Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g081400.3.1
CDS Infomation

Phosphotransferase (AHRD V3.3 *** Q4PS96_SOLLC)
Sequence

ATGTCGGTCACCGTTAGCTCGCCGGCCGTCCGATCCTTCCATGTTTCACGATCACCTCAT
AAAACGATCTCTAGGCCACGTGTCATTATATCTGCCGTCCGATCTACTGACAGCTTAGGA
GTAGCACCAATTTTGACGAAGTTGCAGAAAGATTGTGCTACTCCTCTTCCAGTTTTGCGC
CACGTGGCGGATGCAATGGCCGATGATATGAGGGCCGGGCTTGCCGTCGACGGCGGCAGT
GATCTGAAGATGATCCTTAGTTATGTCGACACTCTACCAACTGGGAATGAGAAAGGCTTG
TTTTATGCGTTGGACCTTGGTGGTACAAATTTCCGGGTGCTAAGGGTGCAGCTAGGTGGT
AAAGAAGAGCGTGTAGTCGCCACTGAGTTTGAGCAAGTCTCTATACCCCAAGAACTGATG
TTTGCTACCTCCGAGGAGCTTTTCGATTTCATAGCTTCTGCGCTAGGAAAATTTGCACAA
AAGGAAGGTGGTAATTTTGAGTTGCAACAGGGACGGACAAGGGAAATAGGATTCACGTTT
TCTTTTCCGGTGAAACAGACTTCAATAAGAACTGGAATCCTAATCAAATGGACAAAAGGT
TTTGCTGTCTCTGGAACTGCGGGAAAAGATGTTGTTGCTTGTCTGAATGAAGCCATGGAG
AGGCGGGGAATGGATATGCAAGTGTCTGCCCTGGTCAATGACACTGTGGGAACACTTGCC
GGAGCAAGATACTGGGATGATGATGCCATGGTTGCTGTCATTCTTGGGACTGGAACCAAT
GCTTGCTATGTAGAACGTGTGGATGCTATTCCTAAGCTGGCAAAAAGGATGTCTAAGTCT
CCAATAACGATTGTGAATACCGAATGGGGAGCTTTCTCAAATGGCCTTCCTTTAACTGAG
TTTGATAGAGAAATGGATGCCGAGAGCATTAACCCTGGTGAGCAGATTTTTGAAAAGACC
ATCTCTGGTATGTACCTTGGGGAAATTGTGAGACGGGTGCTGGTCAAAATGGCCAAGGTT
GGGGGCTTATTTGGTAGCAGCTATGTTCCGGAAAAGCTAGTCACTCCATTTGTGCTGAGG
ACACCTGATATATGTGCCATGCAGCAGGATACATCAATAGATCTTGAAGCTGTTGAGTCT
GTCCTCTATGATGTAGCTGGGGTAAAATCCGATCTAAGTGCAAGGAAAACAGTCGTGGAC
ATTTGCGATACTATTGCAAAACGAGGGGGTCGTCTAGCTGGTGCAGGAATTGTTGGTATA
TTACAGAAAATGGAGGAAGATTCTAAAGGTCTCATCTTTGGTAAAAGAACAGTTGTAGCA
ATGGATGGAGGCTTATATGAGCACTATCCTCAGTACAGAGGATACCTCCAAGAAGCTGTC
ACAGAGCTACTAGGCTCGGAAATTTCGAAAAATGTAGTGATAGAACATTCAAAAGATGGA
TCTGGTATTGGAGCTGCATTATTAGCTGCTGCAAATTCAAAGTATGAACATGATGATTAA

Peptide Sequence

PEP ID

Solyc04g081400.3.1
PEP Infomation

Phosphotransferase (AHRD V3.3 *** Q4PS96_SOLLC)
Sequence

MSVTVSSPAVRSFHVSRSPHKTISRPRVIISAVRSTDSLGVAPILTKLQKDCATPLPVLR
HVADAMADDMRAGLAVDGGSDLKMILSYVDTLPTGNEKGLFYALDLGGTNFRVLRVQLGG
KEERVVATEFEQVSIPQELMFATSEELFDFIASALGKFAQKEGGNFELQQGRTREIGFTF
SFPVKQTSIRTGILIKWTKGFAVSGTAGKDVVACLNEAMERRGMDMQVSALVNDTVGTLA
GARYWDDDAMVAVILGTGTNACYVERVDAIPKLAKRMSKSPITIVNTEWGAFSNGLPLTE
FDREMDAESINPGEQIFEKTISGMYLGEIVRRVLVKMAKVGGLFGSSYVPEKLVTPFVLR
TPDICAMQQDTSIDLEAVESVLYDVAGVKSDLSARKTVVDICDTIAKRGGRLAGAGIVGI
LQKMEEDSKGLIFGKRTVVAMDGGLYEHYPQYRGYLQEAVTELLGSEISKNVVIEHSKDG
SGIGAALLAAANSKYEHDD*

Transcript Sequence

Transcript ID

Solyc04g081400.3.1
Transcript Infomation

Phosphotransferase (AHRD V3.3 *** Q4PS96_SOLLC)
Sequence

ACGGAACTTCATTGTCCTGCACTAAATTTAGTCAAGCAGAAAAGCTGTAATGCTCTCTGC
TACGGTTTAGTTTCAGCACTATGAAAGTAACGAACAGTTTTATAGTTAGCCAAATTCTTA
TATTCTTTCATTAAATCCTCACATCATTATTTTATTGAAATTCAACTGTTTTTCATCATT
ATTTTATTTGAAATTCAACTGTTCAAACAAACTTTTTTTTTTTTTCAAGTGTTAAAAGTT
GAGATCTTCAAACACTCTGTTTCAACGTCACCATTTATTGTCTCTCTTTTTTTCTCCGTC
ACACAATTGAATTGATCTCACTGTTACCTAAAATGTCGGTCACCGTTAGCTCGCCGGCCG
TCCGATCCTTCCATGTTTCACGATCACCTCATAAAACGATCTCTAGGCCACGTGTCATTA
TATCTGCCGTCCGATCTACTGACAGCTTAGGAGTAGCACCAATTTTGACGAAGTTGCAGA
AAGATTGTGCTACTCCTCTTCCAGTTTTGCGCCACGTGGCGGATGCAATGGCCGATGATA
TGAGGGCCGGGCTTGCCGTCGACGGCGGCAGTGATCTGAAGATGATCCTTAGTTATGTCG
ACACTCTACCAACTGGGAATGAGAAAGGCTTGTTTTATGCGTTGGACCTTGGTGGTACAA
ATTTCCGGGTGCTAAGGGTGCAGCTAGGTGGTAAAGAAGAGCGTGTAGTCGCCACTGAGT
TTGAGCAAGTCTCTATACCCCAAGAACTGATGTTTGCTACCTCCGAGGAGCTTTTCGATT
TCATAGCTTCTGCGCTAGGAAAATTTGCACAAAAGGAAGGTGGTAATTTTGAGTTGCAAC
AGGGACGGACAAGGGAAATAGGATTCACGTTTTCTTTTCCGGTGAAACAGACTTCAATAA
GAACTGGAATCCTAATCAAATGGACAAAAGGTTTTGCTGTCTCTGGAACTGCGGGAAAAG
ATGTTGTTGCTTGTCTGAATGAAGCCATGGAGAGGCGGGGAATGGATATGCAAGTGTCTG
CCCTGGTCAATGACACTGTGGGAACACTTGCCGGAGCAAGATACTGGGATGATGATGCCA
TGGTTGCTGTCATTCTTGGGACTGGAACCAATGCTTGCTATGTAGAACGTGTGGATGCTA
TTCCTAAGCTGGCAAAAAGGATGTCTAAGTCTCCAATAACGATTGTGAATACCGAATGGG
GAGCTTTCTCAAATGGCCTTCCTTTAACTGAGTTTGATAGAGAAATGGATGCCGAGAGCA
TTAACCCTGGTGAGCAGATTTTTGAAAAGACCATCTCTGGTATGTACCTTGGGGAAATTG
TGAGACGGGTGCTGGTCAAAATGGCCAAGGTTGGGGGCTTATTTGGTAGCAGCTATGTTC
CGGAAAAGCTAGTCACTCCATTTGTGCTGAGGACACCTGATATATGTGCCATGCAGCAGG
ATACATCAATAGATCTTGAAGCTGTTGAGTCTGTCCTCTATGATGTAGCTGGGGTAAAAT
CCGATCTAAGTGCAAGGAAAACAGTCGTGGACATTTGCGATACTATTGCAAAACGAGGGG
GTCGTCTAGCTGGTGCAGGAATTGTTGGTATATTACAGAAAATGGAGGAAGATTCTAAAG
GTCTCATCTTTGGTAAAAGAACAGTTGTAGCAATGGATGGAGGCTTATATGAGCACTATC
CTCAGTACAGAGGATACCTCCAAGAAGCTGTCACAGAGCTACTAGGCTCGGAAATTTCGA
AAAATGTAGTGATAGAACATTCAAAAGATGGATCTGGTATTGGAGCTGCATTATTAGCTG
CTGCAAATTCAAAGTATGAACATGATGATTAAGGGAAAAGCTAAATTTCATGTGTTCAAA
GGTTTGCTTGAGGAAAAATACATGAGCATTTGTAATTTAGAATGTTCTAAAGAAGGATTG
ATGATTGGATTTATAGAGGCTCTTGTTTGTGATGCCATTTTTTGTACTCCCATTAATGAA
GTACGAAGAAGTG