Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc04g081300.3.1
CDS Infomation	Endoglucanase (AHRD V3.3 *** K4BVK9_SOLLC)
Sequence	ATGGGAGAGAAATCAAAAAAAGGGGGTTGGTGTGGATGGATTATAGCTTTGGTAGTGGTT GCTGCGGCTGCTGGAGCCATTGTGGTACTTTTTATGAAGAAGCATAATGGTTCTGGCTCA GATGCTGCTTCTGGTGCTTCTGAAAAGAAATATGGAGATGCTTTGAAAATTGCAATGCAG TTCTTTGATGTCCAAAAATCTGGGAAATTGGTAAATAATAAGATATCATGGAGAGGCGAT TCAGCCGTCAAAGATGGAAGTCAAGAAAAGTTAGACCTCAGTCAAGGAATGTATGATGCT GGCGACCACATGAAATTTAATTTCCCAATGGCTTACACTGCCACTGTGTTGTCATGGGCC ATCCTTGAGTATGGTAATCAGATGAAGGGTGTGGGCCAGTTGGAACCTGCTGAAGACTCA CTCAAATGGATTACGGACTATCTTATCAATTGTCATCCAAAAGATGATGTTCTTTATATT CAGGTGGGTGATGCTGATGCTGACCATAAATGTTGGGACAGACCCGAGGACATGACTGAG GCAAGGCCTCTAATTCAGATAAATGCTTCTACCCCTGGAACAGAAGTTGCAGCTGAAACT GCTGCAGCTATGGCAGCAGCATCCCTGGTCTTCAAGTCGAAGAACTCAGCATACTCAAGT AACCTGCTTAAGCATGCTAAACAGTTGTTCACTTTTGCTGACAAACATAGAGGTACCTAC AGCGAAAATATTCCTGAAGTCGCAACATATTACAATTCAACTGGATATGGAGATGAGCTC TTGTGGGCAGCAAGTTGGCTATATCATGCAACTGGGGATCAAATATATTTTGATTACGCG ACTGGGAAAAATGCAGATTCTTTTGGTAATTTTGGAAATCCAACTTGGTTTAGCTGGGAT AACAAACTAGCTGGTACTCAGGTTCTTTTGTCCCGGGTCAGCTTCTTTAATTCGAAAGTC TCAAACTCAGACACACTTCAACAGTACAAAAAAACTGCAGAAGCTGTAATGTGTGGTCTC TTACCAAAATCTCCAACAGCTACATCCAGCAGAACTGATAGTGGTTTGATATGGATAACT GAATGGAACGCGTTGCAGCATCCTGTAGCCTCTGCCTTCTTAGCTGTGCTGTACAGTGAT TATATGCTCACTTCCAAGACTGATAAAATGACTTGTGATGGTAATGAGTATACACCATCT GATCTCAGAAAGTTCGCCATGTCCCAGGCCAATTATGTATTGGGTGACAATCCAGCAAAG ATGAGTTATCTCGTAGGCTATGGGGACAAATATCCGCAGTATGTTCACCACAGAGGGGCT TCCATTCCTACAGACGCCAATACTAATTGCAAAGAAGGTTGGAAGTATCTAGACTCAACT GAACCAAATCCTAACGTTGCAACTGGGGCTCTCGTTGGTGGTCCATTTCTTAATGAGACA TATATCGATTCAAGGAACAACTCGGTTCAAGGAGAGCCAACCACATACAATAGTGCTGTG GTTGTTGCCCTTCTTTCTGGTTTGGTTTCCACTTCCTCAGTGGTTCAATCTTTCACCTGA

Peptide Sequence

PEP ID	Solyc04g081300.3.1
PEP Infomation	Endoglucanase (AHRD V3.3 *** K4BVK9_SOLLC)
Sequence	MGEKSKKGGWCGWIIALVVVAAAAGAIVVLFMKKHNGSGSDAASGASEKKYGDALKIAMQ FFDVQKSGKLVNNKISWRGDSAVKDGSQEKLDLSQGMYDAGDHMKFNFPMAYTATVLSWA ILEYGNQMKGVGQLEPAEDSLKWITDYLINCHPKDDVLYIQVGDADADHKCWDRPEDMTE ARPLIQINASTPGTEVAAETAAAMAAASLVFKSKNSAYSSNLLKHAKQLFTFADKHRGTY SENIPEVATYYNSTGYGDELLWAASWLYHATGDQIYFDYATGKNADSFGNFGNPTWFSWD NKLAGTQVLLSRVSFFNSKVSNSDTLQQYKKTAEAVMCGLLPKSPTATSSRTDSGLIWIT EWNALQHPVASAFLAVLYSDYMLTSKTDKMTCDGNEYTPSDLRKFAMSQANYVLGDNPAK MSYLVGYGDKYPQYVHHRGASIPTDANTNCKEGWKYLDSTEPNPNVATGALVGGPFLNET YIDSRNNSVQGEPTTYNSAVVVALLSGLVSTSSVVQSFT*

Transcript Sequence

Transcript ID	Solyc04g081300.3.1
Transcript Infomation	Endoglucanase (AHRD V3.3 *** K4BVK9_SOLLC)
Sequence	ATGGGAGAGAAATCAAAAAAAGGGGGTTGGTGTGGATGGATTATAGCTTTGGTAGTGGTT GCTGCGGCTGCTGGAGCCATTGTGGTACTTTTTATGAAGAAGCATAATGGTTCTGGCTCA GATGCTGCTTCTGGTGCTTCTGAAAAGAAATATGGAGATGCTTTGAAAATTGCAATGCAG TTCTTTGATGTCCAAAAATCTGGGAAATTGGTAAATAATAAGATATCATGGAGAGGCGAT TCAGCCGTCAAAGATGGAAGTCAAGAAAAGTTAGACCTCAGTCAAGGAATGTATGATGCT GGCGACCACATGAAATTTAATTTCCCAATGGCTTACACTGCCACTGTGTTGTCATGGGCC ATCCTTGAGTATGGTAATCAGATGAAGGGTGTGGGCCAGTTGGAACCTGCTGAAGACTCA CTCAAATGGATTACGGACTATCTTATCAATTGTCATCCAAAAGATGATGTTCTTTATATT CAGGTGGGTGATGCTGATGCTGACCATAAATGTTGGGACAGACCCGAGGACATGACTGAG GCAAGGCCTCTAATTCAGATAAATGCTTCTACCCCTGGAACAGAAGTTGCAGCTGAAACT GCTGCAGCTATGGCAGCAGCATCCCTGGTCTTCAAGTCGAAGAACTCAGCATACTCAAGT AACCTGCTTAAGCATGCTAAACAGTTGTTCACTTTTGCTGACAAACATAGAGGTACCTAC AGCGAAAATATTCCTGAAGTCGCAACATATTACAATTCAACTGGATATGGAGATGAGCTC TTGTGGGCAGCAAGTTGGCTATATCATGCAACTGGGGATCAAATATATTTTGATTACGCG ACTGGGAAAAATGCAGATTCTTTTGGTAATTTTGGAAATCCAACTTGGTTTAGCTGGGAT AACAAACTAGCTGGTACTCAGGTTCTTTTGTCCCGGGTCAGCTTCTTTAATTCGAAAGTC TCAAACTCAGACACACTTCAACAGTACAAAAAAACTGCAGAAGCTGTAATGTGTGGTCTC TTACCAAAATCTCCAACAGCTACATCCAGCAGAACTGATAGTGGTTTGATATGGATAACT GAATGGAACGCGTTGCAGCATCCTGTAGCCTCTGCCTTCTTAGCTGTGCTGTACAGTGAT TATATGCTCACTTCCAAGACTGATAAAATGACTTGTGATGGTAATGAGTATACACCATCT GATCTCAGAAAGTTCGCCATGTCCCAGGCCAATTATGTATTGGGTGACAATCCAGCAAAG ATGAGTTATCTCGTAGGCTATGGGGACAAATATCCGCAGTATGTTCACCACAGAGGGGCT TCCATTCCTACAGACGCCAATACTAATTGCAAAGAAGGTTGGAAGTATCTAGACTCAACT GAACCAAATCCTAACGTTGCAACTGGGGCTCTCGTTGGTGGTCCATTTCTTAATGAGACA TATATCGATTCAAGGAACAACTCGGTTCAAGGAGAGCCAACCACATACAATAGTGCTGTG GTTGTTGCCCTTCTTTCTGGTTTGGTTTCCACTTCCTCAGTGGTTCAATCTTTCACCTGA GCTGGATACCATCTCACGTCGTACGTCTCTTATCATACGTAGATGCATACATATTTTTTT TATTTCTTGTAGCTCCTTGAACCCATAAAGGTTGCTTTATATATATATGTGTGTATGTTA GTGTGTATCACATCAACTGTTCTTGTGTACTTATATCAAATATATGTGCCGAACAGGGAT AAGAGTTTTTGTAGTATTACTTTGCTCAAAATCGTTATGCAAATTATCTCATAAAAAAAA AGAGAGTTTGAGTCAGCAAATAATCTTTGAAATTGAAGAAGCAGAAGAGGCAAAGAGGGG AATGTTGATGTGAGAAGAAAATGCTATTATTG