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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g078790.3.1
CDS Infomation

basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AHRD V3.3 *** AT3G50330.1)
Sequence

ATGGATATTGATATGCTTAAATCATCAGCAACTTCTGAAGATCAAATGGAAATGATGCTC
ATGATGCAATTGGAGAAATTTCCTGAGTTTTCTACCGGTAACTGTTCTGAATTACCAATG
ATGGAGTTTAGTCCACAAGGAAGTTGCAACAGCAGCAACAATTTCCAACAAATGGATCAA
AATTCACCTAATTTTCTCAACATGCCTTCTACTATTTCATTCACAAACTCACCTCCAATT
CATCAAAATTCACCTAATTTTATACCTAATTCGGGTGGATTTAATTCGAATTCGATGAAC
CGAAGCAATATGGCAGCAATGAGGGAGATGATATTCAGAATTGCAGCAATGCAGCCGATT
AACATCGATCCTGAATCAGTGAAACCACCAAAGAGAAGGAACGTTAAGATATCAACGGAT
CCACAGAGCGTTGCGGCGCGACACAGGAGAGAAAGGATAAGTGAAAGGATAAGAATATTA
CAGAGATTAGTACCAGGAGGAACAAAAATGGATACTGCATCAATGTTAGATGAAGCAATA
CATTATGTGAAATTTTTGAAAAATCAGGTGCAATCACTGGAAAGGGCAGGTGCAACTAGG
CCAGCTAATGGTACTGCTCTTACTGCTGCAGCTGCAGGATTAGGATTCCCTGTACCAATG
TCTTTGAGTGGGAATTATAATTTGCCTGTCAGTACAAAAAATTATCATCATCAAAATATT
CAACAATATGCAGATGTCTAA

Peptide Sequence

PEP ID

Solyc04g078790.3.1
PEP Infomation

basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AHRD V3.3 *** AT3G50330.1)
Sequence

MDIDMLKSSATSEDQMEMMLMMQLEKFPEFSTGNCSELPMMEFSPQGSCNSSNNFQQMDQ
NSPNFLNMPSTISFTNSPPIHQNSPNFIPNSGGFNSNSMNRSNMAAMREMIFRIAAMQPI
NIDPESVKPPKRRNVKISTDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAI
HYVKFLKNQVQSLERAGATRPANGTALTAAAAGLGFPVPMSLSGNYNLPVSTKNYHHQNI
QQYADV*

Transcript Sequence

Transcript ID

Solyc04g078790.3.1
Transcript Infomation

basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AHRD V3.3 *** AT3G50330.1)
Sequence

ACAATTCGTTATATATAGCCTTAAATTCCCACTTGAGCCTAGATGATCTGTTTCCAATAT
CACACTATTTTATTCCCCTTTCAATTTCTTCACTTCTCCCCCAACTCTATTAGCTATTAT
ATCAAAAAACATACTACCAATAGTAGTACTACCATTTTCACTGCAATATTCTGATAAAAC
TCTCACTTCACTCTTTCTTCTTTCTCATTCCTCTGCTTCAATAAACCATAATTATTACTC
ACTTCTTTAAAAGAGAGTGATTTGGACTTGCAAAAAAAAAAAGTACTAGCCATGGATATT
GATATGCTTAAATCATCAGCAACTTCTGAAGATCAAATGGAAATGATGCTCATGATGCAA
TTGGAGAAATTTCCTGAGTTTTCTACCGGTAACTGTTCTGAATTACCAATGATGGAGTTT
AGTCCACAAGGAAGTTGCAACAGCAGCAACAATTTCCAACAAATGGATCAAAATTCACCT
AATTTTCTCAACATGCCTTCTACTATTTCATTCACAAACTCACCTCCAATTCATCAAAAT
TCACCTAATTTTATACCTAATTCGGGTGGATTTAATTCGAATTCGATGAACCGAAGCAAT
ATGGCAGCAATGAGGGAGATGATATTCAGAATTGCAGCAATGCAGCCGATTAACATCGAT
CCTGAATCAGTGAAACCACCAAAGAGAAGGAACGTTAAGATATCAACGGATCCACAGAGC
GTTGCGGCGCGACACAGGAGAGAAAGGATAAGTGAAAGGATAAGAATATTACAGAGATTA
GTACCAGGAGGAACAAAAATGGATACTGCATCAATGTTAGATGAAGCAATACATTATGTG
AAATTTTTGAAAAATCAGGTGCAATCACTGGAAAGGGCAGGTGCAACTAGGCCAGCTAAT
GGTACTGCTCTTACTGCTGCAGCTGCAGGATTAGGATTCCCTGTACCAATGTCTTTGAGT
GGGAATTATAATTTGCCTGTCAGTACAAAAAATTATCATCATCAAAATATTCAACAATAT
GCAGATGTCTAATTAATCAGTAGTATAAATGGAAGAAATTTGTGGGGTTGTAAATTAGAA
ACCATGCATGGGTAGAAGAATAATTTATACTATATATTATAACCATGGTATATAGAGACC
CCTATTGATCTGTTAATAAAATTTTATGTTTCATGTACTCTCTCTTTTCTATGTATAATA
ATTATTATCTAACCATCTATCATGAACGGTCCTGGTAAGTATCTTTTCACCCTTTATTAG
ATATTTTTCGTGTTTGAGCATCT