Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g080130.3.1
CDS Infomation

Zinc finger protein (AHRD V3.3 *** K9P0T0_9ROSI)
Sequence

ATGGCAGAGATTGAAAAATCAGCTGAAGAATCAATCATACAGCAAAATTTTCCAGTAAAG
AGGAAAAGGAATCTTCCTGGAAATCCTGATCCAGAAGCAGAAGTGATAGCTCTATCGCCG
AGAACTCTTATGGCGACGAACCGATTTGTTTGTGAGATTTGTAACAAAGGTTTTCAAAGA
GATCAGAATTTACAGCTTCATCGGAGAGGACACAACTTGCCATGGAAACTGCGGCAACGA
ACGAGTAATGAAGTGAAAAAACGTGTTTACGTTTGTCCAGAATCGTCATGCGTTCATCAT
GATCCTTCTAGAGCTTTAGGCGATCTCACTGGAATTAAGAAGCATTTCTGCAGAAAACAT
GGTGAGAAGAAGTTTAAATGTGAACGTTGCACCAAAAAATACGCTGTTCATTCCGATTGG
AAAGCACACATGAAAACTTGTGGTACTAGAGAGTATCGTTGTGATTGTGGAACTTTATTT
TCCAGGAGGGATAGCTTCATAACTCATAGAGCATTTTGTGATGCATTAGCTCAAGAAAGT
GCAAGATCTCATCAACCATTAATGGAGGATACAAATGCTGAAGGTGATTTGAAGGTTGAT
GAAGCTATAAACAAAACGGTGTCGTCTTCATCTAGTCCTCCACCACAACCTTTAACTCCA
TCAACTAGCGTTCTTTCTCCAGTTCTGTCCATTCAAAGTTCAGAGTTGCCTGTAGAATAT
CAAAATCAAGGTGGAGTACAAATACAACAAGCACAGGGTACAACAACACCTGTTTCTACC
ACCCCTGTCATCACAATTTCCACTGCTGCTGCTAGTGGTCCTAGTAGTAGCAAGGTGTTT
GCTAGTGTGTTTCCATCGTCGTCATCAGCTCAGCATGTTAACTCGTCTTACTCGGATATT
CTACGTGCTATTGAGACCGAGCAAGTGATGGCTGTAGAGCCCATATCGCTCTCATTGTCA
TCTTCTCTTTACTTGTCTAATAATAGGGCAAGTTTATTCCAAGAACACACTGGTGGCCAC
GGCCACGGCCATGGCCAGCATTATGGTTCAGCAACAATGCAGCCAGCATTATCTGCAACT
GCATTACTTCAAAAAGCAGCCCAAATGGGGTCAACAACTTCAAACAACTCGTTTCTCCGT
GGCCTTGGATTGGCAATGTCACCGAGTACTTCTACACCGGAGGAGAATTCACTAGCAAGG
AGGACTAATGCTCTTGGCCATGTGAAGCTAGAGAGCAATATTAATGCAGAGGTACCCGGG
CTCGGGATACAACTTCATGGTCATTCAGGATTTACTGACTTGATGATGGGTCCATCCATA
TCTCATCAGACATCTATGATGTTCGGAAGCAAACCTCCGACTCTTGATTTTCTTGGTTTA
GGAAATGGTGCTAGTGGAACTCCATCAAACGGATTTTCAGCGTTTTTAAGCTCAATGGAA
GACGGATTTGGTGTTGTAGCTGAGCCTTGGGATGACCCTTCTGATAGAAAACCTGCTATG
CTCTAG

Peptide Sequence

PEP ID

Solyc04g080130.3.1
PEP Infomation

Zinc finger protein (AHRD V3.3 *** K9P0T0_9ROSI)
Sequence

MAEIEKSAEESIIQQNFPVKRKRNLPGNPDPEAEVIALSPRTLMATNRFVCEICNKGFQR
DQNLQLHRRGHNLPWKLRQRTSNEVKKRVYVCPESSCVHHDPSRALGDLTGIKKHFCRKH
GEKKFKCERCTKKYAVHSDWKAHMKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQES
ARSHQPLMEDTNAEGDLKVDEAINKTVSSSSSPPPQPLTPSTSVLSPVLSIQSSELPVEY
QNQGGVQIQQAQGTTTPVSTTPVITISTAAASGPSSSKVFASVFPSSSSAQHVNSSYSDI
LRAIETEQVMAVEPISLSLSSSLYLSNNRASLFQEHTGGHGHGHGQHYGSATMQPALSAT
ALLQKAAQMGSTTSNNSFLRGLGLAMSPSTSTPEENSLARRTNALGHVKLESNINAEVPG
LGIQLHGHSGFTDLMMGPSISHQTSMMFGSKPPTLDFLGLGNGASGTPSNGFSAFLSSME
DGFGVVAEPWDDPSDRKPAML*

Transcript Sequence

Transcript ID

Solyc04g080130.3.1
Transcript Infomation

Zinc finger protein (AHRD V3.3 *** K9P0T0_9ROSI)
Sequence

CTTGAAAATGATTTTACACTTTACATATCTCTATTATGACAGCTTTCAAAAATAGTCTCT
TCTCTTTCAAACTCTGTGTGTTCTAATCCAAAAAAACAAAACCGCCGCCATGTATGAACA
TTAAAGCTCTTCTTCCCATTTTTTTCTCTTCTTCAAGAAAAAAAAAGAACTTTCTTCTTT
AGGGAACACAACAATTCCCAAAAATAAGTGTAGAATTTTTCCTAGTTTTGGGAATCGTTT
ATTGATTTTCTGGTGTAAACTGTGAAGAGGCTGAAAGGGGAGAAAACAAAGTATTAGCTG
AAAAACATATGTAAAAATCTGAAGTTTTCTAAGCTATAAATATGGCAGAGATTGAAAAAT
CAGCTGAAGAATCAATCATACAGCAAAATTTTCCAGTAAAGAGGAAAAGGAATCTTCCTG
GAAATCCTGATCCAGAAGCAGAAGTGATAGCTCTATCGCCGAGAACTCTTATGGCGACGA
ACCGATTTGTTTGTGAGATTTGTAACAAAGGTTTTCAAAGAGATCAGAATTTACAGCTTC
ATCGGAGAGGACACAACTTGCCATGGAAACTGCGGCAACGAACGAGTAATGAAGTGAAAA
AACGTGTTTACGTTTGTCCAGAATCGTCATGCGTTCATCATGATCCTTCTAGAGCTTTAG
GCGATCTCACTGGAATTAAGAAGCATTTCTGCAGAAAACATGGTGAGAAGAAGTTTAAAT
GTGAACGTTGCACCAAAAAATACGCTGTTCATTCCGATTGGAAAGCACACATGAAAACTT
GTGGTACTAGAGAGTATCGTTGTGATTGTGGAACTTTATTTTCCAGGAGGGATAGCTTCA
TAACTCATAGAGCATTTTGTGATGCATTAGCTCAAGAAAGTGCAAGATCTCATCAACCAT
TAATGGAGGATACAAATGCTGAAGGTGATTTGAAGGTTGATGAAGCTATAAACAAAACGG
TGTCGTCTTCATCTAGTCCTCCACCACAACCTTTAACTCCATCAACTAGCGTTCTTTCTC
CAGTTCTGTCCATTCAAAGTTCAGAGTTGCCTGTAGAATATCAAAATCAAGGTGGAGTAC
AAATACAACAAGCACAGGGTACAACAACACCTGTTTCTACCACCCCTGTCATCACAATTT
CCACTGCTGCTGCTAGTGGTCCTAGTAGTAGCAAGGTGTTTGCTAGTGTGTTTCCATCGT
CGTCATCAGCTCAGCATGTTAACTCGTCTTACTCGGATATTCTACGTGCTATTGAGACCG
AGCAAGTGATGGCTGTAGAGCCCATATCGCTCTCATTGTCATCTTCTCTTTACTTGTCTA
ATAATAGGGCAAGTTTATTCCAAGAACACACTGGTGGCCACGGCCACGGCCATGGCCAGC
ATTATGGTTCAGCAACAATGCAGCCAGCATTATCTGCAACTGCATTACTTCAAAAAGCAG
CCCAAATGGGGTCAACAACTTCAAACAACTCGTTTCTCCGTGGCCTTGGATTGGCAATGT
CACCGAGTACTTCTACACCGGAGGAGAATTCACTAGCAAGGAGGACTAATGCTCTTGGCC
ATGTGAAGCTAGAGAGCAATATTAATGCAGAGGTACCCGGGCTCGGGATACAACTTCATG
GTCATTCAGGATTTACTGACTTGATGATGGGTCCATCCATATCTCATCAGACATCTATGA
TGTTCGGAAGCAAACCTCCGACTCTTGATTTTCTTGGTTTAGGAAATGGTGCTAGTGGAA
CTCCATCAAACGGATTTTCAGCGTTTTTAAGCTCAATGGAAGACGGATTTGGTGTTGTAG
CTGAGCCTTGGGATGACCCTTCTGATAGAAAACCTGCTATGCTCTAGCTAGAGTTTAGTT
GCATTAATGCAACGCCTGTACAAGGGCTTTGCTCGCGCGCTCATCACCACCTACCTACAT
TTCACATCTCGACACAGTGGAACGTGTAACCCGCCTGTCAGTGAAGCTCTCTATTCACAT
CCCCCTCAAAGTTTTTGAATTGGAGTTCAGTTTTTTGTTTGATATTTTATACATATGCAA
TAGTTGATAGGGATAGCTAAGTTATGTTCATAATCTTGATATTGCACCCTTTTGGTCTCT
CAACCAAACATCATTATGAGATTTTAGTTTAATTAGGAGAGTATAGTAGATGGATCTAGT
AGCTATTAGCTAGGTTTCTAAATTATTATGTAGTAATTATTATGTGAGAGAATAAGAAAA
TTTCTTTAATTTTCCACC