Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g081230.3.1
CDS Infomation

TLD-domain containing nucleolar protein (AHRD V3.3 *** AT5G39590.1)
Sequence

ATGGGTCAATCTTCATCGGCCGAGCAAGTGTCGCCGGAGCAACGGGAAGCAGAATCTGTA
GCTGCTTCAACTGGAGCTCTTCCTAATCTTAAGAAAGCTTTCTCTGTTCTTTCTGATCCT
CAAACTCACTCCATCTCCATTCATTCCCTTCAAAAATGTTTTGGGTTCTCTATTGATGGA
TCAACAAACGAAGAGTCTGTAGTGCCAAAGGAATTTCCAGTTTTGATGAGTAATTTGAGT
TCTTCAATAGTTGACTTGTTTTTCTTGTCTGAAAAGGGAGGTATCAGCTGGGTTGAGTTT
CTAAAGGGCCATATAAAGTGTTCTGGAAGGACAGTTAGTTCAGCTTCACTTAATAGTTTG
TTGAGGTTATTTGGGATGGTATCTGTTAAGGCAGGTCTTCCAGAAAAACTACAGATCGTT
TCCGATGAGGATGATTGTAAAATCAGCGGATTTTTATTGCCAGTTGATGTTCAGATGCTT
CTTTCTATGTGTTGGATTATGTGGTGGGACTCGAACAAGTTGAAGGCTTCATCTACTTTA
GGTGATTCTGGTCTTCCTGATGTTACACATTTGGTTTTGTCAGCTATAAACTCTTGTGCC
GAAGCAGATAAAAAAATGGATTTATGGGATAACAGCATTTTAGATATGGATATACAACTT
CCTGTTGCAAAAATTATAATGTGGGCTTTGAAGACAGTGCCAAGCCTCTCCGATTGCTTT
GGAAAATTTGTCCACGCTAGACTGTTTTACGTAGCCGCTCACGAGGAAAAACTTGACCAA
GCGGACCTTTTCTCACATGATATTTCTGCAAAGGAAAGGAGCGTTGGCCATCTCCTTAAT
TCTGGAAGGGCTTGGGCTATCTCACTTACATTGAGGGGCAATTTAAGTGAAGAAATTTCA
AAAGTATGCTTTCCAAGTGCTGCAGAGGAAGTAGATGATTACCTACTTTATCGGTCTTCC
CTTCATGGAAAAGGTCTGAACAGATTCTGGTCAAATATTGAAGGATATAATGCTCCATTG
CTAATTCTTATCTCTGCTCATGAGGCCAATAATGACGCAAGGAGATGGACTATTGGTTCT
CTCATTCATCAGGGTTTAGAAAATCATGACACTTTCTATGGGACTTCTGGTAGTTTATAC
TCCATCAGTCCAGTTTTTCATGTATTCACACCTTCAGGAAAGGAGAAAAACTTTGTTTAC
AGCCATTTGCATGGAACCGTTAAATATGAAGCTCATCCAAAGCCTGTCGGACTTGCTTTT
GGAGGATCCTCTGGCAATGAAAGAATATTTGTAGATGAAGATTTTGCTAAAGTTATAGTT
CGTCATCATGCTTGTGACAAAACTTACCATCATGGTCCTCTTTACCCTGACCAGGGGTTC
TTACCGGTTGAAGCTCTGATTATGGACGTGGAGGTATTGGGATTGGGAGGAAAAAGGGCT
AGAGATATTCAGTCATCGTACAAAAAGAGGGAAGAACTCTTTACTGAGCAAAGACGAAAG
GTTGACTTGAAAACATTTGGAAATTGGGAAGATTCCCCCGAGAAAATGATGATGGATATG
GTTTCTGACCCTAACAGAGTTCGTAGAGAAGATCGATGA

Peptide Sequence

PEP ID

Solyc04g081230.3.1
PEP Infomation

TLD-domain containing nucleolar protein (AHRD V3.3 *** AT5G39590.1)
Sequence

MGQSSSAEQVSPEQREAESVAASTGALPNLKKAFSVLSDPQTHSISIHSLQKCFGFSIDG
STNEESVVPKEFPVLMSNLSSSIVDLFFLSEKGGISWVEFLKGHIKCSGRTVSSASLNSL
LRLFGMVSVKAGLPEKLQIVSDEDDCKISGFLLPVDVQMLLSMCWIMWWDSNKLKASSTL
GDSGLPDVTHLVLSAINSCAEADKKMDLWDNSILDMDIQLPVAKIIMWALKTVPSLSDCF
GKFVHARLFYVAAHEEKLDQADLFSHDISAKERSVGHLLNSGRAWAISLTLRGNLSEEIS
KVCFPSAAEEVDDYLLYRSSLHGKGLNRFWSNIEGYNAPLLILISAHEANNDARRWTIGS
LIHQGLENHDTFYGTSGSLYSISPVFHVFTPSGKEKNFVYSHLHGTVKYEAHPKPVGLAF
GGSSGNERIFVDEDFAKVIVRHHACDKTYHHGPLYPDQGFLPVEALIMDVEVLGLGGKRA
RDIQSSYKKREELFTEQRRKVDLKTFGNWEDSPEKMMMDMVSDPNRVRREDR*

Transcript Sequence

Transcript ID

Solyc04g081230.3.1
Transcript Infomation

TLD-domain containing nucleolar protein (AHRD V3.3 *** AT5G39590.1)
Sequence

ATGGGTCAATCTTCATCGGCCGAGCAAGTGTCGCCGGAGCAACGGGAAGCAGAATCTGTA
GCTGCTTCAACTGGAGCTCTTCCTAATCTTAAGAAAGCTTTCTCTGTTCTTTCTGATCCT
CAAACTCACTCCATCTCCATTCATTCCCTTCAAAAATGTTTTGGGTTCTCTATTGATGGA
TCAACAAACGAAGAGTCTGTAGTGCCAAAGGAATTTCCAGTTTTGATGAGTAATTTGAGT
TCTTCAATAGTTGACTTGTTTTTCTTGTCTGAAAAGGGAGGTATCAGCTGGGTTGAGTTT
CTAAAGGGCCATATAAAGTGTTCTGGAAGGACAGTTAGTTCAGCTTCACTTAATAGTTTG
TTGAGGTTATTTGGGATGGTATCTGTTAAGGCAGGTCTTCCAGAAAAACTACAGATCGTT
TCCGATGAGGATGATTGTAAAATCAGCGGATTTTTATTGCCAGTTGATGTTCAGATGCTT
CTTTCTATGTGTTGGATTATGTGGTGGGACTCGAACAAGTTGAAGGCTTCATCTACTTTA
GGTGATTCTGGTCTTCCTGATGTTACACATTTGGTTTTGTCAGCTATAAACTCTTGTGCC
GAAGCAGATAAAAAAATGGATTTATGGGATAACAGCATTTTAGATATGGATATACAACTT
CCTGTTGCAAAAATTATAATGTGGGCTTTGAAGACAGTGCCAAGCCTCTCCGATTGCTTT
GGAAAATTTGTCCACGCTAGACTGTTTTACGTAGCCGCTCACGAGGAAAAACTTGACCAA
GCGGACCTTTTCTCACATGATATTTCTGCAAAGGAAAGGAGCGTTGGCCATCTCCTTAAT
TCTGGAAGGGCTTGGGCTATCTCACTTACATTGAGGGGCAATTTAAGTGAAGAAATTTCA
AAAGTATGCTTTCCAAGTGCTGCAGAGGAAGTAGATGATTACCTACTTTATCGGTCTTCC
CTTCATGGAAAAGGTCTGAACAGATTCTGGTCAAATATTGAAGGATATAATGCTCCATTG
CTAATTCTTATCTCTGCTCATGAGGCCAATAATGACGCAAGGAGATGGACTATTGGTTCT
CTCATTCATCAGGGTTTAGAAAATCATGACACTTTCTATGGGACTTCTGGTAGTTTATAC
TCCATCAGTCCAGTTTTTCATGTATTCACACCTTCAGGAAAGGAGAAAAACTTTGTTTAC
AGCCATTTGCATGGAACCGTTAAATATGAAGCTCATCCAAAGCCTGTCGGACTTGCTTTT
GGAGGATCCTCTGGCAATGAAAGAATATTTGTAGATGAAGATTTTGCTAAAGTTATAGTT
CGTCATCATGCTTGTGACAAAACTTACCATCATGGTCCTCTTTACCCTGACCAGGGGTTC
TTACCGGTTGAAGCTCTGATTATGGACGTGGAGGTATTGGGATTGGGAGGAAAAAGGGCT
AGAGATATTCAGTCATCGTACAAAAAGAGGGAAGAACTCTTTACTGAGCAAAGACGAAAG
GTTGACTTGAAAACATTTGGAAATTGGGAAGATTCCCCCGAGAAAATGATGATGGATATG
GTTTCTGACCCTAACAGAGTTCGTAGAGAAGATCGATGAGTTGATTCTTCCCTAGAAGAG
ATTTCACACGATCCAGGACTTCTATCTTAATGTATATATAAGGAGATGTTGGAGTTTTAT
GTGCTACTACACTTTGAATAAGATTTGTATGTTTGGCTATATAAGTCTGTATTTCACCCA
CTCTCTGTTATCTGTTGTGTCAAAAGTGAGTTTATATAGTACACAAACATAATGCATATT
ATGTATAAGATGTATACTAGATTTGAGATGCTCTGGTTGGTCAAATATTATCCATCATCT
ATGATTTTTATACAATCCTCACTCAATTAA