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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g080190.3.1
CDS Infomation

Outer envelope pore protein 24B, chloroplastic (AHRD V3.3 *** OP24B_ARATH)
Sequence

ATGAAGGCTTCATTCAAAGCACGATATGAGCCCGACAAAGCCGCCGCCAACGCTACTGTT
GCATTCAACGCCGGCGACCTTAAGCTCCGAGCCTCCATGACCGATGCTACTGTTGTCAAA
GGTCCCAGCTTAAACGGATTAGCTCTGGCCGTTGAGAAACCTGGATTGTTCATCGTCGAC
TACAACGTCCCGAAGAAGGACATTAGGTTTCAATTTATGAACTCAATCAAGGTTCTGGAG
AAGCCATTGAATTTGAATTACATTCATTTTCATGGAGACAAGCGAACAATATTGGATGGA
ACTTTGGTGGTTGATTCTGCCAACAAGGTGTCGGCTAATCACGTCATGGGCTCAGGAAGT
TGTAAATTAAAGTACACATATGTCCACGGAGGAATCACTACTTTCGAGCCCATCTATGAT
ACAGCAAAGAATGCGTGGGACTTCATGGTATCACGTAAAGTTTATGGGGATGACGTGTTT
AAGGCTACTTATCAGACAACAAGCAAAAATTTGGGGCTCGAATGGTCCAGGAGTTCTAAG
TTAAATGGATCATTTAAGATTTGTGCATCTCTCTGTTTGCTTGAGGAACGCAAAATCCCA
AAGTTAAGTGCTGAGACGTCGTGGGACTTTGAAATGTGA

Peptide Sequence

PEP ID

Solyc04g080190.3.1
PEP Infomation

Outer envelope pore protein 24B, chloroplastic (AHRD V3.3 *** OP24B_ARATH)
Sequence

MKASFKARYEPDKAAANATVAFNAGDLKLRASMTDATVVKGPSLNGLALAVEKPGLFIVD
YNVPKKDIRFQFMNSIKVLEKPLNLNYIHFHGDKRTILDGTLVVDSANKVSANHVMGSGS
CKLKYTYVHGGITTFEPIYDTAKNAWDFMVSRKVYGDDVFKATYQTTSKNLGLEWSRSSK
LNGSFKICASLCLLEERKIPKLSAETSWDFEM*

Transcript Sequence

Transcript ID

Solyc04g080190.3.1
Transcript Infomation

Outer envelope pore protein 24B, chloroplastic (AHRD V3.3 *** OP24B_ARATH)
Sequence

AAAAGTTACTTTATTGTATTTATGAAATTTTCCCCTTACGGGGCATGTTTGTCTTATCCA
TTCAGTTGAACAAATTAGAATGCCGGCCCCAAGTGTTAGAGCCATCCATCAGCAATTTCC
TAATTCCTAAACCTCAAATCTCCTCCTCCTTATCCCGCTCGCTAGAGAATCGAAAAAAAT
CGAATACAGTCCATTTTTCACTCGGCGACGATGAAGGCTTCATTCAAAGCACGATATGAG
CCCGACAAAGCCGCCGCCAACGCTACTGTTGCATTCAACGCCGGCGACCTTAAGCTCCGA
GCCTCCATGACCGATGCTACTGTTGTCAAAGGTCCCAGCTTAAACGGATTAGCTCTGGCC
GTTGAGAAACCTGGATTGTTCATCGTCGACTACAACGTCCCGAAGAAGGACATTAGGTTT
CAATTTATGAACTCAATCAAGGTTCTGGAGAAGCCATTGAATTTGAATTACATTCATTTT
CATGGAGACAAGCGAACAATATTGGATGGAACTTTGGTGGTTGATTCTGCCAACAAGGTG
TCGGCTAATCACGTCATGGGCTCAGGAAGTTGTAAATTAAAGTACACATATGTCCACGGA
GGAATCACTACTTTCGAGCCCATCTATGATACAGCAAAGAATGCGTGGGACTTCATGGTA
TCACGTAAAGTTTATGGGGATGACGTGTTTAAGGCTACTTATCAGACAACAAGCAAAAAT
TTGGGGCTCGAATGGTCCAGGAGTTCTAAGTTAAATGGATCATTTAAGATTTGTGCATCT
CTCTGTTTGCTTGAGGAACGCAAAATCCCAAAGTTAAGTGCTGAGACGTCGTGGGACTTT
GAAATGTGATTCTGTTTCTTCTGCAATAATTCGGATGTAACTACTTCTGGCTACCCTTCA
TAATTGGGTTTCACCTAATGTTTTCTAGCTCAATTTGTTGATTCACAAGTGAGCTGTTCG
TTTTGCTTTGTAATCGGTTTATGGTTACCAACATGAGTATTGATCCAAAGTTGTTTTTTG
TCAATCTTCCGATTTCAAGACACTTCCATGTTTTGATGCCCTGACTTTACCTGAATTAAT
GATTTAAGGCTCCATCAAAATGATGTATCTGCTGTCTTCTTCCTAGCTTTATTTGGTGAT
TTTGACTTCTGAGATTTTCAATCTAAATTTTTTCTGTGCTCCTGCCTTTTGTTCTTGGCT
CAATTACATTCAC