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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g080480.1.1
CDS Infomation

4-coumarate--CoA ligase-like 4 (AHRD V3.3 *** 4CLL4_ARATH)
Sequence

ATGAATTATGAAAATTATGATCCTTTTTTCCCTGACCAACCTGTTGTGGATCTTTATCTT
CCAATTTGGGCTAAACTTTCAAGTTTTAAGTCCAAACCAGCTTTCATTTGGGCTGAAGAT
GGCCCATTGGATCAGTTTTCGTCGATCACTTACGAGGAGTTGAATAGTTCAGCCCAATGT
ATTTCTTGTGAATTGTTACTTAGTTTAAGAAAAAATGATGTTGTTGTTGTTTTATGTTCA
CCAGGACTTGAATTTGTTGAAGTGATTTTTGGGTGTCAAAGGGCTGGAGTTTTAGCTGTT
CCTATTAGCCCTCCTCACCCGTCTTTTTCGAGTGGTAATTGGCATCATTTACTTAGAGTT
GTGTCTCAAACAAGGCCTAAAGTTGCTATAGCACAACGCGAATACATCAAACATGTTGAG
AAGTATGTTGCAACATCGAGTAATAAGAAGTTGTCCGACGCCTTGAAGAAGATTCGATGG
ATTTCAACCGAGGATTTCAAGGGCAAGAAAATGAAAATGCAAGTTGAAAATGTGAATGTT
GGTTACAATGGTTGCAATGTTGATGATGTTTACTTGATTCAGTACACTTCTGGTACAACT
GCTATTCCTAAGCCTGTTTTAGTGACTGCAGGCTCTGCAGCTCATAACGTTAGAGTCGCG
AGGAGAGCTTATGATTTACAGCCAAATACTGTTGTTGTTTCGTGGTTACCTCAGTACCAT
GATTGTGGACTTATGTTTTTGTTGTTGACGATTGTTTCAGGGGCAACGTGTGTGTTGACA
TCCCCGAGTACATTTGTCAATCGTCCTAGGATTTGGCTTGAATTGATATCAGAGTTCAAG
GCAACTTGCACTCCTGTTCCTTCATTTGCTTTGCCTCTCGTGTTGAAACGTGGTCATACT
GAGGCAACGGTTACAGGAACTGTTAGCAATCCTATTAGTATGTTGAGCTTGATGAATTTG
ATCATCGTTAACGAGCCAATTTACAATGATTCTATCGAAGAATTTGTTGAAGTTTTTAGG
CCTTTTGGGCTAAATCCTTTGGCAATTTCTCCTTCATATGGCTTAGCTGAGAATGGCACA
TTTGTTTCAACATCATGGAGAAGTAGTAAGTTTAACAAATTTTCGACGTATAAAAAGCTC
TTGCCAAGTGCTAGGCTTGATGAAGACCAAGTAGACATTGAAATTCTTGTTGTGAATGAA
GATACAAATGAGATTGTTGAAGATGGAATTGAAGGTGAAATATGGATTTCATCTCCTAGC
AATGCTATTGGATATTTAGCACATCCCTCTCTAACTCAACAAGTGTTCAACGCCACGCTT
AAAAACAAGGCGGGAAAATGCTATGTTCGAACAGGGGATAGAGGAGTCATCAAAGGAGAA
GAGAGATTTTTATACGTTACAGGACGATGTTCAGATGCTATTAAACTCTCAAATGGACAA
GAAATTCATCCACATTATTTGGAGACATTAGCTTATAATAGTTGTCCAAATTTCCTGAGA
GGTGGTTGTGTTGCAGCATTTGAGATGTCTGAATCTGAATACACATCTATAGTAGCTGTT
GTCGTGGAGGTACAAAGCAAATGTGAAATAGAGAGTGATATGTTTTTGAAGCAAATATGT
GAAGGAATAAGAAAAACAATGTTGAAAGAAGAAGGTGTTGGTATTGGACTTGTGGTACTT
GTTAAATTTGGAAATGTACCAAAGACTACTTCTGGGAAAATACAAAGATGGCTTGCTAAG
TATAAATTTGAGAAGTCACAAATGAATATCATAATGCAAATGAAGTTTGATAATAATGGT
TATATTCAAAGCACAATGCAAAAAATGATACAAATTGGGAAAAAAGAGGCTAAAAAGGGA
AAAAAAGTGCTAGTTGTTGAAGAAGAAGAAGGGCTATTTTTTGCTCCAACAAATAAGACT
CTGAAATCTTCTCTTTAA

Peptide Sequence

PEP ID

Solyc04g080480.1.1
PEP Infomation

4-coumarate--CoA ligase-like 4 (AHRD V3.3 *** 4CLL4_ARATH)
Sequence

MNYENYDPFFPDQPVVDLYLPIWAKLSSFKSKPAFIWAEDGPLDQFSSITYEELNSSAQC
ISCELLLSLRKNDVVVVLCSPGLEFVEVIFGCQRAGVLAVPISPPHPSFSSGNWHHLLRV
VSQTRPKVAIAQREYIKHVEKYVATSSNKKLSDALKKIRWISTEDFKGKKMKMQVENVNV
GYNGCNVDDVYLIQYTSGTTAIPKPVLVTAGSAAHNVRVARRAYDLQPNTVVVSWLPQYH
DCGLMFLLLTIVSGATCVLTSPSTFVNRPRIWLELISEFKATCTPVPSFALPLVLKRGHT
EATVTGTVSNPISMLSLMNLIIVNEPIYNDSIEEFVEVFRPFGLNPLAISPSYGLAENGT
FVSTSWRSSKFNKFSTYKKLLPSARLDEDQVDIEILVVNEDTNEIVEDGIEGEIWISSPS
NAIGYLAHPSLTQQVFNATLKNKAGKCYVRTGDRGVIKGEERFLYVTGRCSDAIKLSNGQ
EIHPHYLETLAYNSCPNFLRGGCVAAFEMSESEYTSIVAVVVEVQSKCEIESDMFLKQIC
EGIRKTMLKEEGVGIGLVVLVKFGNVPKTTSGKIQRWLAKYKFEKSQMNIIMQMKFDNNG
YIQSTMQKMIQIGKKEAKKGKKVLVVEEEEGLFFAPTNKTLKSSL*

Transcript Sequence

Transcript ID

Solyc04g080480.1.1
Transcript Infomation

4-coumarate--CoA ligase-like 4 (AHRD V3.3 *** 4CLL4_ARATH)
Sequence

ATGAATTATGAAAATTATGATCCTTTTTTCCCTGACCAACCTGTTGTGGATCTTTATCTT
CCAATTTGGGCTAAACTTTCAAGTTTTAAGTCCAAACCAGCTTTCATTTGGGCTGAAGAT
GGCCCATTGGATCAGTTTTCGTCGATCACTTACGAGGAGTTGAATAGTTCAGCCCAATGT
ATTTCTTGTGAATTGTTACTTAGTTTAAGAAAAAATGATGTTGTTGTTGTTTTATGTTCA
CCAGGACTTGAATTTGTTGAAGTGATTTTTGGGTGTCAAAGGGCTGGAGTTTTAGCTGTT
CCTATTAGCCCTCCTCACCCGTCTTTTTCGAGTGGTAATTGGCATCATTTACTTAGAGTT
GTGTCTCAAACAAGGCCTAAAGTTGCTATAGCACAACGCGAATACATCAAACATGTTGAG
AAGTATGTTGCAACATCGAGTAATAAGAAGTTGTCCGACGCCTTGAAGAAGATTCGATGG
ATTTCAACCGAGGATTTCAAGGGCAAGAAAATGAAAATGCAAGTTGAAAATGTGAATGTT
GGTTACAATGGTTGCAATGTTGATGATGTTTACTTGATTCAGTACACTTCTGGTACAACT
GCTATTCCTAAGCCTGTTTTAGTGACTGCAGGCTCTGCAGCTCATAACGTTAGAGTCGCG
AGGAGAGCTTATGATTTACAGCCAAATACTGTTGTTGTTTCGTGGTTACCTCAGTACCAT
GATTGTGGACTTATGTTTTTGTTGTTGACGATTGTTTCAGGGGCAACGTGTGTGTTGACA
TCCCCGAGTACATTTGTCAATCGTCCTAGGATTTGGCTTGAATTGATATCAGAGTTCAAG
GCAACTTGCACTCCTGTTCCTTCATTTGCTTTGCCTCTCGTGTTGAAACGTGGTCATACT
GAGGCAACGGTTACAGGAACTGTTAGCAATCCTATTAGTATGTTGAGCTTGATGAATTTG
ATCATCGTTAACGAGCCAATTTACAATGATTCTATCGAAGAATTTGTTGAAGTTTTTAGG
CCTTTTGGGCTAAATCCTTTGGCAATTTCTCCTTCATATGGCTTAGCTGAGAATGGCACA
TTTGTTTCAACATCATGGAGAAGTAGTAAGTTTAACAAATTTTCGACGTATAAAAAGCTC
TTGCCAAGTGCTAGGCTTGATGAAGACCAAGTAGACATTGAAATTCTTGTTGTGAATGAA
GATACAAATGAGATTGTTGAAGATGGAATTGAAGGTGAAATATGGATTTCATCTCCTAGC
AATGCTATTGGATATTTAGCACATCCCTCTCTAACTCAACAAGTGTTCAACGCCACGCTT
AAAAACAAGGCGGGAAAATGCTATGTTCGAACAGGGGATAGAGGAGTCATCAAAGGAGAA
GAGAGATTTTTATACGTTACAGGACGATGTTCAGATGCTATTAAACTCTCAAATGGACAA
GAAATTCATCCACATTATTTGGAGACATTAGCTTATAATAGTTGTCCAAATTTCCTGAGA
GGTGGTTGTGTTGCAGCATTTGAGATGTCTGAATCTGAATACACATCTATAGTAGCTGTT
GTCGTGGAGGTACAAAGCAAATGTGAAATAGAGAGTGATATGTTTTTGAAGCAAATATGT
GAAGGAATAAGAAAAACAATGTTGAAAGAAGAAGGTGTTGGTATTGGACTTGTGGTACTT
GTTAAATTTGGAAATGTACCAAAGACTACTTCTGGGAAAATACAAAGATGGCTTGCTAAG
TATAAATTTGAGAAGTCACAAATGAATATCATAATGCAAATGAAGTTTGATAATAATGGT
TATATTCAAAGCACAATGCAAAAAATGATACAAATTGGGAAAAAAGAGGCTAAAAAGGGA
AAAAAAGTGCTAGTTGTTGAAGAAGAAGAAGGGCTATTTTTTGCTCCAACAAATAAGACT
CTGAAATCTTCTCTTTAA