Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc04g080120.1.1
CDS Infomation	Pentatricopeptide repeat protein (AHRD V3.3 *** A0A1B3IPW0_CAPAN)
Sequence	ATGCTCTTTCATTCATGGAGAAAATCTCTATGCAACAGAGGTAACTTCTTCCCTTTAATC CAACTGTTTCCTTTATCGCATAGCCATGTATCTATATTTCATTCTTGCGCTTCTGTTCCC TCTAAATATCCTTCGTTTCGCAAAAAGCCATCGGTTTCTAAGAAGCGTAAAGTTGTAATT TTTAGGGAATTCAGAGATGTGAATAGTTTAAATGACGCCGTTTGTGTTTTTCATCGATTG GTCCGTAAAGAACCAGTTCCTTCTGTTGTAGAGTTAGCAAAATTGTTAAGAGTGATGATT AATATGAAAGAATATTCTGTTGTTATTTCGTTTTTCGGAGAGATGAGGAAGTTAGGGATT CCCTTTGATGAGTATATCTTGACTATTGTGATTAATTCTTTTTGCTTGCTGGGTTGTGCT GAAAATGGTTTTTCGATATTGGGTGTTTTTTTCAAGAGTGGTGTTCAGTTTAATGTGGTT ACTTTCAGTACTCTTATGAGGGGACTTTTTGAACAAAATAAGATTCAGGATGCTATGTGG TTGTTTAGGAAGCTGGTGAAAGAGAAAATTTGTAAGATGGATGAAGTTATGTTTGGTACA GTCATGAATGGGCTTTGTAAACAAGGGCATACTCAAACAGCTCTTAGTTTGTTGAGGATA ATGGAGCAAGGGGATGCCAAACCTAACACAGTTGTGTATAGTATTGTTGTAGATGCACTT TGTAAAGACCAAATGGTAGGTGCTGCTTTCAATCTTTTCAATGAGATGAAGCGAAAAGGG ATTACTCCGAATGTACATACGTATAGTTCACTGGTTGATGGTTTATGTAAGTTTGATCAG TGGGAAGAAGTTAGGCTGCTTTTGGATGAGATGACGCATCTTAATATTTTCCCGAATGTA CACACTTTTAGCATGTTGGTAGATGCATTTTGTAAAAAAGGTATGGTCGAAGATGCTGTG GAAGTGTTAAATGTAATGATCCAAAAAGGTGAACATCCTGATGTGGTTACCTTTAACGCT ATAATGGAAGGGTATTGTTTGCGCGGTGAAATAGATGTAGCAAGAAGAGTTTTAGGCTCT ATGACTGATATTGGTGTCAAGTGTGACATCTTTAGTTACAATATATTAGTCAATGGATAT TGCAAGCAGAAGAAACTAGACGAGGCCATGCATTTATATTGTGAAATCTCGCAAAAGGGG TTGAAACCTGACATTGTTACGTATTCTACTATCTTGCAAGGCCTTTTTGAAGTTGGCAGA GTTGAATGTTCTGAAAATTTATTTACTGAGATGCAAAATGCAGGTCATAGTCCTGACATT TACACTTGTGGCATTATGCTTCATGGTTATTTAAAAAATGGTCATGTAGAAAGAGCAATG TCCCTCTTTCATAGGTGGGAAAAACAAAAAGAAGATGCTTATATTTTGATCTATAATAGA GGCAATGATGGATTTTTTAAAATTCAAAAGCTTGATAAAGCTCGTTCGATTTTTGATAAG CTTTATTCCGTAGGGTTGCATCCTGATGTTATAAGATACAATGTAACAGTAAATGGACTT TGTATTGAAGGTTTAGTAGATGAAGCCAAAGAGTTGCTAAGAAAAATGGAGGACAATAGG TGTTCGCCGCACAATGCCACTTCCAATCTTATAGTGAATGGACTTCTCAAGAGTACTAAA ACTAATGAAGCAATGACCCTTTTGAAGGAAATCATCCAGAGAGGTTTCCCAGCTGATAGA GTCACGATGTCGTTGCTAATAGAACTACTCTTGTTAATAGGGGAAGGTCCTTTTTTGCTT AATATGATACCAGAACTTCATCTAAGAAATGAGAAATGA

Peptide Sequence

PEP ID	Solyc04g080120.1.1
PEP Infomation	Pentatricopeptide repeat protein (AHRD V3.3 *** A0A1B3IPW0_CAPAN)
Sequence	MLFHSWRKSLCNRGNFFPLIQLFPLSHSHVSIFHSCASVPSKYPSFRKKPSVSKKRKVVI FREFRDVNSLNDAVCVFHRLVRKEPVPSVVELAKLLRVMINMKEYSVVISFFGEMRKLGI PFDEYILTIVINSFCLLGCAENGFSILGVFFKSGVQFNVVTFSTLMRGLFEQNKIQDAMW LFRKLVKEKICKMDEVMFGTVMNGLCKQGHTQTALSLLRIMEQGDAKPNTVVYSIVVDAL CKDQMVGAAFNLFNEMKRKGITPNVHTYSSLVDGLCKFDQWEEVRLLLDEMTHLNIFPNV HTFSMLVDAFCKKGMVEDAVEVLNVMIQKGEHPDVVTFNAIMEGYCLRGEIDVARRVLGS MTDIGVKCDIFSYNILVNGYCKQKKLDEAMHLYCEISQKGLKPDIVTYSTILQGLFEVGR VECSENLFTEMQNAGHSPDIYTCGIMLHGYLKNGHVERAMSLFHRWEKQKEDAYILIYNR GNDGFFKIQKLDKARSIFDKLYSVGLHPDVIRYNVTVNGLCIEGLVDEAKELLRKMEDNR CSPHNATSNLIVNGLLKSTKTNEAMTLLKEIIQRGFPADRVTMSLLIELLLLIGEGPFLL NMIPELHLRNEK*

Transcript Sequence

Transcript ID	Solyc04g080120.1.1
Transcript Infomation	Pentatricopeptide repeat protein (AHRD V3.3 *** A0A1B3IPW0_CAPAN)
Sequence	ATGCTCTTTCATTCATGGAGAAAATCTCTATGCAACAGAGGTAACTTCTTCCCTTTAATC CAACTGTTTCCTTTATCGCATAGCCATGTATCTATATTTCATTCTTGCGCTTCTGTTCCC TCTAAATATCCTTCGTTTCGCAAAAAGCCATCGGTTTCTAAGAAGCGTAAAGTTGTAATT TTTAGGGAATTCAGAGATGTGAATAGTTTAAATGACGCCGTTTGTGTTTTTCATCGATTG GTCCGTAAAGAACCAGTTCCTTCTGTTGTAGAGTTAGCAAAATTGTTAAGAGTGATGATT AATATGAAAGAATATTCTGTTGTTATTTCGTTTTTCGGAGAGATGAGGAAGTTAGGGATT CCCTTTGATGAGTATATCTTGACTATTGTGATTAATTCTTTTTGCTTGCTGGGTTGTGCT GAAAATGGTTTTTCGATATTGGGTGTTTTTTTCAAGAGTGGTGTTCAGTTTAATGTGGTT ACTTTCAGTACTCTTATGAGGGGACTTTTTGAACAAAATAAGATTCAGGATGCTATGTGG TTGTTTAGGAAGCTGGTGAAAGAGAAAATTTGTAAGATGGATGAAGTTATGTTTGGTACA GTCATGAATGGGCTTTGTAAACAAGGGCATACTCAAACAGCTCTTAGTTTGTTGAGGATA ATGGAGCAAGGGGATGCCAAACCTAACACAGTTGTGTATAGTATTGTTGTAGATGCACTT TGTAAAGACCAAATGGTAGGTGCTGCTTTCAATCTTTTCAATGAGATGAAGCGAAAAGGG ATTACTCCGAATGTACATACGTATAGTTCACTGGTTGATGGTTTATGTAAGTTTGATCAG TGGGAAGAAGTTAGGCTGCTTTTGGATGAGATGACGCATCTTAATATTTTCCCGAATGTA CACACTTTTAGCATGTTGGTAGATGCATTTTGTAAAAAAGGTATGGTCGAAGATGCTGTG GAAGTGTTAAATGTAATGATCCAAAAAGGTGAACATCCTGATGTGGTTACCTTTAACGCT ATAATGGAAGGGTATTGTTTGCGCGGTGAAATAGATGTAGCAAGAAGAGTTTTAGGCTCT ATGACTGATATTGGTGTCAAGTGTGACATCTTTAGTTACAATATATTAGTCAATGGATAT TGCAAGCAGAAGAAACTAGACGAGGCCATGCATTTATATTGTGAAATCTCGCAAAAGGGG TTGAAACCTGACATTGTTACGTATTCTACTATCTTGCAAGGCCTTTTTGAAGTTGGCAGA GTTGAATGTTCTGAAAATTTATTTACTGAGATGCAAAATGCAGGTCATAGTCCTGACATT TACACTTGTGGCATTATGCTTCATGGTTATTTAAAAAATGGTCATGTAGAAAGAGCAATG TCCCTCTTTCATAGGTGGGAAAAACAAAAAGAAGATGCTTATATTTTGATCTATAATAGA GGCAATGATGGATTTTTTAAAATTCAAAAGCTTGATAAAGCTCGTTCGATTTTTGATAAG CTTTATTCCGTAGGGTTGCATCCTGATGTTATAAGATACAATGTAACAGTAAATGGACTT TGTATTGAAGGTTTAGTAGATGAAGCCAAAGAGTTGCTAAGAAAAATGGAGGACAATAGG TGTTCGCCGCACAATGCCACTTCCAATCTTATAGTGAATGGACTTCTCAAGAGTACTAAA ACTAATGAAGCAATGACCCTTTTGAAGGAAATCATCCAGAGAGGTTTCCCAGCTGATAGA GTCACGATGTCGTTGCTAATAGAACTACTCTTGTTAATAGGGGAAGGTCCTTTTTTGCTT AATATGATACCAGAACTTCATCTAAGAAATGAGAAATGA