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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g080750.3.1
CDS Infomation

TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (AHRD V3.3 *** AT1G35180.1)
Sequence

ATGGACGATTCAATACTAAATTTGATAGTATTTGGAGTTATATCATGGACAACATTATTT
TTATTAGCAAGAAAGTTATTCCCAAATCGTTCTTTCGATTTTTGCAATCGTTTAGTTTCA
ACTATTCATGCAATTTTAGCAGTAATTTTAAGTTCAATTTCTGTTCAAGATTGGAATTGT
CCACTTTGTCCTTTGGCTTCAAGATCTTCTCACAAGCAGATGAGGGCATTGGGAGTGACA
GTAGGGTACCTTATTTATGATTTTGTATGTTGTCTTTTTGACAAACAAGTGAAGATTGAT
AACTTAATTCATCATTTGGTGAGTGTTATTGGACTTGGAGCTGGCCTTGCCTATGAATGG
TGTGGTTCAGAAATGGTAGCAGCATTGTGTGTGACAGAAATTTCTAGTCCATTTTTACAC
ATGAGAGAAATTCTCAAAGAGCTTGGATACAAAGACACTGACTTTAATCTTGCAGCTGAT
GTTTTATTTGCAGTGATTTTTAGTTGTGCTAGGATGATAGGGGGCCCATATCTAACTTAT
GTGACTCTTTTTGCTGATAATCCAATTCTCATTAAGGCCATGGCTTTGGGATTGCAACTT
GTTAGTGCTTTTTGGTTTTACAAAATTGCTAGGATGATTATGTACAAATTTTCTAAGAGA
AATAAAGCTAAAATAGTTCATTCAAATTAG

Peptide Sequence

PEP ID

Solyc04g080750.3.1
PEP Infomation

TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (AHRD V3.3 *** AT1G35180.1)
Sequence

MDDSILNLIVFGVISWTTLFLLARKLFPNRSFDFCNRLVSTIHAILAVILSSISVQDWNC
PLCPLASRSSHKQMRALGVTVGYLIYDFVCCLFDKQVKIDNLIHHLVSVIGLGAGLAYEW
CGSEMVAALCVTEISSPFLHMREILKELGYKDTDFNLAADVLFAVIFSCARMIGGPYLTY
VTLFADNPILIKAMALGLQLVSAFWFYKIARMIMYKFSKRNKAKIVHSN*

Transcript Sequence

Transcript ID

Solyc04g080750.3.1
Transcript Infomation

TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein (AHRD V3.3 *** AT1G35180.1)
Sequence

TTTTTTTTCTATTTAAACTGCTATCTTGGGCCTGTTAGTGTATCTATTATGGGCCTGTTT
GTTCTTACTAGCTAATAATTGGGTCAATAACATAGTGACACAAATAGACACAATTACAAA
CTTTGAACAATAACCAAACTCCCCCTTTGAATATTTTTTTGAAATTGAATAATTTTTTTA
GTATAGTAGGTAACCAATAATTTCCCAAAATTGAAAAAAAAATAATATAATTCTTAGCTA
GAAGTAGGTTAACGTACATTAGAACATTAATGCATTGAATTTCAACCGTCTACTTATACC
AGCTGCCCATTTTTTAATATACATTTAATGAATTTTGTTGCCGACATTTAATTTCTTGTG
TTATTTTTTCCTTAAACATATCTATTTTTATTATTATATTTTATATATTTTTTGTATCAA
GAGAATTAATTTGCTCCTTCAGATGGACGATTCAATACTAAATTTGATAGTATTTGGAGT
TATATCATGGACAACATTATTTTTATTAGCAAGAAAGTTATTCCCAAATCGTTCTTTCGA
TTTTTGCAATCGTTTAGTTTCAACTATTCATGCAATTTTAGCAGTAATTTTAAGTTCAAT
TTCTGTTCAAGATTGGAATTGTCCACTTTGTCCTTTGGCTTCAAGATCTTCTCACAAGCA
GATGAGGGCATTGGGAGTGACAGTAGGGTACCTTATTTATGATTTTGTATGTTGTCTTTT
TGACAAACAAGTGAAGATTGATAACTTAATTCATCATTTGGTGAGTGTTATTGGACTTGG
AGCTGGCCTTGCCTATGAATGGTGTGGTTCAGAAATGGTAGCAGCATTGTGTGTGACAGA
AATTTCTAGTCCATTTTTACACATGAGAGAAATTCTCAAAGAGCTTGGATACAAAGACAC
TGACTTTAATCTTGCAGCTGATGTTTTATTTGCAGTGATTTTTAGTTGTGCTAGGATGAT
AGGGGGCCCATATCTAACTTATGTGACTCTTTTTGCTGATAATCCAATTCTCATTAAGGC
CATGGCTTTGGGATTGCAACTTGTTAGTGCTTTTTGGTTTTACAAAATTGCTAGGATGAT
TATGTACAAATTTTCTAAGAGAAATAAAGCTAAAATAGTTCATTCAAATTAGGTAATTTG
TCCACTTGTGTATCGAACATTCATATATACAAAGTTCATTCTTATTTGTTAAGTGAGAAA
AGTTCTTTATAGGCACCGCATAGATTTTAATCAAAATGAGAACCACTACACTTATGAGAT
GTATTTTTGCTGGCACAAATATAAGTGGTGGT