Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc04g079780.3.1
CDS Infomation	RING/U-box superfamily protein (AHRD V3.3 *** AT2G16090.1)
Sequence	ATGGCGATTTCCGTGGCTTCTCTTGCTTCATCTTTTGCTTCCCTTTCATTTTCTTCTCAG ATTTCTCAAAAACCCTATGCTGTATCCCTTGCTCATTCGAAGCAATTCTCTTTCTCTCTC GCTTCCAAAATCTCTACGCTTGTAGTGTCAGCTTCTGTTGCTGAAGCACCGGAGACGGAG GAATTGGAAACCAGAGAGAATCTTTTGAAGCTTGTGAAAAGTAGACTTCCTGGAGGTTTC GCTGCACAGCCTATTTTTGGAACTGGTAGACGTAAAAGTGCTAGTGCTCGTGTTGTTCTT CAGGAAGGTTCTGGAAAAATCATCATCAACTATCGTGATGCTAAGGAATATCTTCAAGGA AATCCATTATGGATTCAATATGTCAAAACTCCACTGGCCACTTTAGGATATGAGGCTAGT TATGACATTTTTGTCAAGGTGGAAGGCGGTGGTCTTTCTGGGCAGGCTCAAGCAATTTCC CTTGGCATTGCTCGTGCACTCCTAAAGGTTAGCGAGAGCCATAGAAAACCATTGAGGGAG GAGGGTCTGTTAACTAGAGATGCCAGAGTTGTTGAGCGGAAGAAAGTTGGTCTCAAGAAG GCTCGCAAGCGTCCACAATTTTCCAAGCTCCAGGTTGGTACTTACTCACTGTGGCAGCAT TTGGTAGAAAGTGATGAAGACTACTATAATGGAGAATACGAGGATGATTATGATCGTGAC CCGGAACCCGAATCTGATGATGATTTATCTTGTGGCAAAGCTCCTTCATGCAGGGTAATA AAGAAAGAATCCCTTTTAGCAGCACAGAAAGAAGATCTACAGAGAGTAGTAGACTTGCTT TCTCTGAAAGAACATCATGCACGAACGTTGCTTATTCATTATCAATGGGATGTCGATAAG GTCTTTGCAATTTTTGTTGAAAGAGGGAAAGAAAGATTGTTTGTAGAAGCTGGTATAACA CTAGAGGAGAAAAATGAGAATCCTTCCTCCGACCCCTCAACCGAATATACATGTGAAATT TGCTTTGAGGATTTCCCTGATGAGCAAACGACGTTGATGGAATGCAATCATAGGTTTTGC AATGATTGTTGGACAGAGTATTTCGTAGTAAAGATAAATGATGGTAAGAGTAGACGTGTA ACATGCATGGCTCAGAAATGCAAAGCGATATGTGATGAAGGAAAGATTAGGGATTTAGTC ACTGCAAAGGATCCTAATTTGGCAGAGAAGTTTGATCGTTTTATCCTAGAATCATATATC GAGGATAATAAGAGGGTTAAATGGTGCCCTAGTGTTCCTCATTGTGGAAATGCAATTCGT GTTGAGGATGACGAGTACTGTGAGGTTGAATGTGCATGTGGTCAGCAATTCTGTTTTAAC TGCTTGTGCGAACTGCACTCACCTTGTTCGTGTGTTATGTGGGACCTTTGGCTTAAGAAG TGCGACGATGAAGCTCCCACTGTCAATTGGTTATCAGAGAAAACTAAGCATTGTCCAAAA TGTCATAAAATTGTGGAGAAGGATGGAGGATGCAACCTGGTACAGTGTATATGTGGACAG CCATTTTGTTGGCTCTGTGGTGAAGCTACTGGATTTGAACACACATGGAATAGTATAGCA GGTCACACTTGTGGCAGATACAAAGAAAATCATTTGAAAAGTGAGGAGGATTCTGTAGAG GACTATTGGCGTCTTACTCACTATTATAGTCGTTATAAGGCTCATATTGGTTCGTTGAAG ATTGAAGCATCTGAATCGAAGCAAAAAATACTTGATAAAGTCCATAGCCTTGAATCAAAG GAGTTCCAGTTAAAAGATTTCAGCTGGGCAATGAGTGGATTTTATAGACTCGCCTTATCA AGGCGAGTTCTCGCCTGTTCCTATCCATTTGCATACTACTATTTTGGAGCTCTGTTTGCA AATGAAATAACAAAAGAAGAACGCGAAATAAAACAGAACCTCTTTGAGGATCAACAGCAG CAACTTGAAACAAATATCGAAAGGCTTTCAATGTTCTTGGAAGAGCCATTTGGTAGCTAT GCTGAAGATAAGCTTGTTGAGACAAGAATGAAGATTATTACTCTCTCCACAGTAACTGAT GACCTCTGCAAAAACTTGTACGAGTGCATTGACAACGATTTGCTAGTTCCTTTACAACAA GCAACTCATACAATAGTTCGTTATAGATCCAATGGTGTGGAAAAAGCATCAGAACTATAG

Peptide Sequence

PEP ID	Solyc04g079780.3.1
PEP Infomation	RING/U-box superfamily protein (AHRD V3.3 *** AT2G16090.1)
Sequence	MAISVASLASSFASLSFSSQISQKPYAVSLAHSKQFSFSLASKISTLVVSASVAEAPETE ELETRENLLKLVKSRLPGGFAAQPIFGTGRRKSASARVVLQEGSGKIIINYRDAKEYLQG NPLWIQYVKTPLATLGYEASYDIFVKVEGGGLSGQAQAISLGIARALLKVSESHRKPLRE EGLLTRDARVVERKKVGLKKARKRPQFSKLQVGTYSLWQHLVESDEDYYNGEYEDDYDRD PEPESDDDLSCGKAPSCRVIKKESLLAAQKEDLQRVVDLLSLKEHHARTLLIHYQWDVDK VFAIFVERGKERLFVEAGITLEEKNENPSSDPSTEYTCEICFEDFPDEQTTLMECNHRFC NDCWTEYFVVKINDGKSRRVTCMAQKCKAICDEGKIRDLVTAKDPNLAEKFDRFILESYI EDNKRVKWCPSVPHCGNAIRVEDDEYCEVECACGQQFCFNCLCELHSPCSCVMWDLWLKK CDDEAPTVNWLSEKTKHCPKCHKIVEKDGGCNLVQCICGQPFCWLCGEATGFEHTWNSIA GHTCGRYKENHLKSEEDSVEDYWRLTHYYSRYKAHIGSLKIEASESKQKILDKVHSLESK EFQLKDFSWAMSGFYRLALSRRVLACSYPFAYYYFGALFANEITKEEREIKQNLFEDQQQ QLETNIERLSMFLEEPFGSYAEDKLVETRMKIITLSTVTDDLCKNLYECIDNDLLVPLQQ ATHTIVRYRSNGVEKASEL*

Transcript Sequence

Transcript ID	Solyc04g079780.3.1
Transcript Infomation	RING/U-box superfamily protein (AHRD V3.3 *** AT2G16090.1)
Sequence	TTATCTATTACTCAATCTTCGAAAGAAGATAGATAGATAGAGAGTCGAAAATGGCGATTT CCGTGGCTTCTCTTGCTTCATCTTTTGCTTCCCTTTCATTTTCTTCTCAGATTTCTCAAA AACCCTATGCTGTATCCCTTGCTCATTCGAAGCAATTCTCTTTCTCTCTCGCTTCCAAAA TCTCTACGCTTGTAGTGTCAGCTTCTGTTGCTGAAGCACCGGAGACGGAGGAATTGGAAA CCAGAGAGAATCTTTTGAAGCTTGTGAAAAGTAGACTTCCTGGAGGTTTCGCTGCACAGC CTATTTTTGGAACTGGTAGACGTAAAAGTGCTAGTGCTCGTGTTGTTCTTCAGGAAGGTT CTGGAAAAATCATCATCAACTATCGTGATGCTAAGGAATATCTTCAAGGAAATCCATTAT GGATTCAATATGTCAAAACTCCACTGGCCACTTTAGGATATGAGGCTAGTTATGACATTT TTGTCAAGGTGGAAGGCGGTGGTCTTTCTGGGCAGGCTCAAGCAATTTCCCTTGGCATTG CTCGTGCACTCCTAAAGGTTAGCGAGAGCCATAGAAAACCATTGAGGGAGGAGGGTCTGT TAACTAGAGATGCCAGAGTTGTTGAGCGGAAGAAAGTTGGTCTCAAGAAGGCTCGCAAGC GTCCACAATTTTCCAAGCTCCAGGTTGGTACTTACTCACTGTGGCAGCATTTGGTAGAAA GTGATGAAGACTACTATAATGGAGAATACGAGGATGATTATGATCGTGACCCGGAACCCG AATCTGATGATGATTTATCTTGTGGCAAAGCTCCTTCATGCAGGGTAATAAAGAAAGAAT CCCTTTTAGCAGCACAGAAAGAAGATCTACAGAGAGTAGTAGACTTGCTTTCTCTGAAAG AACATCATGCACGAACGTTGCTTATTCATTATCAATGGGATGTCGATAAGGTCTTTGCAA TTTTTGTTGAAAGAGGGAAAGAAAGATTGTTTGTAGAAGCTGGTATAACACTAGAGGAGA AAAATGAGAATCCTTCCTCCGACCCCTCAACCGAATATACATGTGAAATTTGCTTTGAGG ATTTCCCTGATGAGCAAACGACGTTGATGGAATGCAATCATAGGTTTTGCAATGATTGTT GGACAGAGTATTTCGTAGTAAAGATAAATGATGGTAAGAGTAGACGTGTAACATGCATGG CTCAGAAATGCAAAGCGATATGTGATGAAGGAAAGATTAGGGATTTAGTCACTGCAAAGG ATCCTAATTTGGCAGAGAAGTTTGATCGTTTTATCCTAGAATCATATATCGAGGATAATA AGAGGGTTAAATGGTGCCCTAGTGTTCCTCATTGTGGAAATGCAATTCGTGTTGAGGATG ACGAGTACTGTGAGGTTGAATGTGCATGTGGTCAGCAATTCTGTTTTAACTGCTTGTGCG AACTGCACTCACCTTGTTCGTGTGTTATGTGGGACCTTTGGCTTAAGAAGTGCGACGATG AAGCTCCCACTGTCAATTGGTTATCAGAGAAAACTAAGCATTGTCCAAAATGTCATAAAA TTGTGGAGAAGGATGGAGGATGCAACCTGGTACAGTGTATATGTGGACAGCCATTTTGTT GGCTCTGTGGTGAAGCTACTGGATTTGAACACACATGGAATAGTATAGCAGGTCACACTT GTGGCAGATACAAAGAAAATCATTTGAAAAGTGAGGAGGATTCTGTAGAGGACTATTGGC GTCTTACTCACTATTATAGTCGTTATAAGGCTCATATTGGTTCGTTGAAGATTGAAGCAT CTGAATCGAAGCAAAAAATACTTGATAAAGTCCATAGCCTTGAATCAAAGGAGTTCCAGT TAAAAGATTTCAGCTGGGCAATGAGTGGATTTTATAGACTCGCCTTATCAAGGCGAGTTC TCGCCTGTTCCTATCCATTTGCATACTACTATTTTGGAGCTCTGTTTGCAAATGAAATAA CAAAAGAAGAACGCGAAATAAAACAGAACCTCTTTGAGGATCAACAGCAGCAACTTGAAA CAAATATCGAAAGGCTTTCAATGTTCTTGGAAGAGCCATTTGGTAGCTATGCTGAAGATA AGCTTGTTGAGACAAGAATGAAGATTATTACTCTCTCCACAGTAACTGATGACCTCTGCA AAAACTTGTACGAGTGCATTGACAACGATTTGCTAGTTCCTTTACAACAAGCAACTCATA CAATAGTTCGTTATAGATCCAATGGTGTGGAAAAAGCATCAGAACTATAG