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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g080930.3.1
CDS Infomation

RING/U-box superfamily protein (AHRD V3.3 *-* AT2G42030.1)
Sequence

ATGGGATCGGGAGAACCTTCTAGAACTTCAACCAATGCCGGAAACAGTGACGGCGGTGGC
GCATCAACTTCCGGCAGCAGCGTCAAGAGATTTCCGCTCGCAGCGCAGCCGGAGATTATG
AGGGCCGCCGAGAAAGATGACCAGTATGCCTCCTTCGTCTATGAAGCTTGCCGTGATGCT
TTTCGTCACCTCTTCGGTCTCTCTTACTACCCTATCTGTGGTACAAGAGTAGCTGTAACT
TACCAGAACGAGGCAAAACTCTTAGGGCAGATGCTCTATTATATGCTGACAACAGGTGCA
GGGAAGCAAACATTAGGAGAAGAATACTGTGATATCACTCAGGTTGCAGGACCATATGGA
CTTTCGCCAACACCTGCAAGACGTACTCTTTTTATCTTCTATCAGTCAGCTGTTCCATAT
ATTGCAGAAAGAGTCAGTTCTAGAGCAGCTTCCCATGGCATCACCCTGGCTGATTCAATG
GTGGATTATGCATTTAGGGATGATCCTACTTCAAGCAACGAAGCTGAGGCATCACCCACT
TTTGAGATACGCTCATCTTCAACATCCACTCCATCAATTTCAGCTTTTTCAAGATTGAAA
GCCAAGATAAGGGATTTCTGGTTGTATACAGTTCGAAGGTGGCCTTCGATGCTTCCCCTT
GCTCGTGAAATCTTGCAATTGGTTATCCGGGCCAATCTCATGTTCTTCTATTTTGAAGGG
CTTTATTATCATATATCAAAACGTGCTGCAGGCATACACTATGTGTTCATTGGAAAACCT
ATGAACCAGCGACCTAGATATCAAATACTAGGGGTCTTCCTTCTAATTCAATTATGTATT
CTTGCTGCTGAAGGTCTGAGACGTAGTAGTTTATCATCGGTTTCAACTTCTGCTCAACAA
GCACCCTTTGGAACCTATCAAACTTCTGCAGGCCGAGGTTTACCAGTTTTAAATGAGGAA
GGCAATCTAATAACTGCAGAAACTGAGAAGTATGGATTGGTTGCTGAATCCACATCAACC
TCAGAGTCTCAAGGAAACAGTCCAAGCAAATGCACACTTTGCCTAAGCAGCCGCCAACAT
CCAACAGCCACACCTTGTGGTCATGTATTTTGCTGGAACTGCATAATGGAATGGTGCAAT
GAAAAGCCTGAATGTCCCCTTTGTCGTTCTCCCGTAACACATTCAAGCTTGGTTTGTCTG
TATCATTCAGATTTTTAG

Peptide Sequence

PEP ID

Solyc04g080930.3.1
PEP Infomation

RING/U-box superfamily protein (AHRD V3.3 *-* AT2G42030.1)
Sequence

MGSGEPSRTSTNAGNSDGGGASTSGSSVKRFPLAAQPEIMRAAEKDDQYASFVYEACRDA
FRHLFGLSYYPICGTRVAVTYQNEAKLLGQMLYYMLTTGAGKQTLGEEYCDITQVAGPYG
LSPTPARRTLFIFYQSAVPYIAERVSSRAASHGITLADSMVDYAFRDDPTSSNEAEASPT
FEIRSSSTSTPSISAFSRLKAKIRDFWLYTVRRWPSMLPLAREILQLVIRANLMFFYFEG
LYYHISKRAAGIHYVFIGKPMNQRPRYQILGVFLLIQLCILAAEGLRRSSLSSVSTSAQQ
APFGTYQTSAGRGLPVLNEEGNLITAETEKYGLVAESTSTSESQGNSPSKCTLCLSSRQH
PTATPCGHVFCWNCIMEWCNEKPECPLCRSPVTHSSLVCLYHSDF*

Transcript Sequence

Transcript ID

Solyc04g080930.3.1
Transcript Infomation

RING/U-box superfamily protein (AHRD V3.3 *-* AT2G42030.1)
Sequence

ATGGGATCGGGAGAACCTTCTAGAACTTCAACCAATGCCGGAAACAGTGACGGCGGTGGC
GCATCAACTTCCGGCAGCAGCGTCAAGAGATTTCCGCTCGCAGCGCAGCCGGAGATTATG
AGGGCCGCCGAGAAAGATGACCAGTATGCCTCCTTCGTCTATGAAGCTTGCCGTGATGCT
TTTCGTCACCTCTTCGGTCTCTCTTACTACCCTATCTGTGGTACAAGAGTAGCTGTAACT
TACCAGAACGAGGCAAAACTCTTAGGGCAGATGCTCTATTATATGCTGACAACAGGTGCA
GGGAAGCAAACATTAGGAGAAGAATACTGTGATATCACTCAGGTTGCAGGACCATATGGA
CTTTCGCCAACACCTGCAAGACGTACTCTTTTTATCTTCTATCAGTCAGCTGTTCCATAT
ATTGCAGAAAGAGTCAGTTCTAGAGCAGCTTCCCATGGCATCACCCTGGCTGATTCAATG
GTGGATTATGCATTTAGGGATGATCCTACTTCAAGCAACGAAGCTGAGGCATCACCCACT
TTTGAGATACGCTCATCTTCAACATCCACTCCATCAATTTCAGCTTTTTCAAGATTGAAA
GCCAAGATAAGGGATTTCTGGTTGTATACAGTTCGAAGGTGGCCTTCGATGCTTCCCCTT
GCTCGTGAAATCTTGCAATTGGTTATCCGGGCCAATCTCATGTTCTTCTATTTTGAAGGG
CTTTATTATCATATATCAAAACGTGCTGCAGGCATACACTATGTGTTCATTGGAAAACCT
ATGAACCAGCGACCTAGATATCAAATACTAGGGGTCTTCCTTCTAATTCAATTATGTATT
CTTGCTGCTGAAGGTCTGAGACGTAGTAGTTTATCATCGGTTTCAACTTCTGCTCAACAA
GCACCCTTTGGAACCTATCAAACTTCTGCAGGCCGAGGTTTACCAGTTTTAAATGAGGAA
GGCAATCTAATAACTGCAGAAACTGAGAAGTATGGATTGGTTGCTGAATCCACATCAACC
TCAGAGTCTCAAGGAAACAGTCCAAGCAAATGCACACTTTGCCTAAGCAGCCGCCAACAT
CCAACAGCCACACCTTGTGGTCATGTATTTTGCTGGAACTGCATAATGGAATGGTGCAAT
GAAAAGCCTGAATGTCCCCTTTGTCGTTCTCCCGTAACACATTCAAGCTTGGTTTGTCTG
TATCATTCAGATTTTTAG