Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc04g078680.3.1
CDS Infomation	RING/U-box superfamily protein (AHRD V3.3 *** AT5G42940.2)
Sequence	ATGCAAGGGCAACGGAGTGCAATCGGATCCCTGCCAGAAACTTTGGGTTTTACTCATGGT TCAACATCGAGTGATGGTGGTATAGATCAGCAGATATGTTGGAATAATTTGCGAAATCCT GCACAAAATCGGCTACCAGATTATATGGTACCTTCTAATGAGACAACCATACCATTTCTT AGTCATGCAAACCAAGAAAGGCAGAGTGTAATTGGATGGAATTTAGGAGAATCCAGCTCC TCCAATACACAAAATAGTGTTAGTCGTAGTGAAAATACTACAATGAGTGCCCGTCCTGGG CCTTCTCACTTCTCTGCTGAACAGCATTATGGGTCTTCCAATATTCTTTCATTGGGTGAT GTTGAAATAAATTTGAATAACCAGTTAGCTAACAACACTTTATTTTCTCAAGCTTCTACG TCTAGCACTGTTCCAAATGAACTAAGTAGAAGTGCTGGACATGAGGGGCGTGATGGCGAT GAAGATGATGATGATGACTGCGAAGTGATGGAGTGCACCCCAACATTCAAGTCTAATGGA CCTGGAAAAGAACGGATGTCAACCGCCAGTACTTCTTCTGATCCCCTTGCTGGGACTTCT GCAACTAATGGGTTTCTGAGGGATGAAAGTGATGGCAGACCAGGCTGTACACTGGATGGT CGACGCATGGCTTGTAAGAGAAAAGCAGTTGAAGGACATCTGGGACAATCTTCGGGAAGT GGAAGTCCAGATTATCTTCTAAACAGCTTATGGCGTTCTATACCTGCTCCAAATAATCTG ACTGCAGGTGCTAATAGCTCTGCATCAACAGAAAGTAGAAGAAACATCAATTTGCCAGCG CAGATAAATCCAAGACTTGGGCTCACTATGGGTGGCACCACTATGGAAGGTCCGGTTGCA TTGCCTGCTTCAAGGAGAGCAGAAAGTTACCGTAGAAATTTCAGGCTTAGGATCAATGGC TCTCATCAGCAAGTTCCTATTCCTGGCAATACGTTTCCTACTGTGGGTAATGATAGAAAT GTTACCATGTCTGACTGGGACGCATTGAGGCTGCCTTCTAATCAGTCTTTGGATTCGAGG TCTGTTTCTGCTGCAGATAATGTAAGTCCCCGAAGCCAGCCAGTTGTGGGGCCGGTTCCT TCTCTGCGACGAAATGCACAGAGGTGGGATTCATCTAGTTCAAGAGCTGGCAGTCCATCA AGTTATTCTGTTTTTCTTGAGAGGAATTCTGCAGCCTATGAACAACCAAGCTCAAGAAGT GTGCCCAGAAACATTTCGCAGCATCCAATGTTCATACCCGCTAGTGACTTGAGAAATTTG AACCAAAATCCTGTCAACTGGGGTTTAGCTGGTGGAAATATTTCCATTGCTGGAAATGTT GCATCTTCTTCTCGGAGTGGTCCTAGCTCAGTAGCCCCTTCCTCTTCTCCTGGTTGGGTG GAACAAAGAAATCCTCAGCAATATCCTCGACGACTCTCAGAATATGTTCGTAGATCTATG TTGTCTTCAGCTGTCAGTGAACCTGGAAGTCACAATGGTAACACTCCGCCACATTTGAGT TCTGCTACCTCACAGGAGATGGGGCTTTCTGGCCATCCCGGGCATCGTCCATCAAGTTCA AGGTCAGCATTGTTGTTGGAGAGACAACTCGATGGTGCAATGGGAGTTCCATATTCCTGG AGGACTTTGGCTGCTGCCGGTGAAGGAAGAGGCAGGCTAGTTTCCGAGCAGATTCGCAAT GTGTTGGATCTAATGCGCAGGGGAGAGAGCTTAAGATTTGAGGACGTTATGATCCTCGAT CAGTCAGGGTTCTTTGGGATGGTGGATATTCAGGATCGCCATCGTGATATGCGTCTTGAT GTTGATAACATGTCCTATGAGGAACTACTGGCGCTTGAGGAGCGCATAGGGAATGTCTGC ACCGGGCTAACTGAAGAAACCATTTTGAATCGTCTGAAGCAACGGAAACATGTTAGCATT AGAACAGAAGAAACCAATGATGCTGAGCCATGCTGTATTTGTCAGGAAGAATACAAGGAT GGTGAGGATCTTGGGAAGCTGGATTGTGGCCATGATTTTCATGCCGACTGCGTTAAACAA TGGCTCATGCAGAAGAATTTGTGCCCAATTTGCAAAACAACAGGACTCAATACTTCAGGA AAACAATGA

Peptide Sequence

PEP ID	Solyc04g078680.3.1
PEP Infomation	RING/U-box superfamily protein (AHRD V3.3 *** AT5G42940.2)
Sequence	MQGQRSAIGSLPETLGFTHGSTSSDGGIDQQICWNNLRNPAQNRLPDYMVPSNETTIPFL SHANQERQSVIGWNLGESSSSNTQNSVSRSENTTMSARPGPSHFSAEQHYGSSNILSLGD VEINLNNQLANNTLFSQASTSSTVPNELSRSAGHEGRDGDEDDDDDCEVMECTPTFKSNG PGKERMSTASTSSDPLAGTSATNGFLRDESDGRPGCTLDGRRMACKRKAVEGHLGQSSGS GSPDYLLNSLWRSIPAPNNLTAGANSSASTESRRNINLPAQINPRLGLTMGGTTMEGPVA LPASRRAESYRRNFRLRINGSHQQVPIPGNTFPTVGNDRNVTMSDWDALRLPSNQSLDSR SVSAADNVSPRSQPVVGPVPSLRRNAQRWDSSSSRAGSPSSYSVFLERNSAAYEQPSSRS VPRNISQHPMFIPASDLRNLNQNPVNWGLAGGNISIAGNVASSSRSGPSSVAPSSSPGWV EQRNPQQYPRRLSEYVRRSMLSSAVSEPGSHNGNTPPHLSSATSQEMGLSGHPGHRPSSS RSALLLERQLDGAMGVPYSWRTLAAAGEGRGRLVSEQIRNVLDLMRRGESLRFEDVMILD QSGFFGMVDIQDRHRDMRLDVDNMSYEELLALEERIGNVCTGLTEETILNRLKQRKHVSI RTEETNDAEPCCICQEEYKDGEDLGKLDCGHDFHADCVKQWLMQKNLCPICKTTGLNTSG KQ*

Transcript Sequence

Transcript ID	Solyc04g078680.3.1
Transcript Infomation	RING/U-box superfamily protein (AHRD V3.3 *** AT5G42940.2)
Sequence	ATTTGGAATTTGATTTTTGGGTTATAAATCTTTTATTAAAAGGGTGTGAAAGGGGGTGTT TTGTGTTAAAGATTATTGTCCCCTCTCTTTAGTCCACCAGGTCAGGCCACCTCTTTTCCT CTCTCTTTCTCATTCTTGTTTTCTCATTTTTCCTCTTTATTTTTTCTTCACAAACCCACC ATTTCTTTCTAATCTCATCTTGTTTTCTTCATTAATCTAGTGTTAAAGAGGTGGTGACTT TAGATCTGTTGCTTCATCTGCTGATGTTTTGGAGGTCTGCTTAGCGGTGAAGTTTGAGAC ACTGCTGTCACTACAATACTATCTTTGTCTTTTGGAGATTGTGAATATAGAGTTATAGGC CTAATGCAAGGGCAACGGAGTGCAATCGGATCCCTGCCAGAAACTTTGGGTTTTACTCAT GGTTCAACATCGAGTGATGGTGGTATAGATCAGCAGATATGTTGGAATAATTTGCGAAAT CCTGCACAAAATCGGCTACCAGATTATATGGTACCTTCTAATGAGACAACCATACCATTT CTTAGTCATGCAAACCAAGAAAGGCAGAGTGTAATTGGATGGAATTTAGGAGAATCCAGC TCCTCCAATACACAAAATAGTGTTAGTCGTAGTGAAAATACTACAATGAGTGCCCGTCCT GGGCCTTCTCACTTCTCTGCTGAACAGCATTATGGGTCTTCCAATATTCTTTCATTGGGT GATGTTGAAATAAATTTGAATAACCAGTTAGCTAACAACACTTTATTTTCTCAAGCTTCT ACGTCTAGCACTGTTCCAAATGAACTAAGTAGAAGTGCTGGACATGAGGGGCGTGATGGC GATGAAGATGATGATGATGACTGCGAAGTGATGGAGTGCACCCCAACATTCAAGTCTAAT GGACCTGGAAAAGAACGGATGTCAACCGCCAGTACTTCTTCTGATCCCCTTGCTGGGACT TCTGCAACTAATGGGTTTCTGAGGGATGAAAGTGATGGCAGACCAGGCTGTACACTGGAT GGTCGACGCATGGCTTGTAAGAGAAAAGCAGTTGAAGGACATCTGGGACAATCTTCGGGA AGTGGAAGTCCAGATTATCTTCTAAACAGCTTATGGCGTTCTATACCTGCTCCAAATAAT CTGACTGCAGGTGCTAATAGCTCTGCATCAACAGAAAGTAGAAGAAACATCAATTTGCCA GCGCAGATAAATCCAAGACTTGGGCTCACTATGGGTGGCACCACTATGGAAGGTCCGGTT GCATTGCCTGCTTCAAGGAGAGCAGAAAGTTACCGTAGAAATTTCAGGCTTAGGATCAAT GGCTCTCATCAGCAAGTTCCTATTCCTGGCAATACGTTTCCTACTGTGGGTAATGATAGA AATGTTACCATGTCTGACTGGGACGCATTGAGGCTGCCTTCTAATCAGTCTTTGGATTCG AGGTCTGTTTCTGCTGCAGATAATGTAAGTCCCCGAAGCCAGCCAGTTGTGGGGCCGGTT CCTTCTCTGCGACGAAATGCACAGAGGTGGGATTCATCTAGTTCAAGAGCTGGCAGTCCA TCAAGTTATTCTGTTTTTCTTGAGAGGAATTCTGCAGCCTATGAACAACCAAGCTCAAGA AGTGTGCCCAGAAACATTTCGCAGCATCCAATGTTCATACCCGCTAGTGACTTGAGAAAT TTGAACCAAAATCCTGTCAACTGGGGTTTAGCTGGTGGAAATATTTCCATTGCTGGAAAT GTTGCATCTTCTTCTCGGAGTGGTCCTAGCTCAGTAGCCCCTTCCTCTTCTCCTGGTTGG GTGGAACAAAGAAATCCTCAGCAATATCCTCGACGACTCTCAGAATATGTTCGTAGATCT ATGTTGTCTTCAGCTGTCAGTGAACCTGGAAGTCACAATGGTAACACTCCGCCACATTTG AGTTCTGCTACCTCACAGGAGATGGGGCTTTCTGGCCATCCCGGGCATCGTCCATCAAGT TCAAGGTCAGCATTGTTGTTGGAGAGACAACTCGATGGTGCAATGGGAGTTCCATATTCC TGGAGGACTTTGGCTGCTGCCGGTGAAGGAAGAGGCAGGCTAGTTTCCGAGCAGATTCGC AATGTGTTGGATCTAATGCGCAGGGGAGAGAGCTTAAGATTTGAGGACGTTATGATCCTC GATCAGTCAGGGTTCTTTGGGATGGTGGATATTCAGGATCGCCATCGTGATATGCGTCTT GATGTTGATAACATGTCCTATGAGGAACTACTGGCGCTTGAGGAGCGCATAGGGAATGTC TGCACCGGGCTAACTGAAGAAACCATTTTGAATCGTCTGAAGCAACGGAAACATGTTAGC ATTAGAACAGAAGAAACCAATGATGCTGAGCCATGCTGTATTTGTCAGGAAGAATACAAG GATGGTGAGGATCTTGGGAAGCTGGATTGTGGCCATGATTTTCATGCCGACTGCGTTAAA CAATGGCTCATGCAGAAGAATTTGTGCCCAATTTGCAAAACAACAGGACTCAATACTTCA GGAAAACAATGATCCATGGAAGTTTGATGTACCAGTTGGACCATGGAAGGTTGACACAAA GCGTGTCTACGCGTTTGGTCCATGAGTTCATTCTGAGTGAGAAAGATCTATGTATTTTTC TCATTAATTTTATTCTGACCTCTGCTTAGAGGGAGTTATTTTAGAGATAGAAGAAGCACT AGCTACAATTAGGGTCATTAGGCAAGAGTTATACATTATTTGGTTGTTTGGAAATTTACA TTCTTACTTTCCAATTTATTGATACCTTTGAATATTT