Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g081020.3.1
CDS Infomation

Zinc finger, B-box (AHRD V3.3 *** A0A103XBE6_CYNCS)
Sequence

ATGAAGATCCAGTGTGATGTGTGTAACAATAATGAAGCCTCTGTTTTTTGTGTTGCTGAT
GAAGCTGCTCTTTGTGATTCTTGTGATCATCGTGTTCATCATGCTAACAAACTTGCTAGC
AAACATCAACGTTTCTCTCTAATTCAACCTTCACCTAAACAAATACCTGTTTGCGATATT
TGTCAGGAAAGAAGGGCGTTTTTGTTTTGTCAACAAGACAGAGCAATTTTATGTAGAGAG
TGTGATGTTTCGATACACAAAGCTAATGAACATACACAGAAACATAATAGATTTCTATTA
ACTGGTGTCAAAATCTCAGCGAATTCTTCGCTTTATACTTCCTCAGAATCAGTATCAGCA
GCTTCATGTAGTGCGAATCAAGATTCTGTTACCAATCTCAATAAGCCTCAAATTTGCACA
AAAAAGACTTCCCCTGTTTCTGGTTCTGTTCCTCAACAACAAGTGTCAGTAGCAGCTAAT
ATTGGGGAAAATAGTTACACAAGTAGTATATCAGAGTACTTAGAGATGCTACCTGGATGG
CATGTTGAAGAATTGCTGAATGCCTCAACAATTCCTACTAATGGTTTCTGTAAGATTGGT
GATAATGATGTATTTCCGATTTGGGATTCTGAGATTGAGAGCAGTATGAATTCATTCTCA
CCAGAAAATATAGGCATTTGGGTACCTCAAGCACCTCCAGCTCTCACTCCTCAGAAGAAT
CAGAACCAAGTTTTCCCTCGGAATATAAACTTTGGTGGACAAATTGAATTCAAGAATATG
AAGGAAGTTACAAGTAAAAAGTCAAGTAGAAAGTGGAGAGATGACAATTCTTTTGCTGTT
CCACAAATCAGCCCATCATCATCTTCTATTTCCTTCAAAAGATCAAGAACTCTTTGGTAG

Peptide Sequence

PEP ID

Solyc04g081020.3.1
PEP Infomation

Zinc finger, B-box (AHRD V3.3 *** A0A103XBE6_CYNCS)
Sequence

MKIQCDVCNNNEASVFCVADEAALCDSCDHRVHHANKLASKHQRFSLIQPSPKQIPVCDI
CQERRAFLFCQQDRAILCRECDVSIHKANEHTQKHNRFLLTGVKISANSSLYTSSESVSA
ASCSANQDSVTNLNKPQICTKKTSPVSGSVPQQQVSVAANIGENSYTSSISEYLEMLPGW
HVEELLNASTIPTNGFCKIGDNDVFPIWDSEIESSMNSFSPENIGIWVPQAPPALTPQKN
QNQVFPRNINFGGQIEFKNMKEVTSKKSSRKWRDDNSFAVPQISPSSSSISFKRSRTLW*

Transcript Sequence

Transcript ID

Solyc04g081020.3.1
Transcript Infomation

Zinc finger, B-box (AHRD V3.3 *** A0A103XBE6_CYNCS)
Sequence

TTCTTCTCTATCTCTTTACCAATTTTCAACGCACCCCACAATATTTCCTTTCTTATAAGC
TCTCCATTTCTGCACTTTTCTCTATCATCTTCTTCTTCAATTTTTTTTTTTCAATTTTGA
TCTATAATTTAATTAATCAAATGAAGATCCAGTGTGATGTGTGTAACAATAATGAAGCCT
CTGTTTTTTGTGTTGCTGATGAAGCTGCTCTTTGTGATTCTTGTGATCATCGTGTTCATC
ATGCTAACAAACTTGCTAGCAAACATCAACGTTTCTCTCTAATTCAACCTTCACCTAAAC
AAATACCTGTTTGCGATATTTGTCAGGAAAGAAGGGCGTTTTTGTTTTGTCAACAAGACA
GAGCAATTTTATGTAGAGAGTGTGATGTTTCGATACACAAAGCTAATGAACATACACAGA
AACATAATAGATTTCTATTAACTGGTGTCAAAATCTCAGCGAATTCTTCGCTTTATACTT
CCTCAGAATCAGTATCAGCAGCTTCATGTAGTGCGAATCAAGATTCTGTTACCAATCTCA
ATAAGCCTCAAATTTGCACAAAAAAGACTTCCCCTGTTTCTGGTTCTGTTCCTCAACAAC
AAGTGTCAGTAGCAGCTAATATTGGGGAAAATAGTTACACAAGTAGTATATCAGAGTACT
TAGAGATGCTACCTGGATGGCATGTTGAAGAATTGCTGAATGCCTCAACAATTCCTACTA
ATGGTTTCTGTAAGATTGGTGATAATGATGTATTTCCGATTTGGGATTCTGAGATTGAGA
GCAGTATGAATTCATTCTCACCAGAAAATATAGGCATTTGGGTACCTCAAGCACCTCCAG
CTCTCACTCCTCAGAAGAATCAGAACCAAGTTTTCCCTCGGAATATAAACTTTGGTGGAC
AAATTGAATTCAAGAATATGAAGGAAGTTACAAGTAAAAAGTCAAGTAGAAAGTGGAGAG
ATGACAATTCTTTTGCTGTTCCACAAATCAGCCCATCATCATCTTCTATTTCCTTCAAAA
GATCAAGAACTCTTTGGTAGTTGGATCCAATCATCTTCTTTTTTCAAAAAAATTTCCCTA
GTTTGA