Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc04g081280.3.1
CDS Infomation	5'-3' exoribonuclease 3 (AHRD V3.3 *** AT1G75660.1)
Sequence	ATGGGAGTTCCGGCATTTTACCGATGGTTAGCTGAGAAGTATCCGATGGTTGTGGTGGAT GTGGTAGAAGAAGAGGCCGTTGTTATCGAAGATGTAAGAATTCCGGTGGATACAAGCAAA CCTAATCCCAACAACATCGAGTATGATAATTTGTATCTGGATATGAATGGTATCATTCAT CCATGTTTTCATCCCGAAGATAGACCCTCTCCTACAACATTTGAGGAGGTCTTTGAGTGC ATGTTTGATTACATAGACAGGCTTTTCTCTATGGTGCGTCCTCGAAAGCTGCTATATATG GCTATTGATGGTGTTGCACCAAGGGCAAAAATGAATCAGCAGAGATCTAGACGTTTTAGA TCAGCAAAAGATGCTGCAGATGCGGCAGCTGAGGAGGAAAAGCTGCGGGAGGAATTCGAG AGAGAGGGTAGGAAGCTCCCCCCAAAGCAAGAGTCACAAGTTTTTGATTCAAATATCATC ACTCCCGGAACTCAGTTCATGGCCACATTGTCAATTGCTCTTCAGTACTATGTTCATCTT AGACTGAACCATGATTCGGGATGGAAAAATGTCAAGGTTATACTTTCTGATGCAAATGTT CCTGGTGAAGGGGAGCATAAAATTATGTCCTATCTTCGACTCCAAAGAAATCTTCCTGGT TATGACCCAAATACATGCCATTGTCTCTACGGTTTGGATGCAGATCTAATCATGTTGGCT TTGGCTACTCACGAAGTTCACTTCTCCATACTCAGAGAGGTTGTATTTACGCCAGGTCAG CAGGATAAGTGTTTCCTTTGTGGTCAAATGGGTCACCTAGCTGCAGATTGTGAAGGAAAG GCGAAACGGAAAGCAGGAGAATTCGATGAGAAAGGCAATGCTGAGGTTGTGGCAAAAAAA CCTTTCCAGTTCCTCCACATATGGACTTTGCGGGAGTATTTAGAATTTGATATGAGAATC CCAAATCCTCCTTTTGAGATTGATTTCGAGCGGATCATCGACGACTTCATATTTATTTGT TTCTTTGTTGGAAATGATTTTCTCCCACACATGCCTACTCTTGAGATCCGCGAGGGAGCA ATAAACTTGTTACTGGCTGTCTATAAGAAGGAGTTTAGATCAATGGAAGGTTATTTAACT GATGGTAGCCAGCCAAATCTTAGCAGAGTAGAACATTTCATTCAGGCCGTGGGATCATAT GAAGATAAGATATTTCAGAAAAGAGCGCGGTTACATCAGAGACAATCTGAGAGAATTAAG CGTGAAAAGGCCCAGTTAAAAAGAGGAGATGATTCTGCTCCTCGAGCCGAACCTGAATCT TTGGTTCCAGTTGCTCGGTTCAGTGGTTCTCGGCTTGCTTCAGGTCCTTCTCCTTCTCCC TATCAACAAGGGGCAACTGCAAGACGTCCTCAACAAGGAGGAACTGTAAGACGTCCCCAA CTTCAGCAAGGCACATCAAGTCTTTCCGTCCTCGACTTTCCGAATGAATACTATGAGCCT GTTGATGATACAAGATCTATTTTTCGCACCAAAAAAGCTGCACGTTTGAGTTCTGATGCC ACGATAGGAGCTGCAATTGTTGAAGCTGAGGATAGCCTCGAAACTGAAGTGTTAGAAAAC AAAGAAGAACTGAAAACAAAGCTAAACAAGTTGATCCGTGAGAAGAATGATGTTTTTAAT TCAGAGAATCCCGAGGAAGACAAGATCAAACTGGGAGTGCCAGGATGGAAAGAAAGGTAT TATGAGGAAAAATTTTCTGCAAAGACACCTGAGGAGATGGAAGAAGTACGAAAGGACATT GTCTTGAAATACACAGAAGGGTTGTGCTGGGTTATGCACTATTATTACGAAGGTGTTTGT TCCTGGCAGTGGTTTTATCCTTATCATTATGCTCCTTTTGCTTCTGACCTCAAGGGTCTT GGGGAGTTGAATATTACCTTTGAACTAGGTTCTCCATTCAAACCATTCAATCAGCTGTTG GGAGTTTTTCCTGCTGCCAGTTCACATGCTCTTCCTGAACAGTATAGGCAATTGATGACA GACCCAAACTCTCCAATTAGCGACTTCTATCCTTCTGATTTTGAGGTGGACATGAATGGG AAGCGCTTTTCATGGCAGGGCATTGCCAAACTACCTTTCATTGATGAAGCCCGGCTCCTT GCAGAGGTTGCAAAAGTTGAACATACCCTGACGGAGGAAGAAGCACGAAGAAATTGTGTG ATGAATGATATGCTTTTTGTGTCATTATCTCACCCTTTGTCTCCATACATTTTTTCTCTT GATGATCGCTGTAAGCAGCTTACAGACGACGAACGCGTTGAAGTGAAGGAGCGCTTGGAC CCAAAAGCGAGTGGTGGCATGAATGGCTACATATCCCTTTGCATGGGAGATCCTTGTCCT CCAATTTTTAGAGCTCCTATGGATGGGTTGGAAGATATTATGGACAATCAAGTCATATGT GCAATATACAAACTCCCTGATGCCCATAAGCACATCACACGGCCACCTAAAGGGGTTATT TTTCCAAAGAAGATGGTGACATTCAGTGATATAAAACCTGATCCAGTGTTGTGGCATGAG GATTCTGGGAGGAAACCTTGGGAAAATGGAAGGAACCACCACCCTGGCGGAAACTCTGGT CGTCACCTTGGAGAGGCAGCACACAGGCTGGTTTCTAATAGTTTGCAGATTAGGAGTGGC CGTGGGGATAATTTACATGCTCAACCAGGACCATATCCTTCTGGTCCTTTTCCTTCCTCT CAAGGATACAATGGTCAGGGACATGTTCGCCCTAATTTTGATTATTCTGCTCGAGATGAG ACAGCTGCTGCGCCTTATCAGTATGATCAGAGTTACCACCCTGCTTATATCCCAGCTGCA GTTGATCCATATAGTAGGGCTCCTCCTCTGTATGAGATGGGTGGCCAACCTGCCCCTCCT AGCAGGGATTATCACAGACATGGACATCAAGCCGCTGTGACGCAGCAAAATGTCGGATAT AGTTATTCTTCTCATACCAATCGTCAGCAGCATGTTAGCCAATCACCAGTACCACCGATT GATCATTTTCACCAGCAGAGTAGATACAGTAGTTACCCCAATTATCATGAACCTTATGAG CCAGGAAGCTATCACCCACCTTATGAGCCAGTAAGCTATCACCCACCTTATGAGCCAGGA CCCTATAACCCACAGGATGGTGTATGGGCTCCGCAAGTAAACCAAAATGCTGGTCGGGGT TATGGCAACCCACGTCCCTCCAGCAATCACTTCTCGGCTTTAGGAAGAAGAAACGATAGA GGGCCACCATCTTCAGGCTATCGCCGTTAG

Peptide Sequence

PEP ID	Solyc04g081280.3.1
PEP Infomation	5'-3' exoribonuclease 3 (AHRD V3.3 *** AT1G75660.1)
Sequence	MGVPAFYRWLAEKYPMVVVDVVEEEAVVIEDVRIPVDTSKPNPNNIEYDNLYLDMNGIIH PCFHPEDRPSPTTFEEVFECMFDYIDRLFSMVRPRKLLYMAIDGVAPRAKMNQQRSRRFR SAKDAADAAAEEEKLREEFEREGRKLPPKQESQVFDSNIITPGTQFMATLSIALQYYVHL RLNHDSGWKNVKVILSDANVPGEGEHKIMSYLRLQRNLPGYDPNTCHCLYGLDADLIMLA LATHEVHFSILREVVFTPGQQDKCFLCGQMGHLAADCEGKAKRKAGEFDEKGNAEVVAKK PFQFLHIWTLREYLEFDMRIPNPPFEIDFERIIDDFIFICFFVGNDFLPHMPTLEIREGA INLLLAVYKKEFRSMEGYLTDGSQPNLSRVEHFIQAVGSYEDKIFQKRARLHQRQSERIK REKAQLKRGDDSAPRAEPESLVPVARFSGSRLASGPSPSPYQQGATARRPQQGGTVRRPQ LQQGTSSLSVLDFPNEYYEPVDDTRSIFRTKKAARLSSDATIGAAIVEAEDSLETEVLEN KEELKTKLNKLIREKNDVFNSENPEEDKIKLGVPGWKERYYEEKFSAKTPEEMEEVRKDI VLKYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKGLGELNITFELGSPFKPFNQLL GVFPAASSHALPEQYRQLMTDPNSPISDFYPSDFEVDMNGKRFSWQGIAKLPFIDEARLL AEVAKVEHTLTEEEARRNCVMNDMLFVSLSHPLSPYIFSLDDRCKQLTDDERVEVKERLD PKASGGMNGYISLCMGDPCPPIFRAPMDGLEDIMDNQVICAIYKLPDAHKHITRPPKGVI FPKKMVTFSDIKPDPVLWHEDSGRKPWENGRNHHPGGNSGRHLGEAAHRLVSNSLQIRSG RGDNLHAQPGPYPSGPFPSSQGYNGQGHVRPNFDYSARDETAAAPYQYDQSYHPAYIPAA VDPYSRAPPLYEMGGQPAPPSRDYHRHGHQAAVTQQNVGYSYSSHTNRQQHVSQSPVPPI DHFHQQSRYSSYPNYHEPYEPGSYHPPYEPVSYHPPYEPGPYNPQDGVWAPQVNQNAGRG YGNPRPSSNHFSALGRRNDRGPPSSGYRR*

Transcript Sequence

Transcript ID	Solyc04g081280.3.1
Transcript Infomation	5'-3' exoribonuclease 3 (AHRD V3.3 *** AT1G75660.1)
Sequence	TCATCTAACTAAGGGTATTATTGTCCTAAATTTTTTGTGCCCTACAAGATCTCTCTTGAA TCGGAGCCCCGTCATCCTTGTTCAAACAGGGTAAATACATCTCTCCTAGGGTTAGGGTTT AGTTTCAGTTTCTAAATTACTTCTCTTTTTCTTCAATTCTCAAATTTTCAGTTCCATTGA ATTGAAGGCTTGAGAAAAGTGGAATTGAAGGGGATTTGGGAATCCCGTAACAATGGGAGT TCCGGCATTTTACCGATGGTTAGCTGAGAAGTATCCGATGGTTGTGGTGGATGTGGTAGA AGAAGAGGCCGTTGTTATCGAAGATGTAAGAATTCCGGTGGATACAAGCAAACCTAATCC CAACAACATCGAGTATGATAATTTGTATCTGGATATGAATGGTATCATTCATCCATGTTT TCATCCCGAAGATAGACCCTCTCCTACAACATTTGAGGAGGTCTTTGAGTGCATGTTTGA TTACATAGACAGGCTTTTCTCTATGGTGCGTCCTCGAAAGCTGCTATATATGGCTATTGA TGGTGTTGCACCAAGGGCAAAAATGAATCAGCAGAGATCTAGACGTTTTAGATCAGCAAA AGATGCTGCAGATGCGGCAGCTGAGGAGGAAAAGCTGCGGGAGGAATTCGAGAGAGAGGG TAGGAAGCTCCCCCCAAAGCAAGAGTCACAAGTTTTTGATTCAAATATCATCACTCCCGG AACTCAGTTCATGGCCACATTGTCAATTGCTCTTCAGTACTATGTTCATCTTAGACTGAA CCATGATTCGGGATGGAAAAATGTCAAGGTTATACTTTCTGATGCAAATGTTCCTGGTGA AGGGGAGCATAAAATTATGTCCTATCTTCGACTCCAAAGAAATCTTCCTGGTTATGACCC AAATACATGCCATTGTCTCTACGGTTTGGATGCAGATCTAATCATGTTGGCTTTGGCTAC TCACGAAGTTCACTTCTCCATACTCAGAGAGGTTGTATTTACGCCAGGTCAGCAGGATAA GTGTTTCCTTTGTGGTCAAATGGGTCACCTAGCTGCAGATTGTGAAGGAAAGGCGAAACG GAAAGCAGGAGAATTCGATGAGAAAGGCAATGCTGAGGTTGTGGCAAAAAAACCTTTCCA GTTCCTCCACATATGGACTTTGCGGGAGTATTTAGAATTTGATATGAGAATCCCAAATCC TCCTTTTGAGATTGATTTCGAGCGGATCATCGACGACTTCATATTTATTTGTTTCTTTGT TGGAAATGATTTTCTCCCACACATGCCTACTCTTGAGATCCGCGAGGGAGCAATAAACTT GTTACTGGCTGTCTATAAGAAGGAGTTTAGATCAATGGAAGGTTATTTAACTGATGGTAG CCAGCCAAATCTTAGCAGAGTAGAACATTTCATTCAGGCCGTGGGATCATATGAAGATAA GATATTTCAGAAAAGAGCGCGGTTACATCAGAGACAATCTGAGAGAATTAAGCGTGAAAA GGCCCAGTTAAAAAGAGGAGATGATTCTGCTCCTCGAGCCGAACCTGAATCTTTGGTTCC AGTTGCTCGGTTCAGTGGTTCTCGGCTTGCTTCAGGTCCTTCTCCTTCTCCCTATCAACA AGGGGCAACTGCAAGACGTCCTCAACAAGGAGGAACTGTAAGACGTCCCCAACTTCAGCA AGGCACATCAAGTCTTTCCGTCCTCGACTTTCCGAATGAATACTATGAGCCTGTTGATGA TACAAGATCTATTTTTCGCACCAAAAAAGCTGCACGTTTGAGTTCTGATGCCACGATAGG AGCTGCAATTGTTGAAGCTGAGGATAGCCTCGAAACTGAAGTGTTAGAAAACAAAGAAGA ACTGAAAACAAAGCTAAACAAGTTGATCCGTGAGAAGAATGATGTTTTTAATTCAGAGAA TCCCGAGGAAGACAAGATCAAACTGGGAGTGCCAGGATGGAAAGAAAGGTATTATGAGGA AAAATTTTCTGCAAAGACACCTGAGGAGATGGAAGAAGTACGAAAGGACATTGTCTTGAA ATACACAGAAGGGTTGTGCTGGGTTATGCACTATTATTACGAAGGTGTTTGTTCCTGGCA GTGGTTTTATCCTTATCATTATGCTCCTTTTGCTTCTGACCTCAAGGGTCTTGGGGAGTT GAATATTACCTTTGAACTAGGTTCTCCATTCAAACCATTCAATCAGCTGTTGGGAGTTTT TCCTGCTGCCAGTTCACATGCTCTTCCTGAACAGTATAGGCAATTGATGACAGACCCAAA CTCTCCAATTAGCGACTTCTATCCTTCTGATTTTGAGGTGGACATGAATGGGAAGCGCTT TTCATGGCAGGGCATTGCCAAACTACCTTTCATTGATGAAGCCCGGCTCCTTGCAGAGGT TGCAAAAGTTGAACATACCCTGACGGAGGAAGAAGCACGAAGAAATTGTGTGATGAATGA TATGCTTTTTGTGTCATTATCTCACCCTTTGTCTCCATACATTTTTTCTCTTGATGATCG CTGTAAGCAGCTTACAGACGACGAACGCGTTGAAGTGAAGGAGCGCTTGGACCCAAAAGC GAGTGGTGGCATGAATGGCTACATATCCCTTTGCATGGGAGATCCTTGTCCTCCAATTTT TAGAGCTCCTATGGATGGGTTGGAAGATATTATGGACAATCAAGTCATATGTGCAATATA CAAACTCCCTGATGCCCATAAGCACATCACACGGCCACCTAAAGGGGTTATTTTTCCAAA GAAGATGGTGACATTCAGTGATATAAAACCTGATCCAGTGTTGTGGCATGAGGATTCTGG GAGGAAACCTTGGGAAAATGGAAGGAACCACCACCCTGGCGGAAACTCTGGTCGTCACCT TGGAGAGGCAGCACACAGGCTGGTTTCTAATAGTTTGCAGATTAGGAGTGGCCGTGGGGA TAATTTACATGCTCAACCAGGACCATATCCTTCTGGTCCTTTTCCTTCCTCTCAAGGATA CAATGGTCAGGGACATGTTCGCCCTAATTTTGATTATTCTGCTCGAGATGAGACAGCTGC TGCGCCTTATCAGTATGATCAGAGTTACCACCCTGCTTATATCCCAGCTGCAGTTGATCC ATATAGTAGGGCTCCTCCTCTGTATGAGATGGGTGGCCAACCTGCCCCTCCTAGCAGGGA TTATCACAGACATGGACATCAAGCCGCTGTGACGCAGCAAAATGTCGGATATAGTTATTC TTCTCATACCAATCGTCAGCAGCATGTTAGCCAATCACCAGTACCACCGATTGATCATTT TCACCAGCAGAGTAGATACAGTAGTTACCCCAATTATCATGAACCTTATGAGCCAGGAAG CTATCACCCACCTTATGAGCCAGTAAGCTATCACCCACCTTATGAGCCAGGACCCTATAA CCCACAGGATGGTGTATGGGCTCCGCAAGTAAACCAAAATGCTGGTCGGGGTTATGGCAA CCCACGTCCCTCCAGCAATCACTTCTCGGCTTTAGGAAGAAGAAACGATAGAGGGCCACC ATCTTCAGGCTATCGCCGTTAGAGGTATCATCATTTTTGCAAGTGATGGAGTGTTGTTTC TGACTTAATACAGAAAAAAGAATAGAAGAGCTGGTAGAGTACAAACAGATATTGCTGGCT GATATGTAAGTTCAGGCGACTTTACAGTAATGTTGTACAATGTAGGTATCTTGCATAGCG TTTTACCCGCATTCTTTCTCTTCCTTTCGCTGTTATGATATAGTTGAGCTTCTTTTAGTT GATTGAAAAATGTTGGATGAATAAGATTATGCATTTTTCTCATAAGCTATGAGCTTTGTT TGTAACATCTTTTTTGCTTATTGAGAAAAACTTTTAGCGCATGATTTCTCTTCTGTGCAT TTTATTCATGGCGTGCCTATTTGGTTGTTGGTAGATTTTAATGATGTATATTTTTAGAAT TGCGGTAAGAATTAACTTAATTATAAGTATTCACAATGTCCCACTACAATTTGAAATTCC ATCCTCCTCGTTTAGACGAAGATAGTGGAGAGACAAGATGCGGGAAGTGAGACAGAGGAG CACAAATGCTTTGGTGTGTAGGTGATAGATTTGAGGAGAAAGGTGATTAGGTACGACACA TTTGTAACTCATCGAACATATGACCCATGATAGATACCTTGATGTGATCCAATTGCTATT ATGCTTCTATTCAAGTGAAGTCTTCCCTATCTTATGGGCCATTAGATAAGATATAAGGTC CTAAATATGATATTAGTTTATTTGTGCCCCAAACCGCATGAGTCTAGATTAGTCGGGTCA ATATGGTTCGATGGAAAAAACATGAAGAGGTCTACGATGTCTGGATTCAATCCAACTTGT ATCGGTTATGATACAAATTGTAACTCTTGGAAGCAAAAGAACCACTTTGATCTAATTTTA CTCGTATATTAATTTGAATGCATGCATGATCTTATTTTTACTTTAGAGAGGTAGGAAAGT TGTTTTTGATCGATTATTCCCTCGAGATAACATCCAAACATTGTTATCTCTCGATGGAAA AGACTTTCATTGATAAACATTTCTAGCTAGGCATGTACAACCTTATCCCATTACTATTTA TCTTTAAGGAAGCAAAGTTTGAAGAGAAGGCAACCAAGGATGAGCCATGTGAAGAGGTTT CATTAAATAATTGAAGTACAGTCGAAGGATATCGAAAGAATGTACCACTTCCTATTTTCA ATTTGAGTGTGTTTTATAATATA