Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc04g081360.3.1
CDS Infomation	tRNA (Adenine-N(1)-)-methyltransferase non-catalytic subunit trm6 (AHRD V3.3 *** A0A151U6B3_CAJCA)
Sequence	ATGTCTATTGAAGAAGCAGTTGATGAGGATTCGAAGCAAAATCATAATAGTAGATTAACT TATGAAGGTTGCAATGTATTGCTTGACATCAATGATGGCGACCGTTTAGTTTTTTCTCGT CTTACTGCTGCCTCGACATTGAAAATTGGGAATAAGAAGTGTTCTCTTCAGCCTCTTATA GGTTGTCCATTCGGGTCTCTGTTTCAAGTGGAGCCGGGAAAAGAAGGAACCTTTTTGACT CGTTTTGTTGAGAATGCAGAAGGTAACGGCCTTGAAGAAAAAGACGTGGATGGATCTAAA GACAACCGTGCGCTTGTTGATAATAATACTGCTCAGAGTCTCACTAGTGAAGATATTGAC GAGATGCGAAAGCAGGGAGCAAAAGGGGATGAAATAGTTGAAGCACTCATTGCAAACAGT GCAACTTTTGAGAAGAAGACATTATTTTCACAAGATAAGTATAGGGTTAAGAAACAGAAG AAATATGCACCTCGAGTACTTTTGAGGCGCCCCTTTGCACGAAGCATTTGTGAGGCCTAC TTCAAGAAACATCCTGAAAAAATCGGATTCATGCGAGTGGATGCACTATCTCTACTGCTC TCCTTGGGGAATGTTACTGCAAATGCAGATGTACTTGTAGTGGACATGCTCAGTGGTATT CTTACTGGTGCTATTGCAGAACGACTTGGAGGTACTGGTTATGTGTGCAATACTTATCGT GGATCATCACCATATCCTGTCGATATCACAAGGATGTTTAATTTAAGCGATGAAATCTGT AAAAGAATCGTGCATGCATCACTGACCGACCTGAATTCATTTCAAACTGGAGCTTCAGTG TCTGAGGGTCAGGAAGAAACCTTACCTGTCACTCATTCTGGTGGTCTAGACGAAGTTAGT GTGCCAGCTGAAGATGGTGGCATGGATGTAACACCTGAGAGAGTTTCTTCTCCAATAATC AAGCCTGTTAAATCTATAAAAGCAGGTCAGAAAGCAACCCTCGAGGCCATCAAGTCGTGG AAAGAAAACGGTTTTTCCAGCCTAATAATTGCTGCTCCGGAACTGGACCCATGGGGCATT ATTAAAGAAGTGCTTCCTCTTTTATCATTTTCAGCTCCTTTTGCTGTTTATCACCAGTAT GCTCAGCCCCTAGCTACGTGTATGCACAACCTGCAGATTGAGAAAATGGCGATTGGATTA CAAATTTCTGAACCTTGGCTACGTGAATATCAGGTACTCCCATCAAGAACCCATCCACAT ATGCAGATGAGCGCGTTTGGTGGTTATATACTAAGTGGCACGAAAATATCGAGCAGTGAC TCCCTTACCAGCTCTAACTAG

Peptide Sequence

PEP ID	Solyc04g081360.3.1
PEP Infomation	tRNA (Adenine-N(1)-)-methyltransferase non-catalytic subunit trm6 (AHRD V3.3 *** A0A151U6B3_CAJCA)
Sequence	MSIEEAVDEDSKQNHNSRLTYEGCNVLLDINDGDRLVFSRLTAASTLKIGNKKCSLQPLI GCPFGSLFQVEPGKEGTFLTRFVENAEGNGLEEKDVDGSKDNRALVDNNTAQSLTSEDID EMRKQGAKGDEIVEALIANSATFEKKTLFSQDKYRVKKQKKYAPRVLLRRPFARSICEAY FKKHPEKIGFMRVDALSLLLSLGNVTANADVLVVDMLSGILTGAIAERLGGTGYVCNTYR GSSPYPVDITRMFNLSDEICKRIVHASLTDLNSFQTGASVSEGQEETLPVTHSGGLDEVS VPAEDGGMDVTPERVSSPIIKPVKSIKAGQKATLEAIKSWKENGFSSLIIAAPELDPWGI IKEVLPLLSFSAPFAVYHQYAQPLATCMHNLQIEKMAIGLQISEPWLREYQVLPSRTHPH MQMSAFGGYILSGTKISSSDSLTSSN*

Transcript Sequence

Transcript ID	Solyc04g081360.3.1
Transcript Infomation	tRNA (Adenine-N(1)-)-methyltransferase non-catalytic subunit trm6 (AHRD V3.3 *** A0A151U6B3_CAJCA)
Sequence	AAATATTTATTTGTTTAAATAACAGTTCCTGTTTTGTAAATTACCCATCGTTTAGGGTTC TAGGGTTTAAACTAACAGAGAACTGAAGCTTATAGTGTAACTTCCTTCTCTACTGCTTCA TCTAATGCTTAAAGATTGAATTTTTAGCAGCAAAAATGTCTATTGAAGAAGCAGTTGATG AGGATTCGAAGCAAAATCATAATAGTAGATTAACTTATGAAGGTTGCAATGTATTGCTTG ACATCAATGATGGCGACCGTTTAGTTTTTTCTCGTCTTACTGCTGCCTCGACATTGAAAA TTGGGAATAAGAAGTGTTCTCTTCAGCCTCTTATAGGTTGTCCATTCGGGTCTCTGTTTC AAGTGGAGCCGGGAAAAGAAGGAACCTTTTTGACTCGTTTTGTTGAGAATGCAGAAGGTA ACGGCCTTGAAGAAAAAGACGTGGATGGATCTAAAGACAACCGTGCGCTTGTTGATAATA ATACTGCTCAGAGTCTCACTAGTGAAGATATTGACGAGATGCGAAAGCAGGGAGCAAAAG GGGATGAAATAGTTGAAGCACTCATTGCAAACAGTGCAACTTTTGAGAAGAAGACATTAT TTTCACAAGATAAGTATAGGGTTAAGAAACAGAAGAAATATGCACCTCGAGTACTTTTGA GGCGCCCCTTTGCACGAAGCATTTGTGAGGCCTACTTCAAGAAACATCCTGAAAAAATCG GATTCATGCGAGTGGATGCACTATCTCTACTGCTCTCCTTGGGGAATGTTACTGCAAATG CAGATGTACTTGTAGTGGACATGCTCAGTGGTATTCTTACTGGTGCTATTGCAGAACGAC TTGGAGGTACTGGTTATGTGTGCAATACTTATCGTGGATCATCACCATATCCTGTCGATA TCACAAGGATGTTTAATTTAAGCGATGAAATCTGTAAAAGAATCGTGCATGCATCACTGA CCGACCTGAATTCATTTCAAACTGGAGCTTCAGTGTCTGAGGGTCAGGAAGAAACCTTAC CTGTCACTCATTCTGGTGGTCTAGACGAAGTTAGTGTGCCAGCTGAAGATGGTGGCATGG ATGTAACACCTGAGAGAGTTTCTTCTCCAATAATCAAGCCTGTTAAATCTATAAAAGCAG GTCAGAAAGCAACCCTCGAGGCCATCAAGTCGTGGAAAGAAAACGGTTTTTCCAGCCTAA TAATTGCTGCTCCGGAACTGGACCCATGGGGCATTATTAAAGAAGTGCTTCCTCTTTTAT CATTTTCAGCTCCTTTTGCTGTTTATCACCAGTATGCTCAGCCCCTAGCTACGTGTATGC ACAACCTGCAGATTGAGAAAATGGCGATTGGATTACAAATTTCTGAACCTTGGCTACGTG AATATCAGGTACTCCCATCAAGAACCCATCCACATATGCAGATGAGCGCGTTTGGTGGTT ATATACTAAGTGGCACGAAAATATCGAGCAGTGACTCCCTTACCAGCTCTAACTAGGATA AATTTTTTTGGCATCTCACTCTGCTTGGTTGTACATGTCGCTTGACGATACCATTTTCGT CTTTCGAGAATATTCCCTGTTAGAATAGATGTAGGGATTATCTTGTCTCTTTTCTGGGGC AGAAACAAGGTTACTCATGTTGTACTTTTATTCATTGATTGATGTATGCTTGCTTTTGTA TGAGCAATTCTTCTAAATCAAAAGACTAAAGGGTCTTTTTCCTCTTA