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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g080610.3.1
CDS Infomation

ornithine carbamoyltransferase
Sequence

ATGGCCGCCATTTTCTCTCACTTAACTTCCCTCCGATCACCCGATGCCGTTTCATTCTCC
TCTCTCTCAAGCTCTGGCATTCAGTCGTATCGCTTTTCAGGCGTATTTGCATCTTTTCCG
ATCACTTTTCCGGCCACTAGTCAACGTGTCTCATGCCAGGCGACCTCTCCGGCAGCATCT
CCGTCTTCGTCCGTCAATGTAAATGCTAGTCAGAAGGACTTTTTGCACATCACTGATTTT
GACAAATCAACTCTTTTGAACATCTTGGATCGAGCCAAAGAGGTCAAAGAACTTATAAAA
TCAGGGGAGAGGACATATCTCCCATTTAAAGGTAAAACTATGGCGATGATCTTTGCTAAG
CCATCCATGAGGACTCGGGTTTCCTTTGAGACAGGGTTTTACTTGCTTGGTGGGCATGCT
ATATACCTGGGACCAGATGACATTCAGATGGGTAAACGGGAAGAAACTCGTGATATTGCT
CGTGTTCTGTCTCGCTACAATGATATCATTATGGCCCGAGTTTTTGCTCATCAGGACATT
CTAGATCTTGCTAAATATGCAACTGTACCGGTGATTAACGGCCTTACAGACTACAACCAT
CCTTGCCAAATTATGGCAGATGCCCTCACAATAATTGAACATGTTGGTCAGCTGGAAGGA
ACTAAGGTTGTCTATATTGGAGATGGAAATAACATAGTGCATTCTTGGTTGCTACTTGCT
TCAGTAATTCCTTTCCACTTTGTATGTGCTTGTCCAAAAGGTTTTGAACCTGATGAAGAA
ACAGTTAAGAAAGCACAAGATGCTGGAATCAGCAAAATCGAGATAACTAATGATCCAAAG
GAAGCAATTAGAGGAGCTGATGTTGTATATTCTGATGTCTGGGCGAGTATGGGACAAAAA
GAAGAAGCTGCACAGCGTCGTCAGGTGTTTCAAGGATTCCAGGTTGACGAAGAACTCATG
AAAATAGCTGGACGGAAGGCTTATTTTATGCACTGTTTGCCTGCAGAAAGGGGAGTTGAA
GTCACTAATGGCGTGGTTGAAGCACCAAACTCAATTGTATTTCCCCAAGCTGAAAACCGG
ATGCACGCACAAAATGCAATCATGCTTCATGTAATGGGCTTGTAA

Peptide Sequence

PEP ID

Solyc04g080610.3.1
PEP Infomation

ornithine carbamoyltransferase
Sequence

MAAIFSHLTSLRSPDAVSFSSLSSSGIQSYRFSGVFASFPITFPATSQRVSCQATSPAAS
PSSSVNVNASQKDFLHITDFDKSTLLNILDRAKEVKELIKSGERTYLPFKGKTMAMIFAK
PSMRTRVSFETGFYLLGGHAIYLGPDDIQMGKREETRDIARVLSRYNDIIMARVFAHQDI
LDLAKYATVPVINGLTDYNHPCQIMADALTIIEHVGQLEGTKVVYIGDGNNIVHSWLLLA
SVIPFHFVCACPKGFEPDEETVKKAQDAGISKIEITNDPKEAIRGADVVYSDVWASMGQK
EEAAQRRQVFQGFQVDEELMKIAGRKAYFMHCLPAERGVEVTNGVVEAPNSIVFPQAENR
MHAQNAIMLHVMGL*

Transcript Sequence

Transcript ID

Solyc04g080610.3.1
Transcript Infomation

ornithine carbamoyltransferase
Sequence

AATAAAAGAAATTAAAGCTGACAAATGTAGACGTAAACTATGCTTGAGTAGGGTTTATTA
ACAAATCCACTGTACTGACCTTTACCATCTGAACTTGTTTAACCATGGCCGCCATTTTCT
CTCACTTAACTTCCCTCCGATCACCCGATGCCGTTTCATTCTCCTCTCTCTCAAGCTCTG
GCATTCAGTCGTATCGCTTTTCAGGCGTATTTGCATCTTTTCCGATCACTTTTCCGGCCA
CTAGTCAACGTGTCTCATGCCAGGCGACCTCTCCGGCAGCATCTCCGTCTTCGTCCGTCA
ATGTAAATGCTAGTCAGAAGGACTTTTTGCACATCACTGATTTTGACAAATCAACTCTTT
TGAACATCTTGGATCGAGCCAAAGAGGTCAAAGAACTTATAAAATCAGGGGAGAGGACAT
ATCTCCCATTTAAAGGTAAAACTATGGCGATGATCTTTGCTAAGCCATCCATGAGGACTC
GGGTTTCCTTTGAGACAGGGTTTTACTTGCTTGGTGGGCATGCTATATACCTGGGACCAG
ATGACATTCAGATGGGTAAACGGGAAGAAACTCGTGATATTGCTCGTGTTCTGTCTCGCT
ACAATGATATCATTATGGCCCGAGTTTTTGCTCATCAGGACATTCTAGATCTTGCTAAAT
ATGCAACTGTACCGGTGATTAACGGCCTTACAGACTACAACCATCCTTGCCAAATTATGG
CAGATGCCCTCACAATAATTGAACATGTTGGTCAGCTGGAAGGAACTAAGGTTGTCTATA
TTGGAGATGGAAATAACATAGTGCATTCTTGGTTGCTACTTGCTTCAGTAATTCCTTTCC
ACTTTGTATGTGCTTGTCCAAAAGGTTTTGAACCTGATGAAGAAACAGTTAAGAAAGCAC
AAGATGCTGGAATCAGCAAAATCGAGATAACTAATGATCCAAAGGAAGCAATTAGAGGAG
CTGATGTTGTATATTCTGATGTCTGGGCGAGTATGGGACAAAAAGAAGAAGCTGCACAGC
GTCGTCAGGTGTTTCAAGGATTCCAGGTTGACGAAGAACTCATGAAAATAGCTGGACGGA
AGGCTTATTTTATGCACTGTTTGCCTGCAGAAAGGGGAGTTGAAGTCACTAATGGCGTGG
TTGAAGCACCAAACTCAATTGTATTTCCCCAAGCTGAAAACCGGATGCACGCACAAAATG
CAATCATGCTTCATGTAATGGGCTTGTAATTGCATTGTCTGTTCTAATACTGAGATTGTT
CCTAGACACAGTATTTTGTTTGGTACATTATGTCTGTTTATAGAACTCCAGCGATCTCTT
TATGCTCATATTGGTCTTCGTCTTTTAGACGTTAATCCTATAAATAAATGTCTCCAACTC
TCTATAGGGTATAGATTAGTTACAATCTCCACTTGATCGTAACAATCCAAAGGCCCTAGA
AGATCTTTTCTCTTGTTTCAGAAGTGGAG