Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g081070.3.1
CDS Infomation

Hop-interacting protein THI044 (AHRD V3.3 *** G8Z271_SOLLC)
Sequence

ATGGAGGCATTAACACACCTAAGCTTTGGCATTTGTACTGCACGCCTTTCACCACCATAT
CAACTAGCCGGCGGCGTCGGTAAGAAGCCGCCGAGACTCAATGCTGTTACCGGAGGAGCT
AGTAGTGTTACCGGTGGAACAAGTAGTGTACCGACGAACTTCTCCGCCAGTAAATGGGCG
GATCGTCTTCTCGCCGATTTCCAATTCCTTCCTTCCACCACCACCACCTCCGACTCATCG
GATTTCCAGAATTCAACTTCTACAACCTCTGTTACGACTATTCCTCCTCCCGTTGCTCCT
TCAGACCGCCACATTTCAATGCCTATAGACTTTTATAGAGTGCTTGGTGCTGAAGCTCAC
TTCCTCGGTGATGGTATCAGGAGATGCTACGATGCTAGAATTACTAAGCCGCCGCAGTAC
GGGTACAGTCAAGAGGCATTGATTGGCCGACGACAGATTCTTCAAGCTGCTTGTGAAACC
CTTGCTGACTCTACCTCTCGTAGAGAATACAATCAAGGCCTCGCTCAGCATGAGTTCGAT
ACTATTCTAACTCCGGTCCCCTGGGATAAAGTTCCGGGAGCATTGTGTGTTTTGCAAGAA
GCTGGTGAGACTGGAGTAGTTCTTCAGATTGGGGAAAGCTTGCTGAAAGAGCGGTTGCCA
AAGTCATTCAAGCAAGATGTGGTCTTAGCTATGGCACTCGCATATGTTGACCATTCGCGA
GATGCGATGGCACTTTCGCCTCCTGATTTTGTTCAAGGTTGTGAACTGCTTGAAAGAGCA
CTTAAGCTGTTGCAGGAAGAAGGTGCAAGTAATCTTGCCCTTGATCTGCAATCCCAGATA
GATGAGACATTAGAAGAGATAAATCCACGCTACGTACTTGAACTTCTAGCTTTTCCTCTT
GGTGATGAATACCGAATGAAAAGAGTAGAGGCTCTTCAAGGTGTGCGCAACATTTTGTGG
GCTGTTGGAGGAGGAGGAGCAGCTGCAATTTCAGGGGGGTTCACACGAGAAGATTTCATG
AATGAGGCCTTCCTACGGATGACAGCTGCTGAGCAGGTGGACCTCTTCGTCGCAACGCCA
AGTAACATTCCTGCAGAAAGCTTTGAAGTTTACGGGGTGGCGCTTGCACTTGTTGCTCAA
GCTTTTGTGGGAAAAAAACCTCATCTCATTCAAGATGCTGATAACCTTTTTCAGCAGCTT
CAGCAGACCAAAGTTACAGCTTACGGCAGTTCTGTGTCTGTATACACTGTTAGAGAAAAC
CGTGAAATAGACTTCGCTTTGGAGAGGGGCCTTTGTTCACTGCTTGTTGGAGAAGTCGAT
GGATGTCGCTCTTGGTTGGGCCTAGACAGTGAGGACTCCCCTTATAGAGATCCATCTATA
GTGACTTTTGTTGCAGAACACTCAAAGGACGACAACGAAAATGATCTGCTCCCTGGACTA
TGTAAGCTTTTGGAGACCTGGTTGATGGAAGTGGTCTTTCCCAGATTTAGAGAGACAGAA
GATGTCACTTTTAAGCTTGGTGACTATTATGATGACCCTACTGTTTTAAGATATTTGGAA
AGGCTGGAAGGTGGTGGTGCTTCACCTTTAGCTGCTGCTGCAGCTATTGCAAGGATTGGA
GCTGAAGCTACAGCTGTGCTTGATAGTGTTAAGGCTAGTGCAATTCAGGCACTGCAGAAA
GTTTTTCCTGCTGGGGACGGGGAAGGCAGTGTAAGACGATATGGTGACAATGAGATGAAC
GAATTTGATATTGCTAAGCCATTTGAGGATCTTGAAGAACTCCGTGATCAAAATAACTTT
ATTACGACTGTTGGGGATCCTGAGAGAAAGAGTTCTAACTATCAAGAGCAAGATGTGATA
ACTGACAGAATAAAAGATGCAAGTCTGAAGATTATGTGTGCTGGAGTAGCGGTTGGTTTC
TTTACTTTGGTTGGATTGAAGCTTTCTTCCTTTAGACATGGGTCTTCAGTTCAACATTGT
GCTAGTGCTACTGGTTCAGCCATTGCCTCGGATGTCATCAATGTGGATACCTCTGCCTCA
CCAGTTGAAAATCCTCTTGAGGTTCCTAGAATGGATGCAAGACTTGCAGAAAGTATAGTT
CGGAAGTGGCAGAATATCAAATCCCAGTCTCTTGGAACCGATCACTGTCTCAACAGATTG
TCAGAGGTTTTGGATGGTCAGATGCTGAAGATTTGGACAGACCGTGCAAGAGAAATTGCG
CAGCATGGTTGGTTTTGGGAGTACAAGCTTTTAAACCTTGCCATTGACAGTGTAACTGTC
TCAGCTGATGGCCGACGTGCTACTGTGGAAGCTACTCTAGAGGAATCAGCAAGTTTAACT
GATGTAGCCCATCCAGAGCACAATGACTCATACAGTACTACCTATACAACTAGGTACGAC
ATGTCCTGGGCAAACTCCGGTTGGAAAATTGTGGAAGGAGCCGTTCTTAAATCGCGATAA

Peptide Sequence

PEP ID

Solyc04g081070.3.1
PEP Infomation

Hop-interacting protein THI044 (AHRD V3.3 *** G8Z271_SOLLC)
Sequence

MEALTHLSFGICTARLSPPYQLAGGVGKKPPRLNAVTGGASSVTGGTSSVPTNFSASKWA
DRLLADFQFLPSTTTTSDSSDFQNSTSTTSVTTIPPPVAPSDRHISMPIDFYRVLGAEAH
FLGDGIRRCYDARITKPPQYGYSQEALIGRRQILQAACETLADSTSRREYNQGLAQHEFD
TILTPVPWDKVPGALCVLQEAGETGVVLQIGESLLKERLPKSFKQDVVLAMALAYVDHSR
DAMALSPPDFVQGCELLERALKLLQEEGASNLALDLQSQIDETLEEINPRYVLELLAFPL
GDEYRMKRVEALQGVRNILWAVGGGGAAAISGGFTREDFMNEAFLRMTAAEQVDLFVATP
SNIPAESFEVYGVALALVAQAFVGKKPHLIQDADNLFQQLQQTKVTAYGSSVSVYTVREN
REIDFALERGLCSLLVGEVDGCRSWLGLDSEDSPYRDPSIVTFVAEHSKDDNENDLLPGL
CKLLETWLMEVVFPRFRETEDVTFKLGDYYDDPTVLRYLERLEGGGASPLAAAAAIARIG
AEATAVLDSVKASAIQALQKVFPAGDGEGSVRRYGDNEMNEFDIAKPFEDLEELRDQNNF
ITTVGDPERKSSNYQEQDVITDRIKDASLKIMCAGVAVGFFTLVGLKLSSFRHGSSVQHC
ASATGSAIASDVINVDTSASPVENPLEVPRMDARLAESIVRKWQNIKSQSLGTDHCLNRL
SEVLDGQMLKIWTDRAREIAQHGWFWEYKLLNLAIDSVTVSADGRRATVEATLEESASLT
DVAHPEHNDSYSTTYTTRYDMSWANSGWKIVEGAVLKSR*

Transcript Sequence

Transcript ID

Solyc04g081070.3.1
Transcript Infomation

Hop-interacting protein THI044 (AHRD V3.3 *** G8Z271_SOLLC)
Sequence

ATGAGTTATGAGCACATTTTGAAGCTTCCTTAACAATGGAGGCATTAACACACCTAAGCT
TTGGCATTTGTACTGCACGCCTTTCACCACCATATCAACTAGCCGGCGGCGTCGGTAAGA
AGCCGCCGAGACTCAATGCTGTTACCGGAGGAGCTAGTAGTGTTACCGGTGGAACAAGTA
GTGTACCGACGAACTTCTCCGCCAGTAAATGGGCGGATCGTCTTCTCGCCGATTTCCAAT
TCCTTCCTTCCACCACCACCACCTCCGACTCATCGGATTTCCAGAATTCAACTTCTACAA
CCTCTGTTACGACTATTCCTCCTCCCGTTGCTCCTTCAGACCGCCACATTTCAATGCCTA
TAGACTTTTATAGAGTGCTTGGTGCTGAAGCTCACTTCCTCGGTGATGGTATCAGGAGAT
GCTACGATGCTAGAATTACTAAGCCGCCGCAGTACGGGTACAGTCAAGAGGCATTGATTG
GCCGACGACAGATTCTTCAAGCTGCTTGTGAAACCCTTGCTGACTCTACCTCTCGTAGAG
AATACAATCAAGGCCTCGCTCAGCATGAGTTCGATACTATTCTAACTCCGGTCCCCTGGG
ATAAAGTTCCGGGAGCATTGTGTGTTTTGCAAGAAGCTGGTGAGACTGGAGTAGTTCTTC
AGATTGGGGAAAGCTTGCTGAAAGAGCGGTTGCCAAAGTCATTCAAGCAAGATGTGGTCT
TAGCTATGGCACTCGCATATGTTGACCATTCGCGAGATGCGATGGCACTTTCGCCTCCTG
ATTTTGTTCAAGGTTGTGAACTGCTTGAAAGAGCACTTAAGCTGTTGCAGGAAGAAGGTG
CAAGTAATCTTGCCCTTGATCTGCAATCCCAGATAGATGAGACATTAGAAGAGATAAATC
CACGCTACGTACTTGAACTTCTAGCTTTTCCTCTTGGTGATGAATACCGAATGAAAAGAG
TAGAGGCTCTTCAAGGTGTGCGCAACATTTTGTGGGCTGTTGGAGGAGGAGGAGCAGCTG
CAATTTCAGGGGGGTTCACACGAGAAGATTTCATGAATGAGGCCTTCCTACGGATGACAG
CTGCTGAGCAGGTGGACCTCTTCGTCGCAACGCCAAGTAACATTCCTGCAGAAAGCTTTG
AAGTTTACGGGGTGGCGCTTGCACTTGTTGCTCAAGCTTTTGTGGGAAAAAAACCTCATC
TCATTCAAGATGCTGATAACCTTTTTCAGCAGCTTCAGCAGACCAAAGTTACAGCTTACG
GCAGTTCTGTGTCTGTATACACTGTTAGAGAAAACCGTGAAATAGACTTCGCTTTGGAGA
GGGGCCTTTGTTCACTGCTTGTTGGAGAAGTCGATGGATGTCGCTCTTGGTTGGGCCTAG
ACAGTGAGGACTCCCCTTATAGAGATCCATCTATAGTGACTTTTGTTGCAGAACACTCAA
AGGACGACAACGAAAATGATCTGCTCCCTGGACTATGTAAGCTTTTGGAGACCTGGTTGA
TGGAAGTGGTCTTTCCCAGATTTAGAGAGACAGAAGATGTCACTTTTAAGCTTGGTGACT
ATTATGATGACCCTACTGTTTTAAGATATTTGGAAAGGCTGGAAGGTGGTGGTGCTTCAC
CTTTAGCTGCTGCTGCAGCTATTGCAAGGATTGGAGCTGAAGCTACAGCTGTGCTTGATA
GTGTTAAGGCTAGTGCAATTCAGGCACTGCAGAAAGTTTTTCCTGCTGGGGACGGGGAAG
GCAGTGTAAGACGATATGGTGACAATGAGATGAACGAATTTGATATTGCTAAGCCATTTG
AGGATCTTGAAGAACTCCGTGATCAAAATAACTTTATTACGACTGTTGGGGATCCTGAGA
GAAAGAGTTCTAACTATCAAGAGCAAGATGTGATAACTGACAGAATAAAAGATGCAAGTC
TGAAGATTATGTGTGCTGGAGTAGCGGTTGGTTTCTTTACTTTGGTTGGATTGAAGCTTT
CTTCCTTTAGACATGGGTCTTCAGTTCAACATTGTGCTAGTGCTACTGGTTCAGCCATTG
CCTCGGATGTCATCAATGTGGATACCTCTGCCTCACCAGTTGAAAATCCTCTTGAGGTTC
CTAGAATGGATGCAAGACTTGCAGAAAGTATAGTTCGGAAGTGGCAGAATATCAAATCCC
AGTCTCTTGGAACCGATCACTGTCTCAACAGATTGTCAGAGGTTTTGGATGGTCAGATGC
TGAAGATTTGGACAGACCGTGCAAGAGAAATTGCGCAGCATGGTTGGTTTTGGGAGTACA
AGCTTTTAAACCTTGCCATTGACAGTGTAACTGTCTCAGCTGATGGCCGACGTGCTACTG
TGGAAGCTACTCTAGAGGAATCAGCAAGTTTAACTGATGTAGCCCATCCAGAGCACAATG
ACTCATACAGTACTACCTATACAACTAGGTACGACATGTCCTGGGCAAACTCCGGTTGGA
AAATTGTGGAAGGAGCCGTTCTTAAATCGCGATAATGGATGTATATGTTGACAAAGTTTC
ATGTAAAGTGCATCTTTTTGATTATTTTGCTTTACTTTCAAAGTCAGGTAAATGGTTAGT
TTCGGCTAATTATAATGTACCTTGTTTGGATCAAAGAATTGTTGAGTGTAGTCGAAAAAA
ATGATCAGGATTCATCTCGAGTTAAATGCTATAATGAACAAAGGTTATCGTTGCCGAATT
TGTGCTGAGTATGCAATGTATAGGTTTTATATACTTATATTTTGGTCTTTTTTGTACATA
TTTTGTGAACTAGTTGGCCTAATTGTATTGACAAGTATCCCAGGAAAAAAACCAAACAGA
GAAGGAGAAGGAAAAGAAGGTTTTGTGGGTTTACATTCCAACCAGAACAAAAAAACTGCA
AAATATGATGCCTTTTGAAGACAATTATCCTATGCTGTCCCAATGATTTTGAGTCTTGTT
TTACATACATATAAGCTGCAATATATCTTCCACTTATATCTACATACAGGGATGACTCTC
TGAACTTGAGATCTCGAGGTTGTGGATTGAATATACATAATGTACATTAATAAGGCTCGG
TCGATGAGTAGGGAGAAGGTGTATTAAGTACAAGTATGGGACATCTTTTGTGTATATTTA
GATACTATGGGGGTGGTTTAACTTCTAAACTTTACATGAATTAGGGGGGGTTAATTCATT
TTGAAGCCACTACAATGCTTCAAATAATCCTTAAATCTTTTGCATTAGAAGATCACATTA
GGCTTTTCTTGGTTTCCAGCTGAAAGACCTGAGATTTTTTGGCCCTGGTGAGAAGTTGAG
TTCAAACATCTCTTTTGGGACTTCGTTTTGTGCTTCGAATCCAACTAATTTTGAGATGAG
TGCTGCACTTTCCTTAATGTGATCCATGTCTTTGGTATCTTTCCATAACTGATGGCACAG
TTGAAGTCTTCTTTTTTTAGTTTTAAGACCAATGCCCCGTTTCTCGTATAAG