Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc04g079390.3.1
CDS Infomation	Gamma-tubulin complex component (AHRD V3.3 *** K4BV23_SOLLC)
Sequence	ATGGAAGCTCCCCAGAGTTTAGTCGGAAAATTATACACTTCATATTCCGACGGGTTACAC TTTGCGAAGCCAATTTCAACCTTACGAACTAACGAATTTGATTTAGTGCGAAATGTGCTG CAAATATTACAAGGGTTTTCGAGTACAATGTTGTATTGGGATGAATTAGGGCATCATTTT CGTGTTCGGAGTGGGATATATGTTAGTCATCTTTCGCATACTAGTCTATATCATGTTCTC AATCAGTTTACCTATGCGGCAACATGTTTAAAGATGGTAGAAAGTAGAATTCAGGAGGTT GAGAAATCTGTGCCTCCTCCACCACCTACTTTGAGGGCATTTTGTTGCTCTATCTACTCT TGGCTAACATGGTTGCGAAATGGTGCGTTGAAAGAGGAGATGAAGGTGGTCGACTCATGT AGTTTAACTACTCCAACCCTCTTGGGATTGTCAAGTTCTTTATCAAGTTTGTGTGCAGGA GCCGAGTTTTTGTTTCAAGTAGTGCAAGAAGCCATTCCACAAGCTTATGATGAAACTGAT TCGCCTATCTCTGCCACAGCTATTGCTGTGCATACTCTTAATTATTTACATAAGAAGCTG ACTGAAGTTTGTCTTGTGCAAGGTGGCGAGGAGGATGCTTACAGGATGATATTACATGCA TTTGTTAGCACTCTTTTGCCATACATTGAGGGCCTTGATTCATGGCTTTATGAAGGAATT CTGGACGACCCCTTTGAGGAGATGTTCTTTCATGCTAACAAACGAATTGCAGTTGTGGAG TCTGAGTTTTGGGAGAAGAGCTATCTGCTGAGATCTGCAAAAATGGATACTGGTCGTGTC ACTGATTCTTTGCTTTCAATAAAACGGACAGACGACGTGAGTAGAAAAGAGCCTAATGAT GTGTCTGGTTTGGCCAAAGAAAAAGGGGCAAATGGGAGAGATTTAGATGTGTGTCCTCTG TTTATGAAAGAGATAGCCAGGGATATTATCTCTGCTGGAAAGTCATTGCAGCTTGTACAA CATACTCGTATGACATCCTCAGTATCTGCCAGTGGCCGTATTGCTGGGTTAAGCTTGTCA GAGATCTTTTGTGTCACCTTATCAGCTCTTATTGGCTATGGAGATCACGTATCTGAATAC TTTTTGAAGGAGAAGAAAATTGTTCCATTAGTTAAATCATTTACTGGAAGGCAAAAAGAA GAAAGAAGTAACAAGAGCTTCCAAGAGATGACATGCTCAGATAAAGAATGGTGTAAGTTC TTGGTTGATACCATGGTTCAGAAAGGAAAAGCTAATCTCATATCATGTAATGCTCTTGGA GAGGAAGTGGATAGCTTTGTTGTAGAAGGAGATAAGCTAGCTTTAGATAGAAATGATATT CTATCCTTAGGATTCCGTCCTGAAAATCCAGCTATAACTACTAGCCAAAATTTTCTTCAT GCAAATAGGGATGCTTGGGGTCCATTGAATTTATCTAGAGAGTTTTACCTTCCCCCTCTT AATGATGAAGGATTAAGGCAGGCAATATTCAATGGAAGTGCTGGATCATTTGTGGCAACC AAAAGTACAAACTATACCTTCGGTTTTCAGTTTGGTGAATCTGAACGTGATCGATTAAAA GAAGATGTCACTTTTCTGGAGGAGTTGTTCCCCTTTCCAACTCTTCTTCCTCCTTTTCAG GAGGATGATCATGTGTCGGAGGTGTTTCCTTTTCAGGAAAATAGCACACTCGCTTCAAGG ACCTTAAACTGGATTGGGAGGGTTGAACCAAGGAATACTCCGTTGCCTACGGTTATTCTT CAAGAATGCCTTATTGTCTTCATAAAGAAACAGGCTGATTGTATTGGCAGGAATATTTTG TCAAAATTACTGTCTGAGTGGAGACTGCTAGAAGAGCTGGAAGTGCTGCGTGCTATATAC TTGTTAGGCTCAGGTGATCTACTGCAGCACTTCTTGACAGTGGTCTTCAATAAACTAGAC AAAGGAGAAAGCTTGGATGATGATTTTGAATTAAATACAACACTGCAGGAATCAATCCGA TACTCTGCTGATGCCGCACTATTAAGCACGCCCGATTCATTAGTTGTATCTGTAACAAGA AATAATGCCACTATTGAGGATGACCAGCGTGGTATGCCTCTTCTAACTTCGATACCTCGC AAGAGTCGAGGGCAAAACTTTGGCATTGATGGTCTTGATTCACTCATGTTTACGTACAAG GTTCCTTGGCCCCTTGAGCTTATTGCTAATACAGAAGCAATAAAGAAGTATAATCAGGTT ATGAGGTTCTTACTGAAGGTCAGGCGTGCAAAATTTGTTCTTGATAAAGCTCGGAGGTGG ATGTGGAAGGACAGAAGTTCAGCATCTATTAACCGCAAACATCATTGGTTACTGGAACAA AAACTGCTACATTTTGTGGATGCCTTCCACCACTATGTGATGGACAGGGTGTATCACAGT GCATGGGGTGAACTCTGTGAAGGTTTGGCTGCAGCAAGATCATTGGATGAAGTCATCGAA ATACACGAGGCTTACTTGATGTCAATCCAAAGGCACTGCTTTGCTGTTCCAGAAAAACTG TGGGCATTGATTGCTAGCCGTATCAACAGTATTCTTGGATTAGCTCTCGATTTCTATTCA GTACAGCAGACTCTTAGCAGTGGAGGAGCTGTTTCTGCAATCAAGGCAAGGTGTGAAATG GAAATCAATAGGATTGAGAAACAGTTTGATGACTGCATAGCTTTCCTCATGAGGATTCTA TCTTTCAAGCTCAACGTGGGACAGTTTCCACATTTGGCAGATCTGGTTACCAGAATCAAT TACAACCATTTCTATATGTCACACAATGGAAGTTTGATAAATGCACCTGGCTCTAATACT GTTCCTTCCAAATCAGGGAAGTTGTTTGCAGGCCAAAGAGATTGA

Peptide Sequence

PEP ID	Solyc04g079390.3.1
PEP Infomation	Gamma-tubulin complex component (AHRD V3.3 *** K4BV23_SOLLC)
Sequence	MEAPQSLVGKLYTSYSDGLHFAKPISTLRTNEFDLVRNVLQILQGFSSTMLYWDELGHHF RVRSGIYVSHLSHTSLYHVLNQFTYAATCLKMVESRIQEVEKSVPPPPPTLRAFCCSIYS WLTWLRNGALKEEMKVVDSCSLTTPTLLGLSSSLSSLCAGAEFLFQVVQEAIPQAYDETD SPISATAIAVHTLNYLHKKLTEVCLVQGGEEDAYRMILHAFVSTLLPYIEGLDSWLYEGI LDDPFEEMFFHANKRIAVVESEFWEKSYLLRSAKMDTGRVTDSLLSIKRTDDVSRKEPND VSGLAKEKGANGRDLDVCPLFMKEIARDIISAGKSLQLVQHTRMTSSVSASGRIAGLSLS EIFCVTLSALIGYGDHVSEYFLKEKKIVPLVKSFTGRQKEERSNKSFQEMTCSDKEWCKF LVDTMVQKGKANLISCNALGEEVDSFVVEGDKLALDRNDILSLGFRPENPAITTSQNFLH ANRDAWGPLNLSREFYLPPLNDEGLRQAIFNGSAGSFVATKSTNYTFGFQFGESERDRLK EDVTFLEELFPFPTLLPPFQEDDHVSEVFPFQENSTLASRTLNWIGRVEPRNTPLPTVIL QECLIVFIKKQADCIGRNILSKLLSEWRLLEELEVLRAIYLLGSGDLLQHFLTVVFNKLD KGESLDDDFELNTTLQESIRYSADAALLSTPDSLVVSVTRNNATIEDDQRGMPLLTSIPR KSRGQNFGIDGLDSLMFTYKVPWPLELIANTEAIKKYNQVMRFLLKVRRAKFVLDKARRW MWKDRSSASINRKHHWLLEQKLLHFVDAFHHYVMDRVYHSAWGELCEGLAAARSLDEVIE IHEAYLMSIQRHCFAVPEKLWALIASRINSILGLALDFYSVQQTLSSGGAVSAIKARCEM EINRIEKQFDDCIAFLMRILSFKLNVGQFPHLADLVTRINYNHFYMSHNGSLINAPGSNT VPSKSGKLFAGQRD*

Transcript Sequence

Transcript ID	Solyc04g079390.3.1
Transcript Infomation	Gamma-tubulin complex component (AHRD V3.3 *** K4BV23_SOLLC)
Sequence	GGTACCGCACTCGATTATAAGAGGGGAAAAAAACAACTAAAATTTTGGAAAATCGAGACA CTTTGCCCCTTCTATTCCCCTCTTTTTCATTTTACCCTTTGTTTTGAATCAGAAAGCGGG ACAGAATTTCCCTGTAGAATTATGGAAGCAATTTGTAACTTCAGACTGAAATGGATCCAT GAAAACATTCACAAATTGTAGTGTTATCAACTGTAGACAACAGAAAAATGGAAGCTCCCC AGAGTTTAGTCGGAAAATTATACACTTCATATTCCGACGGGTTACACTTTGCGAAGCCAA TTTCAACCTTACGAACTAACGAATTTGATTTAGTGCGAAATGTGCTGCAAATATTACAAG GGTTTTCGAGTACAATGTTGTATTGGGATGAATTAGGGCATCATTTTCGTGTTCGGAGTG GGATATATGTTAGTCATCTTTCGCATACTAGTCTATATCATGTTCTCAATCAGTTTACCT ATGCGGCAACATGTTTAAAGATGGTAGAAAGTAGAATTCAGGAGGTTGAGAAATCTGTGC CTCCTCCACCACCTACTTTGAGGGCATTTTGTTGCTCTATCTACTCTTGGCTAACATGGT TGCGAAATGGTGCGTTGAAAGAGGAGATGAAGGTGGTCGACTCATGTAGTTTAACTACTC CAACCCTCTTGGGATTGTCAAGTTCTTTATCAAGTTTGTGTGCAGGAGCCGAGTTTTTGT TTCAAGTAGTGCAAGAAGCCATTCCACAAGCTTATGATGAAACTGATTCGCCTATCTCTG CCACAGCTATTGCTGTGCATACTCTTAATTATTTACATAAGAAGCTGACTGAAGTTTGTC TTGTGCAAGGTGGCGAGGAGGATGCTTACAGGATGATATTACATGCATTTGTTAGCACTC TTTTGCCATACATTGAGGGCCTTGATTCATGGCTTTATGAAGGAATTCTGGACGACCCCT TTGAGGAGATGTTCTTTCATGCTAACAAACGAATTGCAGTTGTGGAGTCTGAGTTTTGGG AGAAGAGCTATCTGCTGAGATCTGCAAAAATGGATACTGGTCGTGTCACTGATTCTTTGC TTTCAATAAAACGGACAGACGACGTGAGTAGAAAAGAGCCTAATGATGTGTCTGGTTTGG CCAAAGAAAAAGGGGCAAATGGGAGAGATTTAGATGTGTGTCCTCTGTTTATGAAAGAGA TAGCCAGGGATATTATCTCTGCTGGAAAGTCATTGCAGCTTGTACAACATACTCGTATGA CATCCTCAGTATCTGCCAGTGGCCGTATTGCTGGGTTAAGCTTGTCAGAGATCTTTTGTG TCACCTTATCAGCTCTTATTGGCTATGGAGATCACGTATCTGAATACTTTTTGAAGGAGA AGAAAATTGTTCCATTAGTTAAATCATTTACTGGAAGGCAAAAAGAAGAAAGAAGTAACA AGAGCTTCCAAGAGATGACATGCTCAGATAAAGAATGGTGTAAGTTCTTGGTTGATACCA TGGTTCAGAAAGGAAAAGCTAATCTCATATCATGTAATGCTCTTGGAGAGGAAGTGGATA GCTTTGTTGTAGAAGGAGATAAGCTAGCTTTAGATAGAAATGATATTCTATCCTTAGGAT TCCGTCCTGAAAATCCAGCTATAACTACTAGCCAAAATTTTCTTCATGCAAATAGGGATG CTTGGGGTCCATTGAATTTATCTAGAGAGTTTTACCTTCCCCCTCTTAATGATGAAGGAT TAAGGCAGGCAATATTCAATGGAAGTGCTGGATCATTTGTGGCAACCAAAAGTACAAACT ATACCTTCGGTTTTCAGTTTGGTGAATCTGAACGTGATCGATTAAAAGAAGATGTCACTT TTCTGGAGGAGTTGTTCCCCTTTCCAACTCTTCTTCCTCCTTTTCAGGAGGATGATCATG TGTCGGAGGTGTTTCCTTTTCAGGAAAATAGCACACTCGCTTCAAGGACCTTAAACTGGA TTGGGAGGGTTGAACCAAGGAATACTCCGTTGCCTACGGTTATTCTTCAAGAATGCCTTA TTGTCTTCATAAAGAAACAGGCTGATTGTATTGGCAGGAATATTTTGTCAAAATTACTGT CTGAGTGGAGACTGCTAGAAGAGCTGGAAGTGCTGCGTGCTATATACTTGTTAGGCTCAG GTGATCTACTGCAGCACTTCTTGACAGTGGTCTTCAATAAACTAGACAAAGGAGAAAGCT TGGATGATGATTTTGAATTAAATACAACACTGCAGGAATCAATCCGATACTCTGCTGATG CCGCACTATTAAGCACGCCCGATTCATTAGTTGTATCTGTAACAAGAAATAATGCCACTA TTGAGGATGACCAGCGTGGTATGCCTCTTCTAACTTCGATACCTCGCAAGAGTCGAGGGC AAAACTTTGGCATTGATGGTCTTGATTCACTCATGTTTACGTACAAGGTTCCTTGGCCCC TTGAGCTTATTGCTAATACAGAAGCAATAAAGAAGTATAATCAGGTTATGAGGTTCTTAC TGAAGGTCAGGCGTGCAAAATTTGTTCTTGATAAAGCTCGGAGGTGGATGTGGAAGGACA GAAGTTCAGCATCTATTAACCGCAAACATCATTGGTTACTGGAACAAAAACTGCTACATT TTGTGGATGCCTTCCACCACTATGTGATGGACAGGGTGTATCACAGTGCATGGGGTGAAC TCTGTGAAGGTTTGGCTGCAGCAAGATCATTGGATGAAGTCATCGAAATACACGAGGCTT ACTTGATGTCAATCCAAAGGCACTGCTTTGCTGTTCCAGAAAAACTGTGGGCATTGATTG CTAGCCGTATCAACAGTATTCTTGGATTAGCTCTCGATTTCTATTCAGTACAGCAGACTC TTAGCAGTGGAGGAGCTGTTTCTGCAATCAAGGCAAGGTGTGAAATGGAAATCAATAGGA TTGAGAAACAGTTTGATGACTGCATAGCTTTCCTCATGAGGATTCTATCTTTCAAGCTCA ACGTGGGACAGTTTCCACATTTGGCAGATCTGGTTACCAGAATCAATTACAACCATTTCT ATATGTCACACAATGGAAGTTTGATAAATGCACCTGGCTCTAATACTGTTCCTTCCAAAT CAGGGAAGTTGTTTGCAGGCCAAAGAGATTGAAAGATACTTGAAGGGATAGTGTTTTCGT TTTTTTCTTTTTTTCGATGTACAGCATTTACAGTAAAGAACCTCTTCCTGCATTTACCAG TTGAGAGAATATTCTACTGGTTGGGAAGAAGAGCCTATAATCTGTATTTCGTTATCTTAA GAGCCATCAAGCAATTGCATTTGGCTGTTGTGAGTGCATCTAATATCTGTTGTAGGCTTG TAGCTTTATATAAGAAATCCACAAGGCCAATGTTTGTAAGTTCAAAACTCGATGGATAAT GAACATATGCAGGTGACATCTCATTTTTAAACAAGTATAGCATGCAGCATAAAGAATAGT TGTGATAACTGATTAGACAGATTGCAAGATGCATGCATATATCTGATAAGCAATTAGTTC AAACTTCAAAGCTGGAAATAGAGTACAGGTCTGCTCATAAATCAAAAGTTCCAAGACAGT GAAAAGCTTTAGCAAGGTTCTACCAAGCAGATTAAGAACATCAAGAAATCTTGAAGCAAA GATGGAGATAAATATATTGGCATAGCCAAACTCCGGATGAGGGACGAGATAGAGATTGTA ACATGATGATTTATTTGAAAAAGCTGGCAACAACTCCTGAAATAGAAAACCTTGTCCCAC TGTAATCTACTAGGCTTTAGTATATGATATCCAGTAGTAATACTCCTAAATCTTGAAAAG AAGAAATCCTGCAGTAAGAAAAAACGACGTCATGTTATAAAAAAAAATGATCAACCTGGT TAAGATAGAATTTGTTTAGGCAAACAATGAACTTTGTTCAAAAAAAGTTTTCTTTAGAAG AAGTAGCACCATATTTCAAAGAAAAACAGGTAGCAGAAAAGCAAGGGCCAATTACAAGAA ACAACTACTACTACGAAGGGAGGAATATGGTTTCACATCTGATGAAAATGAAACAACTAA TCTCATGGCATATCATATATGGTTTCATCATCTTTAGATGTACTAAAAGTAGCGTCATTT CCAAACTAGGGTCAGCAATTACAAGAGGAGACAACTACTACTACACTTCAATTCCAAGCA AGTAGGGTAGGCGATTACAAGAGGAAGGCAAACTAAAAAGGACAGTATAGAAAGACACAG GAGGCTTGCAGTTACCACGATCATAAGCACTATGCTAGTATGTAAGCCCCTATAGAGATA AGGGTGAGCCAGGAGCATATTTATGCCTCTTGTGACATTGACATTTCCCATTAAAACCAT ACTGCTGTGAATAGTTCAAACAACCATGGACAGTTTCAAACTTCTTTTAAAATTCAAAAC ACCCCCATCATAAAACTAAGGTATTCCTAAATATTTGCAATCTCATTGAGTATCTATAAA TAAAATCATCACTTAGGCTCTCAATGGTTTCTATTATAAATCTTAAGAACGAATGCATGT TTCTCATGGTAATAAATTACTAAATAAAGAAGTAACAACAGAAGGCTTAATCTGTATTCT ATATGCATTTCCATTTTTGTATCAGTTTCATTTCATTCTGACAGAAAGAACATAACATTT CATGTAATGCAGTAAATACTAAAAAGTTCACTACAATCTCCGAGGTTTAATGATCATATA TCTACTACACATGGAAAAACTAGTTCTGTTTCAATACTCTTGCACATTGAAGGAAAAAAA ATCTGTCTGGTCTAGAAATTCATCATATCTCATTATAAAAGAGGATTTCAACACAATGAC CAATTTTACTCATATCCTGCTAACATGCAACGGAACGAGTCATACAATACATTACAGTCT CAAAGTACAACCAAATTTCGAAGCTGCACATTTTGGTTGCAGCATTTTCATCGAATTTAT ACACCTAAAGCAATTGTCTTATTCCCTCATTCATCGCGGAAGGTCTACTTTTGGATATTA AACTTTGTACTGTAGTCTGTAGATACATAAGGTTTAAGCTCAGCCTCCAGACGGCAGTAT ATCTATCAGGCTCAGCTGCTTCAATTTCTTTCTCTATATACACATTCCCATTACAGATTA ACAAACCTACTCTTTCTAGAGTTTTCCTCAGCCTAGACATTTCAACAAACACCTTTTGCT CAAACACAAACACTGGCTTAATCACACAACTAAGAAGCAGAATTCAAATTCAAACAAGCT TTTTTGCACAAAATTAAACCCAAACACAATCAAAGCGTAAACAAAATTTACCTGGGTATT GTATTGTCTACCAAGAAGCTTTCTTTACACCTTGCAAAGCACCACGAGCAGCCAAACCAC GAAAAACAATACGAGACATTCGAAACTTTTCATAAACGGCACGAGGTCGACCAGTAAAAA TGCACCGATTTCTGATTCGCGTAAAGGAACTGTTTCTGGGCAACTTGGCAAGCTTGTACT GATGAGCTTCTCGCATTTCAGGTGGAAGTTGAGGATCTTGAACAAAAGCTTTATACAACT TTCGCCTCAATTCATACTTAGCAGACAACAATCTGCGTTTGTTATCTTGAATATTTCTCG TGAATTTCTTCCCCAAAGCCACCATTGAATTCATCTTCGCTCTCTCAGACGATCGATTCG CTATACAATTCCCAAGATTTCAGTTTTTTTCCGATCAATGGGTAATACACTATTAGGGCT TCACCGGCAGGCCTTTTTCAGCTTTAGGCCCAGAAGAAAAAATGTTAACAGGCCCAATAG GCTTAAGGTGGAGAAAAGAAGAATTAGGCCCAATATTTTTACAAAGACCAAAAAT