Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g079940.3.1
CDS Infomation

NAC domain-containing protein (AHRD V3.3 *** A0A060A1D2_BOENI)
Sequence

ATGCGTCCTCTGTCTCCGTCAGCTTCACCTCCAGGCTTGATGAGTTCCTGTGGGACTGAT
GGTGAAATCTTTTTGGTCCTCCACCAGATTAACCGTGGATCGCCCATCCCTGATGATTTG
ATTGAGTTTAATCCCTATCAGTATGATCCTTCAAATTTGCCAGATGGAGCATGGTTCCTA
GTGAGAAAAACTGAGGAAAAATCGACGGAATATGGACTCTGGAGAGTGAAAGATTCAGCC
TGTGAAATTTTTGCAAATTCTGATATCAGTGGTTGGAGAACCACTTATGAATTTTTTCAA
GTCCAAGCCTCTATCGAGCAGAAAACTGTCTATATAATGCATGAGTATAAAGTAACACCG
AAAGGGCAGCGTGTTCTGACCAAGTCACAGGAGTCTTCAATTTGTAGATTTTTTGGTTTG
TGGAATGATGCAGAGCACGACGATGTACGTCACCTATTGAGCTATTTTAGCTTTATCCCA
TCAGTTAACCCAGACACTAGCGGTAACGATGGGCAACGTTCAATTGCTGAACCCCAGGTA
AACGGACAGATAGAAGGGGCTGGGTCATCACTCGTTGACAAATGGATAGATCAGTCTGAG
ATAGATTGCATTATGCGAGGGGACTACCTGGAATTGAATGACCTTATTGATGGAGCATCA
CATGATTCCTCTAGTTCAGAGAATACAAGTCGCCAGAGCTTCGTGTCTGATGATTTTTTC
AACTCTCGGGCACTTCTTGCGGAACTAGATGATGAGAAGAAGGAAGATTTGAGTGGAAAA
GGTTCACTTCTTGCGGAACTGAATGATGAGAAGAAGGAAGATTTGAGTGGAAAAGGTTCA
ACCAGCAATCATCATACCATAATGATGTGTCAAATAGCAAATGATGTAGTTGTGCAGCCT
GGACCTTTAGGGTTTGTATTTATAGGGAATGATGCTAAAGCCAAAGAAACTCAACAAACT
CCTGATAATCACAAATCGAAATCTCAAGATCAGGCTGTTAAGAAAATGAAGGTGGCTAAG
AAACTGAAGGATGAAGGTCCATCACATGCTCGTAGAGCCACGACATCATCCAGCAGCAGC
AACAGCAGCAGTGATGAACCTGGACGTGCAGCTCGAAGGGAGGAGAAACGTTCAAAGAAG
CTAATGAAGTTCCTGTGTTTTATGCCTTTCTAG

Peptide Sequence

PEP ID

Solyc04g079940.3.1
PEP Infomation

NAC domain-containing protein (AHRD V3.3 *** A0A060A1D2_BOENI)
Sequence

MRPLSPSASPPGLMSSCGTDGEIFLVLHQINRGSPIPDDLIEFNPYQYDPSNLPDGAWFL
VRKTEEKSTEYGLWRVKDSACEIFANSDISGWRTTYEFFQVQASIEQKTVYIMHEYKVTP
KGQRVLTKSQESSICRFFGLWNDAEHDDVRHLLSYFSFIPSVNPDTSGNDGQRSIAEPQV
NGQIEGAGSSLVDKWIDQSEIDCIMRGDYLELNDLIDGASHDSSSSENTSRQSFVSDDFF
NSRALLAELDDEKKEDLSGKGSLLAELNDEKKEDLSGKGSTSNHHTIMMCQIANDVVVQP
GPLGFVFIGNDAKAKETQQTPDNHKSKSQDQAVKKMKVAKKLKDEGPSHARRATTSSSSS
NSSSDEPGRAARREEKRSKKLMKFLCFMPF*

Transcript Sequence

Transcript ID

Solyc04g079940.3.1
Transcript Infomation

NAC domain-containing protein (AHRD V3.3 *** A0A060A1D2_BOENI)
Sequence

ATATGGTGCAAGCTAGGAGTAGTAGTAGAAAGTGTTTAACTGTGAGGAAGGACAATTAAC
TGACCATGGTCACACTAACAAATCCCACTACAGACCCCTCTATATAAAGCTTTCAAGCAA
AAAACACACAAATTATTTACAACTCAAATAGAAAGTATAGAGAGAGAAAGCCATCAAGAA
AGAAGTAGATCGGAACTTTCCAGCTTTGATCTATTTCATCATCTGTCTACCATGCGTCCT
CTGTCTCCGTCAGCTTCACCTCCAGGCTTGATGAGTTCCTGTGGGACTGATGGTGAAATC
TTTTTGGTCCTCCACCAGATTAACCGTGGATCGCCCATCCCTGATGATTTGATTGAGTTT
AATCCCTATCAGTATGATCCTTCAAATTTGCCAGATGGAGCATGGTTCCTAGTGAGAAAA
ACTGAGGAAAAATCGACGGAATATGGACTCTGGAGAGTGAAAGATTCAGCCTGTGAAATT
TTTGCAAATTCTGATATCAGTGGTTGGAGAACCACTTATGAATTTTTTCAAGTCCAAGCC
TCTATCGAGCAGAAAACTGTCTATATAATGCATGAGTATAAAGTAACACCGAAAGGGCAG
CGTGTTCTGACCAAGTCACAGGAGTCTTCAATTTGTAGATTTTTTGGTTTGTGGAATGAT
GCAGAGCACGACGATGTACGTCACCTATTGAGCTATTTTAGCTTTATCCCATCAGTTAAC
CCAGACACTAGCGGTAACGATGGGCAACGTTCAATTGCTGAACCCCAGGTAAACGGACAG
ATAGAAGGGGCTGGGTCATCACTCGTTGACAAATGGATAGATCAGTCTGAGATAGATTGC
ATTATGCGAGGGGACTACCTGGAATTGAATGACCTTATTGATGGAGCATCACATGATTCC
TCTAGTTCAGAGAATACAAGTCGCCAGAGCTTCGTGTCTGATGATTTTTTCAACTCTCGG
GCACTTCTTGCGGAACTAGATGATGAGAAGAAGGAAGATTTGAGTGGAAAAGGTTCACTT
CTTGCGGAACTGAATGATGAGAAGAAGGAAGATTTGAGTGGAAAAGGTTCAACCAGCAAT
CATCATACCATAATGATGTGTCAAATAGCAAATGATGTAGTTGTGCAGCCTGGACCTTTA
GGGTTTGTATTTATAGGGAATGATGCTAAAGCCAAAGAAACTCAACAAACTCCTGATAAT
CACAAATCGAAATCTCAAGATCAGGCTGTTAAGAAAATGAAGGTGGCTAAGAAACTGAAG
GATGAAGGTCCATCACATGCTCGTAGAGCCACGACATCATCCAGCAGCAGCAACAGCAGC
AGTGATGAACCTGGACGTGCAGCTCGAAGGGAGGAGAAACGTTCAAAGAAGCTAATGAAG
TTCCTGTGTTTTATGCCTTTCTAGTTTCTACATCCTTGTTGTTTCAACTCTTACTAGTAT
AGTTTTAACCCAAAAAAAAAAAAAAGAGGGGGGTTGGGGGGAGAATTTGTGCATTAGACT
AAATTTTAAACTTTATGATATTTAAGATTTAAAATAGGAAAGTAGTTCTCTTTAATACAG
ATGAAAAACTGTAGCATATTCATTTGTAATATAAAGAGACAAACGCTTTTGATAGCTCTT
GAAATGATAGCTTCTTTTCATTTACTTTTTT