Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g080770.3.1
CDS Infomation

GTP-binding protein, HflX (AHRD V3.3 *** AT5G57960.1)
Sequence

ATGAGTTTATGCTTCTGCTCCAATTTGAAACCATCAATTCTCTTCCCGGAGTCCAAATTC
CGATGGATTCAGACCCGTACCCGACCCGTTTCCTTCACTAAGCTAATCCAAACAAAGTAC
AGTTACCGTGGATGCATTAAAGCCGTCGGAGAAGAAATCGGAGTTCTATCGCCGGACGAC
AGCTTATCGGAGCGAAATCCGGTAATTGAAGAGGAACCAGTACCGGAAACCGAGGTGAAT
GAAGTAGAAAATGGAGTTGCTAGTGTTGTTGCTGAAGGAAAAGCTCAAACTTGGATAAGT
AAGAGTGAGAACAAGGAAAAATTGGATGAGGAAGATGAAAATGCTAGTAGATTCAAGCTA
CGTAATGGTAAAGAGGTTTTTGAAGAGAAAGCCTACCTAGTGGGTGTTGCGTGCAAAGGT
GATACAGAAGATTCATTTGGTATAGAGGAATCACTCAAGGAATTGGCTCAGCTGGCTGAT
ACTGCCGGACTACTGGTTGTTGATTCTACATATCAGAAGCTATCTTCTCCCAATCCGAGG
ACTTACATAGGATCTGGAAAGGTTTCAGAAATCAAAAGCGCAATTCGTGCATTTGATGTT
GAGACTGTTATATTTGATGATGAACTTTCACCCGGACAATTGCGTAATTTGGAGAAGGCT
TTTGGTGGAGATGTTAGAGTGTGTGATCGCACTGCTCTCATACTGGATATTTTCAACCAG
CGTGCAGCAACCCGTGAAGCATCTTTACAGGTGTCATTGGCACAAATGGAATACCAATTA
CCACGGTTAACCCGTATGTGGACTCACCTTGAGCGTCAAGCTGGAGGGCAGGTCAAGGGT
ATGGGTGAAAAACAGATCGAAGTAGACAAGAGAATTTTACGTACTCAAATTGGTGTACTA
AAAAAAGAGCTAGAATCTGTTCGGAAGCATCGTAAACAATACAGGAACCGTCGTGTCTCT
GTACCTGTCCCTGTTGTATCTTTGGTTGGATACACAAATGCCGGAAAAAGTACACTTCTT
AACCAGTTGACTGGGGCTGATGTTCTTGCCGAGGATCAATTATTCGCTACACTTGATCCT
ACTACAAGAAGGGTGCAGATGAAGAATGGGAAGGAGTTCCTGCTTACAGATACTGTTGGC
TTCATCCAAAAATTACCGACAACTCTGGTTGCAGCCTTTAGGGCAACACTTGAAGAAATC
GCTGAGTCTTCAATTTTAGTGCATGTTGTGGACATCAGTCACCCACTAGCAGAGCAACAG
ATAGAGGCTGTTGAGAAAGTTCTTTCAGAACTGGATACATCATCAATACCAAAGTTGATG
TTGTGGAACAAGGTTGATAAAGCTGAAGATCCAGAGAAAATCAAGTTAGAAGCCAAGATG
AGAAACGATGTGGTTTGCGTCTCTGCTTTAACTGGTGAAGGGTTGGATGAATTCTGCAAC
GAAATCCAGAATAGACTAAAGGATGCAATGGTATGGGTGGAAGCCTTGATCCCTTTTGAT
AAAGGGGAACTCCTCAGTACGATACATCAAGTCGGAATGGTTGAGAGAACTGAATACTCT
GAGAAAGGAACTCTTGTGAGAGCACATGTTCCCCTCCGATTTGCAAGGCTTCTAACTCCT
ATGAGGCAAATGTGTGTATCATAA

Peptide Sequence

PEP ID

Solyc04g080770.3.1
PEP Infomation

GTP-binding protein, HflX (AHRD V3.3 *** AT5G57960.1)
Sequence

MSLCFCSNLKPSILFPESKFRWIQTRTRPVSFTKLIQTKYSYRGCIKAVGEEIGVLSPDD
SLSERNPVIEEEPVPETEVNEVENGVASVVAEGKAQTWISKSENKEKLDEEDENASRFKL
RNGKEVFEEKAYLVGVACKGDTEDSFGIEESLKELAQLADTAGLLVVDSTYQKLSSPNPR
TYIGSGKVSEIKSAIRAFDVETVIFDDELSPGQLRNLEKAFGGDVRVCDRTALILDIFNQ
RAATREASLQVSLAQMEYQLPRLTRMWTHLERQAGGQVKGMGEKQIEVDKRILRTQIGVL
KKELESVRKHRKQYRNRRVSVPVPVVSLVGYTNAGKSTLLNQLTGADVLAEDQLFATLDP
TTRRVQMKNGKEFLLTDTVGFIQKLPTTLVAAFRATLEEIAESSILVHVVDISHPLAEQQ
IEAVEKVLSELDTSSIPKLMLWNKVDKAEDPEKIKLEAKMRNDVVCVSALTGEGLDEFCN
EIQNRLKDAMVWVEALIPFDKGELLSTIHQVGMVERTEYSEKGTLVRAHVPLRFARLLTP
MRQMCVS*

Transcript Sequence

Transcript ID

Solyc04g080770.3.1
Transcript Infomation

GTP-binding protein, HflX (AHRD V3.3 *** AT5G57960.1)
Sequence

CAAAAATACGACTGGAGATATTAAAGCTTAAAATAGAATACGGCATAATATCCACAAAAA
AATCGCTTTAATCATGAGTTTATGCTTCTGCTCCAATTTGAAACCATCAATTCTCTTCCC
GGAGTCCAAATTCCGATGGATTCAGACCCGTACCCGACCCGTTTCCTTCACTAAGCTAAT
CCAAACAAAGTACAGTTACCGTGGATGCATTAAAGCCGTCGGAGAAGAAATCGGAGTTCT
ATCGCCGGACGACAGCTTATCGGAGCGAAATCCGGTAATTGAAGAGGAACCAGTACCGGA
AACCGAGGTGAATGAAGTAGAAAATGGAGTTGCTAGTGTTGTTGCTGAAGGAAAAGCTCA
AACTTGGATAAGTAAGAGTGAGAACAAGGAAAAATTGGATGAGGAAGATGAAAATGCTAG
TAGATTCAAGCTACGTAATGGTAAAGAGGTTTTTGAAGAGAAAGCCTACCTAGTGGGTGT
TGCGTGCAAAGGTGATACAGAAGATTCATTTGGTATAGAGGAATCACTCAAGGAATTGGC
TCAGCTGGCTGATACTGCCGGACTACTGGTTGTTGATTCTACATATCAGAAGCTATCTTC
TCCCAATCCGAGGACTTACATAGGATCTGGAAAGGTTTCAGAAATCAAAAGCGCAATTCG
TGCATTTGATGTTGAGACTGTTATATTTGATGATGAACTTTCACCCGGACAATTGCGTAA
TTTGGAGAAGGCTTTTGGTGGAGATGTTAGAGTGTGTGATCGCACTGCTCTCATACTGGA
TATTTTCAACCAGCGTGCAGCAACCCGTGAAGCATCTTTACAGGTGTCATTGGCACAAAT
GGAATACCAATTACCACGGTTAACCCGTATGTGGACTCACCTTGAGCGTCAAGCTGGAGG
GCAGGTCAAGGGTATGGGTGAAAAACAGATCGAAGTAGACAAGAGAATTTTACGTACTCA
AATTGGTGTACTAAAAAAAGAGCTAGAATCTGTTCGGAAGCATCGTAAACAATACAGGAA
CCGTCGTGTCTCTGTACCTGTCCCTGTTGTATCTTTGGTTGGATACACAAATGCCGGAAA
AAGTACACTTCTTAACCAGTTGACTGGGGCTGATGTTCTTGCCGAGGATCAATTATTCGC
TACACTTGATCCTACTACAAGAAGGGTGCAGATGAAGAATGGGAAGGAGTTCCTGCTTAC
AGATACTGTTGGCTTCATCCAAAAATTACCGACAACTCTGGTTGCAGCCTTTAGGGCAAC
ACTTGAAGAAATCGCTGAGTCTTCAATTTTAGTGCATGTTGTGGACATCAGTCACCCACT
AGCAGAGCAACAGATAGAGGCTGTTGAGAAAGTTCTTTCAGAACTGGATACATCATCAAT
ACCAAAGTTGATGTTGTGGAACAAGGTTGATAAAGCTGAAGATCCAGAGAAAATCAAGTT
AGAAGCCAAGATGAGAAACGATGTGGTTTGCGTCTCTGCTTTAACTGGTGAAGGGTTGGA
TGAATTCTGCAACGAAATCCAGAATAGACTAAAGGATGCAATGGTATGGGTGGAAGCCTT
GATCCCTTTTGATAAAGGGGAACTCCTCAGTACGATACATCAAGTCGGAATGGTTGAGAG
AACTGAATACTCTGAGAAAGGAACTCTTGTGAGAGCACATGTTCCCCTCCGATTTGCAAG
GCTTCTAACTCCTATGAGGCAAATGTGTGTATCATAATTGCTTCAAGTCACCAAAATACA
TATACTTGAAGTGCAACAACACAAGCACATCATGATTACGGCGAACATAAATTGTAACTC
AAGTAGATGATGAATGTGAAACTCCCAACACAAGAATCTCCAGATTGTGGCTTCTGACGA
ACATGCATAATTATAGTAAACAAGAATTACTAGAAGTCATCCATCTCCTCACATCAGCAA
TCCGTTGCTGAAGAAAAAGCCGGTATGCTTGTTCAAAGGAATTTGTGCTCGATTGGTTTA
CATTATTCGTACTTCTGTACTCACCAACTGCTGCTTCTGTACATAGAAATATCTCGTCAC
ACGTAACTACTTTGTTACACTGTTCCTTCTCCCCATTGTACAAATTGACCTAATATTCCT
AAACAGTTGATCGCGTGACATGCGCAGTTTGACCTGGCTTGTCTATGTGAGCTGTAGAGA
ATGTTCTGTTTTATCAGCAAGATGATTTTCTTTGTAGTTGTAGCTTTCTTCTGTGTTTAA
AAGTCATGTTAGTACATTTACTTTAGCTCATATTTCTTTTACCAAGTCTTGTTGTCCCAG
ATTTATAATGTACTTCGTTTTACTCACTATTTTACTTTGTATAATATATAGTAGTGTGAG
ATGAGCTAAATGAAGCGATATAATTAGAAGTGATATTGT