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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g079600.3.1
CDS Infomation

Homeodomain-like superfamily protein (AHRD V3.3 *** AT5G42630.1)
Sequence

ATGACGAAGGATACACTACTTTCAACGGTCCCTGATCTTTCTTTACAGATCAGCTTACCG
TCATGTATTTTAAGAAGTGATCAGTTTAAAGAAGCGGTGAGATTCGATTTCAGGACAGAT
TCAGGTAGTAGTGCTAGTGGAGGAAGTGATTTGAGCCATGAAAATACCGTTTTTTTACAT
CCTGAGATTAAAAAAGCGTTCAATCTTCCTTTAATTCCGACTTTTGAACCAACCCTAAGT
TTAGGGTTCGCACAAGTACCATTAGGTACACATTTTCAATATCATCATGAGCATTATCAG
CCACAAATATACGGGCGCGAGTTCAAGAGAAGTTCAAGATTGATTAGTGGAGTAAAAAGA
AGCGTTAGAGCTCCAAGAATGAGATGGACTTCAACTCTTCATGCTCATTTTGTTCATGCC
GTTCAACTCCTAGGTGGACACGAACGAGCAACACCAAAATCCGTGCTAGAGTTAATGAAT
GTGAAAGATCTAACCTTAGCTCATGTGAAGAGTCACTTACAGATGTATAGAACAGTGAAG
AGCACTGACAAATCAACAGCTAAAGGGCAGGGAGAAATTAATATATTTTTGAACCAAAAC
AATGGGATTAATAATGGTGAATATGAAAAATCTTGTGAGGAGATTGATGCATTATCACAA
CCAAGTACCATATCACAAAATATGGCTCATATGAGGGATCCTTCATCATTCATGCCTGAT
CAGACAAATGTATGGAGCCACTCAAATAGAGAAAGGACATTTGCTAATTATCCTCACATA
TACACAAATATGGATGGAATTGAGACAGCCAATAACTCATCTTCAAATGATACAATGCTT
GATCTTGAATTTACACTAGGAAGACCAAGCTGGAAAATGGGACAAGCTGGATCATCCTCA
AATGATTTGACTCTTCTCAAGTGTTAA

Peptide Sequence

PEP ID

Solyc04g079600.3.1
PEP Infomation

Homeodomain-like superfamily protein (AHRD V3.3 *** AT5G42630.1)
Sequence

MTKDTLLSTVPDLSLQISLPSCILRSDQFKEAVRFDFRTDSGSSASGGSDLSHENTVFLH
PEIKKAFNLPLIPTFEPTLSLGFAQVPLGTHFQYHHEHYQPQIYGREFKRSSRLISGVKR
SVRAPRMRWTSTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVK
STDKSTAKGQGEINIFLNQNNGINNGEYEKSCEEIDALSQPSTISQNMAHMRDPSSFMPD
QTNVWSHSNRERTFANYPHIYTNMDGIETANNSSSNDTMLDLEFTLGRPSWKMGQAGSSS
NDLTLLKC*

Transcript Sequence

Transcript ID

Solyc04g079600.3.1
Transcript Infomation

Homeodomain-like superfamily protein (AHRD V3.3 *** AT5G42630.1)
Sequence

TTATACGTGTTAAGATTTTCATATAACTCAATCGTAAAATATTCAACTTAGTTAAAATTA
CTTATCATGTATAAGAAAAAATTCTCTTTGATCAGAATGATTAACTTAAATATCGAAAAT
TGAAAAAAAAAATGAGTTTATTGTAAAATTTGAGTATGTTGGGCCTTGGCCCCCCACCAC
TTAATTCTTTGTTCCCAAAGTCCAAACAAACATTTACTCACACATATACGAAATTAATTG
AAGGTGTAATATTGATCCTTTCTTTCTCTATTCTTAACTACAATTCCTTCCCTTTAATTT
ATTCAGATTCAAACTCCCAAGAAAAACCTCTTAGCTTTATATTGACTAGAGATTACAAAT
AGTCTCTATACTATTCTTCTTCACATTTCTACTTTTATCTTCTTATCCCTGTAACTCCCT
ATATATTATACCCTTTTTTCTTTAACAAAAAGCCTATTTCTGAACCCTCCCTTTTTTATA
CACATGAATACATGCAAATCATAAGGTACTTATGATATAATCACAACACACAACAAACCT
TTTAACCTTTGATTCAATTTTCTCTCTTTTCAAGAAAATTAAAAACTTCCCTTTTTTTTT
TCAGTTCAAAAAAATCGTTATGACGAAGGATACACTACTTTCAACGGTCCCTGATCTTTC
TTTACAGATCAGCTTACCGTCATGTATTTTAAGAAGTGATCAGTTTAAAGAAGCGGTGAG
ATTCGATTTCAGGACAGATTCAGGTAGTAGTGCTAGTGGAGGAAGTGATTTGAGCCATGA
AAATACCGTTTTTTTACATCCTGAGATTAAAAAAGCGTTCAATCTTCCTTTAATTCCGAC
TTTTGAACCAACCCTAAGTTTAGGGTTCGCACAAGTACCATTAGGTACACATTTTCAATA
TCATCATGAGCATTATCAGCCACAAATATACGGGCGCGAGTTCAAGAGAAGTTCAAGATT
GATTAGTGGAGTAAAAAGAAGCGTTAGAGCTCCAAGAATGAGATGGACTTCAACTCTTCA
TGCTCATTTTGTTCATGCCGTTCAACTCCTAGGTGGACACGAACGAGCAACACCAAAATC
CGTGCTAGAGTTAATGAATGTGAAAGATCTAACCTTAGCTCATGTGAAGAGTCACTTACA
GATGTATAGAACAGTGAAGAGCACTGACAAATCAACAGCTAAAGGGCAGGGAGAAATTAA
TATATTTTTGAACCAAAACAATGGGATTAATAATGGTGAATATGAAAAATCTTGTGAGGA
GATTGATGCATTATCACAACCAAGTACCATATCACAAAATATGGCTCATATGAGGGATCC
TTCATCATTCATGCCTGATCAGACAAATGTATGGAGCCACTCAAATAGAGAAAGGACATT
TGCTAATTATCCTCACATATACACAAATATGGATGGAATTGAGACAGCCAATAACTCATC
TTCAAATGATACAATGCTTGATCTTGAATTTACACTAGGAAGACCAAGCTGGAAAATGGG
ACAAGCTGGATCATCCTCAAATGATTTGACTCTTCTCAAGTGTTAAATAATTTGATTTAT
GTAGAGTAATTATAATTAATTAAGTTAACCTAGTTATTAGTTATAGTTTTTTTTTTTATT
ATTTATGTACGTGACTGCAGGAATATGGTTCAATTTTGTCTTGACCAAAAAAGGTTAAAG
CTTACTATCGATGAAAGCACCAATATGACAAACCTGAATTGCTCACTATATTGATAAGAG
AATTGAAATGCGATTGCAACTTTAGAATTGTAATTGCAATACCCCTACTACTGAATTACA
ATGGAAGCATGAAAATAACAAGTAACTAACGATAGAGATAAGAACAAAAATGATAAACTT
AGACTCTAGAAGAAGAAGAGGACCGACAACTTTTTTCAATATAAATAAGCCCTTCTTTCA
AACTTTTTCTCTCTTTTAACCAAATGCTAATTGGGTGTGGATCCC