAAGCCGGACACTGATCCTCCAGAACGGTGAGGCAGCGTTGGATGGACAAAATCGA
TACACAGTGAATGGGGTATCGTTTTTGCACCCGAGAACACCACTGAAGCTGGCAGATTAT
TTCCAGCTAAGTGATGTTTTCGAGCCTGGTTTTCTTCCTGCTTCACCAGTAGATGATGTT
CCTAGACTTGGTATCTCAGTCATTGATGCCAATTATCATGATTTTGTTCATATTGTTTTC
CAAAATCCGTTAGACTCGTTACAAACGTGGCATTCTGATGGATACAACTTCTTTGTTGTC
GGAATGGGACGCGGTAAATGGGAGGTGGAAAAGATGGAAACATACAATATGATTGATGCT
ATTTATCGCTCAACGATTCAGGTGTATCCATATTCATGGACCGCGATACTAATAAAGTTG
GACAATCAAGGGATGTGGAATCTGAGATCACAGGATGCAGAAAAATGGTATCTTGGACAA
GAATTGTATATAAAAGTGAAAGGAGATGTGAATGATCCTTCCAAGATTTCTCCAAGAGAT
GAAGCTCCAATTCCTGCAAATGTTATTAAATGTGGAAAAGTTGCTGATTTATAA

Peptide Sequence

PEP ID

Solyc04g081520.2.1
PEP Infomation

SKU5 similar 18 (AHRD V3.3 *** AT1G75790.1)
Sequence

MINNQFPGPLLNTTTNDVVIVNVYNNLTEPFLMTWNGVQLRRNSWQDGVEGTNCPIMPGK
NWTYKFQMKDQIGSFFYFPSLFFQKAAGGYGPIRINNVETVPLPFTRPDYEYDILIGDWY
FDEYKDLRISLEDGCKMPFPDAILINGMRSDQATFEFQPGATYRLRISNIGLKTTLNFKI
QDHEMLLVETEGAYTSKKYHQSLDIHVGQSYSVLVTAKNHSYNSSYHMVASSRFIPRKLS
GLAIIRYPNFDVEPLVAVYPDEPSQDEFRFSLEQALSIRTDLLVGAARRNPQGSYVYGSI
NISRTLILQNGEAALDGQNRYTVNGVSFLHPRTPLKLADYFQLSDVFEPGFLPASPVDDV
PRLGISVIDANYHDFVHIVFQNPLDSLQTWHSDGYNFFVVGMGRGKWEVEKMETYNMIDA
IYRSTIQVYPYSWTAILIKLDNQGMWNLRSQDAEKWYLGQELYIKVKGDVNDPSKISPRD
EAPIPANVIKCGKVADL*

Transcript Sequence

Transcript ID

Solyc04g081520.2.1
Transcript Infomation

SKU5 similar 18 (AHRD V3.3 *** AT1G75790.1)
Sequence

TTTTACAATTTCTACTTTTGTTAGTGTCCATTCAAAACTACTTCACTTTGATTGGGTTGT
TTCAATTTCCTCTAATGCACTCATTGGAGATCCTAAAGAGGTTATTATGATCAATAATCA
GTTTCCAGGGCCCCTTTTGAACACAACAACAAATGATGTGGTCATTGTCAATGTTTATAA
CAACTTGACTGAACCTTTCCTCATGACATGGAATGGAGTGCAATTAAGGAGGAATTCATG
GCAAGATGGAGTTGAAGGAACCAATTGTCCAATTATGCCTGGAAAAAATTGGACATACAA
ATTTCAGATGAAAGATCAGATTGGAAGTTTCTTCTATTTTCCTTCACTCTTTTTCCAGAA
AGCTGCTGGAGGCTATGGTCCTATTCGAATCAACAACGTTGAGACTGTTCCTCTTCCATT
TACGCGTCCTGATTATGAATATGATATACTAATTGGAGATTGGTATTTTGATGAGTATAA
GGACTTGAGAATTTCTCTAGAAGATGGATGCAAAATGCCTTTTCCAGATGCCATTCTCAT
CAATGGTATGAGATCTGATCAAGCTACCTTTGAGTTTCAACCCGGGGCTACCTATAGATT
GAGAATCTCGAACATAGGATTAAAAACAACCTTAAATTTCAAAATCCAGGATCATGAAAT
GCTTTTGGTGGAGACTGAAGGAGCCTACACTTCAAAAAAGTACCACCAAAGTCTAGACAT
CCATGTTGGTCAATCTTATTCTGTTCTTGTTACTGCAAAGAACCACAGCTATAATAGCTC
GTATCATATGGTGGCCTCTTCGCGATTCATCCCCAGGAAACTTTCAGGTCTTGCTATTAT
ACGATATCCCAATTTTGATGTTGAACCCTTGGTTGCTGTTTACCCTGATGAACCTTCTCA
GGACGAGTTCAGATTTTCACTGGAACAAGCTCTATCAATAAGGACAGATTTATTAGTAGG
AGCTGCGAGGCGTAATCCTCAAGGATCTTATGTATATGGAAGCATTAACATAAGCCGGAC
ACTGATCCTCCAGAACGGTGAGGCAGCGTTGGATGGACAAAATCGATACACAGTGAATGG
GGTATCGTTTTTGCACCCGAGAACACCACTGAAGCTGGCAGATTATTTCCAGCTAAGTGA
TGTTTTCGAGCCTGGTTTTCTTCCTGCTTCACCAGTAGATGATGTTCCTAGACTTGGTAT
CTCAGTCATTGATGCCAATTATCATGATTTTGTTCATATTGTTTTCCAAAATCCGTTAGA
CTCGTTACAAACGTGGCATTCTGATGGATACAACTTCTTTGTTGTCGGAATGGGACGCGG
TAAATGGGAGGTGGAAAAGATGGAAACATACAATATGATTGATGCTATTTATCGCTCAAC
GATTCAGGTGTATCCATATTCATGGACCGCGATACTAATAAAGTTGGACAATCAAGGGAT
GTGGAATCTGAGATCACAGGATGCAGAAAAATGGTATCTTGGACAAGAATTGTATATAAA
AGTGAAAGGAGATGTGAATGATCCTTCCAAGATTTCTCCAAGAGATGAAGCTCCAATTCC
TGCAAATGTTATTAAATGTGGAAAAGTTGCTGATTTATAA