Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g078320.3.1
CDS Infomation

WD40 repeat-like protein (AHRD V3.3 *** I0YVP9_COCSC)
Sequence

ATGGACACAAAACCCAATGGAGATAAAGAGATTGTTAGACATGAGGAGAATGGAAAGGCT
GGAGATCCAGAGCCCATGGAGATCTGCACAAGCTCAACCGCCTTGCCATGTGAAATACCG
AGTTCTGATTTACTGATTTTGGAAGGCCATACATCAGAGGTTTTCGCATGTGCCTGGAGT
CCAGACGGTTCACTTCTTGCATCTGGGTCTGGAGATTCTACTGCTAGAATTTGGACAATT
GGAGATGGTCCTTGTAATTCCCATATGCAAAATGGGCCAGTAAATGTCATGGTATTAAAA
CATTTTAAAGGACGAACAAATGAGAAGAGCAAGGATGTCACTACACTTGAGTGGAATGTA
AGGGCGAGGGACACCTACTTGCAACAGGTTCTTATGATGGGCAAGCAAGAATTTGGAACC
GAGAGGTGGTACTGGGAGCCGAAGGCTATCTTGTGTAGGGAACTGGTAAATACACTAATC
AAACATAAAGGGCCAATCTTCTCTTTGAAGTGGAATAAGAAAGGTGATTATCTTCTTAGT
GGTAGTGTAGACAAAACCGCAATTGTATGGGATGTAAAGTCAGGTGAATGGAAGCAGCAA
TTTGAATTTCATTCAGCTCCAACTCTTGATGTTGATTGGCGAAACAACAATTCCTTTGCG
ACTTGCTCCACTGATAACATGATTTATGTTTGTAAAGTTGGAGAGAGTCGGCCTCTCAAA
GCTTTCTCGGGACATCAGAGTGAAGTCAATGCAATCAAGTGGGACCCCTCAGGCTCCTTG
TTGGCGTCATGCTCTGATGACACCACAGCTAAGATATGGAGTGTGAAACAAGATACCTGC
TTGCATGATTTCAGAGAGCATGCCAAGGAGATCTATACCATCAGATGGAGTCCATGTGGC
CCTGGTACAAGCAACCCAAATCAACAGTTGTTGCTGGCAAGTGCTTCTTTTGACTCCACA
GTGAAGCTTTGGGATGTTGAAATTGGCCGTCTTGTCCACAGCTTGAATGGTCATAGGGAT
CCTGTTTACTCTGTCGCGTTTAGCCCAAACAGTGAGTACTTGGCTACTGGGTCATTGGAT
AGATGCTTGAATATATGGTCTGTG

Peptide Sequence

PEP ID

Solyc04g078320.3.1
PEP Infomation

WD40 repeat-like protein (AHRD V3.3 *** I0YVP9_COCSC)
Sequence

MDTKPNGDKEIVRHEENGKAGDPEPMEICTSSTALPCEIPSSDLLILEGHTSEVFACAWS
PDGSLLASGSGDSTARIWTIGDGPCNSHMQNGPVNVMVLKHFKGRTNEKSKDVTTLEWNV
RARDTYLQQVLMMGKQEFGTERWYWEPKAILCRELVNTLIKHKGPIFSLKWNKKGDYLLS
GSVDKTAIVWDVKSGEWKQQFEFHSAPTLDVDWRNNNSFATCSTDNMIYVCKVGESRPLK
AFSGHQSEVNAIKWDPSGSLLASCSDDTTAKIWSVKQDTCLHDFREHAKEIYTIRWSPCG
PGTSNPNQQLLLASASFDSTVKLWDVEIGRLVHSLNGHRDPVYSVAFSPNSEYLATGSLD
RCLNIWSV

Transcript Sequence

Transcript ID

Solyc04g078320.3.1
Transcript Infomation

WD40 repeat-like protein (AHRD V3.3 *** I0YVP9_COCSC)
Sequence

AAAAGCACGCGAGGATCTCAAACCACGTGAGGATCTCATGGACACAAAACCCAATGGAGA
TAAAGAGATTGTTAGACATGAGGAGAATGGAAAGGCTGGAGATCCAGAGCCCATGGAGAT
CTGCACAAGCTCAACCGCCTTGCCATGTGAAATACCGAGTTCTGATTTACTGATTTTGGA
AGGCCATACATCAGAGGTTTTCGCATGTGCCTGGAGTCCAGACGGTTCACTTCTTGCATC
TGGGTCTGGAGATTCTACTGCTAGAATTTGGACAATTGGAGATGGTCCTTGTAATTCCCA
TATGCAAAATGGGCCAGTAAATGTCATGGTATTAAAACATTTTAAAGGACGAACAAATGA
GAAGAGCAAGGATGTCACTACACTTGAGTGGAATGTAAGGGCGAGGGACACCTACTTGCA
ACAGGTTCTTATGATGGGCAAGCAAGAATTTGGAACCGAGAGGTGGTACTGGGAGCCGAA
GGCTATCTTGTGTAGGGAACTGGTAAATACACTAATCAAACATAAAGGGCCAATCTTCTC
TTTGAAGTGGAATAAGAAAGGTGATTATCTTCTTAGTGGTAGTGTAGACAAAACCGCAAT
TGTATGGGATGTAAAGTCAGGTGAATGGAAGCAGCAATTTGAATTTCATTCAGCTCCAAC
TCTTGATGTTGATTGGCGAAACAACAATTCCTTTGCGACTTGCTCCACTGATAACATGAT
TTATGTTTGTAAAGTTGGAGAGAGTCGGCCTCTCAAAGCTTTCTCGGGACATCAGAGTGA
AGTCAATGCAATCAAGTGGGACCCCTCAGGCTCCTTGTTGGCGTCATGCTCTGATGACAC
CACAGCTAAGATATGGAGTGTGAAACAAGATACCTGCTTGCATGATTTCAGAGAGCATGC
CAAGGAGATCTATACCATCAGATGGAGTCCATGTGGCCCTGGTACAAGCAACCCAAATCA
ACAGTTGTTGCTGGCAAGTGCTTCTTTTGACTCCACAGTGAAGCTTTGGGATGTTGAAAT
TGGCCGTCTTGTCCACAGCTTGAATGGTCATAGGGATCCTGTTTACTCTGTCGCGTTTAG
CCCAAACAGTGAGTACTTGGCTACTGGGTCATTGGATAGATGCTTGAATATATGGTCTGT
G