Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g080140.3.1
CDS Infomation

Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase (AHRD V3.3 *** A0A061FJS0_THECC)
Sequence

ATGCCTATCTGCCAACTTAACCTTTTTCCTGGAGAAACTACAGTAATTTGGTTATCAATA
GACGTCCCGAGTGAACAGACACCAGGGCAATATGAGGGAGAAATCATCATTTCCGCCTCC
AAAGCTGAAGCAGAATCTACAAACCAATCCCTGAGCAAACTGGAGAAGCATCAATTATAC
AGAGAACTGAGAGACTGCGTTGATACTGTGGAGCCCTTAGAGGGGAAACCATTGGAAGAA
GTGGTAGAAAGGGTCAAATCTGCAACTTCATCTTTAAGAAGAGTTCTTCTATCCCCATTG
TTTTCTGATTTCTTTTCAGATAATGGGCCCATAGATATGATGGAAGAGGATGCTTTTTCT
AGCCTTTCAATCCGTTTGAAAATAAGTTTGACAGTCTGGGACTTTGTGCTTCCAGCTACC
CCTTCTGTCCCTGCTGTGATTGGTATATCTGATACTGTTATTGAAGATCGATTTGGGGTT
GAGCACGGAAGTAATGAATGGTTTGAGCTGTTAGATCAGCATTTCAAATGGCTACTTCAG
TATCGAATCAGTCCATACTTCTGCAGGTGGGGCAACGGCATGAGAGTTTTGACATACACC
TCACCATGGCCAGCTGACCATCCAAAATCAGACGAGTATTTCTCTGACCCTCGTCTTGCG
GCATATGCTGTACCTAATGGTCCGATAGTCCCCTGCGGCGATATTGCGAAGGACTACTTA
CGAAGGGAGGTAGAGATATTAAGAACAAAAAAACATTGGAGGAAAGCATACTTCTATCTG
TGGGATGAGCCTCTTAACATTGAACAATATACTTCCCTCCGCCGCATGGCCAGTGATATT
CATGCCTATGCACCTGATGCTCGTATTCTGACAACTTATTATTGCGGACCAAGTGATGCA
CCTCTTGCTACAAATAACTTTGAGGCTTTTCTGAAAGTTCCTGCGTTCCTACGTCCTCAT
ACTCAGATATATTGCACAAGCGAATGGGTTATTGGTAACAGAGAGGATCTGGCGAAGGAT
ATTATCGCGGAGATACAAACAGAAAACGGAGAGGAGTGGTGGACATATGTATGCTTGGGA
CCAGGTGATCCTCATCCCAACTGGCACTTGGGGATGCGAGGCACTCAACACCGTGCTGTG
ATGTGGCGTGTGTGGAAAGAAGGTGGAACAGGTTTCTTATATTGGGGTGCCAACTGCTAT
GAGAAGGCAACAGTTCCTAGTGCTGAGATTAAGTTCAGGCGCGGCCTTCCTCCAGGTGAT
GGAGTTTTATTCTATCCTGGTCAGGTGTTCTCATCATCTCAGCAACCTGTTGCTTCACTG
AGACTAGAGAGGCTCTTGAGTGGCTTACAGGATATTGAGTACCTCAAGCTGTATGCTTCA
AGATATGGTAGGGATGAAAGCCTCAACCTTTTGGAGAAGACAGGAATGTATCTAGGGCCT
GAGCGCTACACTTCGGAACACAGACCAATAGATGTCATGAGGGGTGAGGTTTACAGGACA
TGCCAATCGTAA

Peptide Sequence

PEP ID

Solyc04g080140.3.1
PEP Infomation

Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase (AHRD V3.3 *** A0A061FJS0_THECC)
Sequence

MPICQLNLFPGETTVIWLSIDVPSEQTPGQYEGEIIISASKAEAESTNQSLSKLEKHQLY
RELRDCVDTVEPLEGKPLEEVVERVKSATSSLRRVLLSPLFSDFFSDNGPIDMMEEDAFS
SLSIRLKISLTVWDFVLPATPSVPAVIGISDTVIEDRFGVEHGSNEWFELLDQHFKWLLQ
YRISPYFCRWGNGMRVLTYTSPWPADHPKSDEYFSDPRLAAYAVPNGPIVPCGDIAKDYL
RREVEILRTKKHWRKAYFYLWDEPLNIEQYTSLRRMASDIHAYAPDARILTTYYCGPSDA
PLATNNFEAFLKVPAFLRPHTQIYCTSEWVIGNREDLAKDIIAEIQTENGEEWWTYVCLG
PGDPHPNWHLGMRGTQHRAVMWRVWKEGGTGFLYWGANCYEKATVPSAEIKFRRGLPPGD
GVLFYPGQVFSSSQQPVASLRLERLLSGLQDIEYLKLYASRYGRDESLNLLEKTGMYLGP
ERYTSEHRPIDVMRGEVYRTCQS*

Transcript Sequence

Transcript ID

Solyc04g080140.3.1
Transcript Infomation

Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase (AHRD V3.3 *** A0A061FJS0_THECC)
Sequence

GGTCTTTCATTTATCTGAGTGTCTATTGCATCTAGATCTTATAGCTCTTTTGCCAAAAGT
TGAGTATCAGAGCTAAATCTCAGCTTGGTACGCAAATCAGGCGGGAAGGGACCTTTCGTA
CAGTAAGTAATAGAGACAGAAGTATATTCAGCGGAAATTTTTCAACATACCCAAGTTTCA
ACTCTTCTTGTGGAGATGTATCTGTCAAAAAATTATCTTATCTATTATTGTGATGCTTGC
AGCATGCTTATTAAATCTGAATTGACCAGTTGAGTTATGGATGAAGAAGCGAAGAAAGAT
AGGAGAAGATAATGATTTGCATCTTCTCAAATTCTTGGAGGTTTCACCCATGGAGCAATG
AGCAGTATCTTACCGTTATTAACTTGGATATTTCTGTAGGGGACCACCAGGAGATGGTTG
TTCCACCAGTTGAAGGTGTTGCTGGTGGTGGGACAGCTTATGGATGGAGTGACACTGGAG
TAAATGATCCAAGACCATTAAGGGGTGCAATCGATCCTACAAAAGTTCCATCTTCGGAGT
TATTGAATGTGTGGTGCATGCCAAACACTGCTAATGTCGGACCACAAGACATGCCTCGTG
ATTTAGAATCTATATCACTATTAGCAGCAAGAAATGAAAGAGAAAGCATTCAGATTGCTA
TAAGCCCAAAAGTTTCTTGGGGTGGATCTGGAATTGCTGGAACTGTGCAGGTTCAGTGTA
CTGATCTCTGCTCACCCTGTGGTTCTAGGTTTGCCACTACTCATGTTCTTAGCTTCATTT
GCACCTATCTAGGGAGTTCCTGATGCACTTGTTCCACTCGATATGCCTATCTGCCAACTT
AACCTTTTTCCTGGAGAAACTACAGTAATTTGGTTATCAATAGACGTCCCGAGTGAACAG
ACACCAGGGCAATATGAGGGAGAAATCATCATTTCCGCCTCCAAAGCTGAAGCAGAATCT
ACAAACCAATCCCTGAGCAAACTGGAGAAGCATCAATTATACAGAGAACTGAGAGACTGC
GTTGATACTGTGGAGCCCTTAGAGGGGAAACCATTGGAAGAAGTGGTAGAAAGGGTCAAA
TCTGCAACTTCATCTTTAAGAAGAGTTCTTCTATCCCCATTGTTTTCTGATTTCTTTTCA
GATAATGGGCCCATAGATATGATGGAAGAGGATGCTTTTTCTAGCCTTTCAATCCGTTTG
AAAATAAGTTTGACAGTCTGGGACTTTGTGCTTCCAGCTACCCCTTCTGTCCCTGCTGTG
ATTGGTATATCTGATACTGTTATTGAAGATCGATTTGGGGTTGAGCACGGAAGTAATGAA
TGGTTTGAGCTGTTAGATCAGCATTTCAAATGGCTACTTCAGTATCGAATCAGTCCATAC
TTCTGCAGGTGGGGCAACGGCATGAGAGTTTTGACATACACCTCACCATGGCCAGCTGAC
CATCCAAAATCAGACGAGTATTTCTCTGACCCTCGTCTTGCGGCATATGCTGTACCTAAT
GGTCCGATAGTCCCCTGCGGCGATATTGCGAAGGACTACTTACGAAGGGAGGTAGAGATA
TTAAGAACAAAAAAACATTGGAGGAAAGCATACTTCTATCTGTGGGATGAGCCTCTTAAC
ATTGAACAATATACTTCCCTCCGCCGCATGGCCAGTGATATTCATGCCTATGCACCTGAT
GCTCGTATTCTGACAACTTATTATTGCGGACCAAGTGATGCACCTCTTGCTACAAATAAC
TTTGAGGCTTTTCTGAAAGTTCCTGCGTTCCTACGTCCTCATACTCAGATATATTGCACA
AGCGAATGGGTTATTGGTAACAGAGAGGATCTGGCGAAGGATATTATCGCGGAGATACAA
ACAGAAAACGGAGAGGAGTGGTGGACATATGTATGCTTGGGACCAGGTGATCCTCATCCC
AACTGGCACTTGGGGATGCGAGGCACTCAACACCGTGCTGTGATGTGGCGTGTGTGGAAA
GAAGGTGGAACAGGTTTCTTATATTGGGGTGCCAACTGCTATGAGAAGGCAACAGTTCCT
AGTGCTGAGATTAAGTTCAGGCGCGGCCTTCCTCCAGGTGATGGAGTTTTATTCTATCCT
GGTCAGGTGTTCTCATCATCTCAGCAACCTGTTGCTTCACTGAGACTAGAGAGGCTCTTG
AGTGGCTTACAGGATATTGAGTACCTCAAGCTGTATGCTTCAAGATATGGTAGGGATGAA
AGCCTCAACCTTTTGGAGAAGACAGGAATGTATCTAGGGCCTGAGCGCTACACTTCGGAA
CACAGACCAATAGATGTCATGAGGGGTGAGGTTTACAGGACATGCCAATCGTAAATTTGA
AGCTCGAGTTTGATGACACCCATCTGTATCAATGTAAAGCATCTCAATCATATCGGTTTG
TATGATGTATATTTATAGATTTGAGAAAACAATCTTGAGTTATACATCTCAATCATATTT
ACTAGGTCAAAACAGAGTATATTTAAGTCAGTTTGCCCTGATCTGTACATATTATCATGT
TCAAGTAATAGTAGTAAATGCATGGTGTCGCTGTAATGTGATTTTGTATTTTGAAGATGA
ATTATGGCTGATTCAATTTCAGTACAACTGAATATATCGTATCATAGGTTACTTAGACTA
AAATTTGAA