Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g078930.3.1
CDS Infomation

Alpha-amylase (AHRD V3.3 *** K4BUX7_SOLLC)
Sequence

ATGCCAGGAAGGTTGTATGACTTGGATGCTTCCAAGTTTGGAAATCAGCAACAACTGAAA
ACTCTTATTAAGGCTTTACATGACCACGGGATCAAATCGGTTGCTGATATAGTGATAAAT
CATAGAACTGCTGATAACAAAGATAGCAGGGGAATATACAGCATCTTTGAAGGAGGAACA
TCTGATGACCGGCTTGATTGGGGTCCATCTTTCATTTGCAAGAACGACACACAATATTCT
GATGGCACGGGGAATCCAGACACGGGTTTGGACTTTGAACCTGCACCTGATATCGATCAT
CTTAATACGAGAGTGCAGAAAGAGTTATCAGACTGGATGAACTGGCTGAAATCTGAAATT
GGATTTGATGGTTGGCGTTTCGATTTTGTTAGGGGATATGCACCTTGCATTACCAAAATT
TATATGGGAAACACGTCCCCGGATTTTGCTGTTGGTGAATTGTGGAACTCTCTTGCTTAT
GGCCAGGACGGGAAACCGGAATATAACCAGGACAATCATAGAAATGAGCTAGTTGGTTGG
GTAAAAAATGCGGGGCGGGCTGTAACAGCTTTTGATTTTACAACAAAGGGAATTCTTCAA
GCTGCAGTTCAAGAAGAGTTATGGAGATTGAAGGATCCCAATGGAAAACCTCCTGGGATG
ATCGGTGTTTTGCCTCGAAAAGCTGTGACTTTTATCGATAATCATGATACTGGATCGACA
CAAAATATGTGGCCTTTCCCTTCAGACAAAGTTATGCAAGGATATGCATACATTCTTACT
CATCCAGGAATCCCATCCGTGTTTTATGACCATTTCTTTGATTGGGGCTTCAAGGATGGA
ATTTCAGCACTAATCTCTATTAGGAAGAGGAATAGGATTTGTGCAACAAGCAATGTGCAA
ATAATGGCTTCTGATTCTGATCTTTATATAGCAATGATTCATCACAAAATCATTGTCAAG
ATTGGACCAAAACTTGATCTTGGAAATCTTATTCCACCTAATTATGAGGTGGCAACTTCT
GGACAAGACTATGCTGTATGGGAGCAAAAGGCATAA

Peptide Sequence

PEP ID

Solyc04g078930.3.1
PEP Infomation

Alpha-amylase (AHRD V3.3 *** K4BUX7_SOLLC)
Sequence

MPGRLYDLDASKFGNQQQLKTLIKALHDHGIKSVADIVINHRTADNKDSRGIYSIFEGGT
SDDRLDWGPSFICKNDTQYSDGTGNPDTGLDFEPAPDIDHLNTRVQKELSDWMNWLKSEI
GFDGWRFDFVRGYAPCITKIYMGNTSPDFAVGELWNSLAYGQDGKPEYNQDNHRNELVGW
VKNAGRAVTAFDFTTKGILQAAVQEELWRLKDPNGKPPGMIGVLPRKAVTFIDNHDTGST
QNMWPFPSDKVMQGYAYILTHPGIPSVFYDHFFDWGFKDGISALISIRKRNRICATSNVQ
IMASDSDLYIAMIHHKIIVKIGPKLDLGNLIPPNYEVATSGQDYAVWEQKA*

Transcript Sequence

Transcript ID

Solyc04g078930.3.1
Transcript Infomation

Alpha-amylase (AHRD V3.3 *** K4BUX7_SOLLC)
Sequence

ATGCCAGGAAGGTTGTATGACTTGGATGCTTCCAAGTTTGGAAATCAGCAACAACTGAAA
ACTCTTATTAAGGCTTTACATGACCACGGGATCAAATCGGTTGCTGATATAGTGATAAAT
CATAGAACTGCTGATAACAAAGATAGCAGGGGAATATACAGCATCTTTGAAGGAGGAACA
TCTGATGACCGGCTTGATTGGGGTCCATCTTTCATTTGCAAGAACGACACACAATATTCT
GATGGCACGGGGAATCCAGACACGGGTTTGGACTTTGAACCTGCACCTGATATCGATCAT
CTTAATACGAGAGTGCAGAAAGAGTTATCAGACTGGATGAACTGGCTGAAATCTGAAATT
GGATTTGATGGTTGGCGTTTCGATTTTGTTAGGGGATATGCACCTTGCATTACCAAAATT
TATATGGGAAACACGTCCCCGGATTTTGCTGTTGGTGAATTGTGGAACTCTCTTGCTTAT
GGCCAGGACGGGAAACCGGAATATAACCAGGACAATCATAGAAATGAGCTAGTTGGTTGG
GTAAAAAATGCGGGGCGGGCTGTAACAGCTTTTGATTTTACAACAAAGGGAATTCTTCAA
GCTGCAGTTCAAGAAGAGTTATGGAGATTGAAGGATCCCAATGGAAAACCTCCTGGGATG
ATCGGTGTTTTGCCTCGAAAAGCTGTGACTTTTATCGATAATCATGATACTGGATCGACA
CAAAATATGTGGCCTTTCCCTTCAGACAAAGTTATGCAAGGATATGCATACATTCTTACT
CATCCAGGAATCCCATCCGTGTTTTATGACCATTTCTTTGATTGGGGCTTCAAGGATGGA
ATTTCAGCACTAATCTCTATTAGGAAGAGGAATAGGATTTGTGCAACAAGCAATGTGCAA
ATAATGGCTTCTGATTCTGATCTTTATATAGCAATGATTCATCACAAAATCATTGTCAAG
ATTGGACCAAAACTTGATCTTGGAAATCTTATTCCACCTAATTATGAGGTGGCAACTTCT
GGACAAGACTATGCTGTATGGGAGCAAAAGGCATAATCATATTGTACCACACTAAAAGGG
ACCATGGCCACAATGGTTCTCATTAGTGTTAATGTTATATGATTGAAAATGTAATTTATA
TTGACATAATGAAGGCCAAAAATTCAAGAAATTATAAACAATTCAATAGTCCTTGCTCAA