Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g078160.3.1
CDS Infomation

C5orf35 (AHRD V3.3 *** AT5G23200.1)
Sequence

ATGGCTTTCCTCTTCCACAAATTTCAAGAGGGAGTGAAAATTCTTGCTAAAAGCCCCACT
TTTGCTAGAGAATCGAGGCTTCTTCAGTTCGAAGCTGACATAAATCTACTATTCCTTTAC
ACCAGTTACAACCGTTTAGGAAGGAATGCCGAAGAAGCTGATGCAGAGGAGATTATTGAT
ATGGCTAACAAAGCCTCATTAGACGATCAACAGAAGCAAGTTCATGAGAATGTGCATTCT
CAGGTTACAAACTTTTGCAGCTATATGGATGACATATTACTCCTGGATCAAAAGGTCAAA
GACAATCAGGCCACATCACCAGCAACACTACATTTTTCTCCTCGTAGTAGTGGCCTTGGT
CTTGCTGTTGATGGGAATTCTCTAGCACAAGACCGCATTGTACCCACAGCCGTACCTGAA
ACCAAGACACTGCACCGCACAGAAGTTTCACAGAGGTTAAAAGATCTTATGGGCTACACT
CTCGAGGTCAAACCATCTCAAATTCCTCATGAGGATGCTGGAAAGGGTTTATTCTTACAA
GGTGAAGCCAATATTGGTTCTGTCATAGCATTCTATCCTGGAGTAGTCTACCCTCCAGCA
TATTACCGCTATATTCCTGGGTACCCTAGAGTTGATGCCCAAAATCCACATCTGATCACA
CGGTATGATGGGACTATGATCAATGCTCAGCCCTGGGGTGCTGGTGGTGAATGTCGTGAA
TTATGGGATTGGACCAGTTCTCCTGAACCTAAGTGCACTATGCAAGCTGGTGAAAAAGGT
TCTGACCTAGATGGAACAGACGTTGGAGGCAACCTTGAAGTGTTTGAGAGGAGAAACCCT
CTAGCCTTTGCTCATTTCGCCAACCACCCAGCCAAAGGCATGGTCCCCAATGTAATGGTA
TACCCTTATGATTTCCCCCTGCTTGAGGAGGACATGAGACCCTATATACCTAATGTTTCA
TTTGGAAACGATGAAGAAACAGAGACTAGTAAATTTGGCAGCTTTAGGTTCATCAAAATG
TGGAAGTCCAACAACAATGAATCAAAAGTCCCCGTTCTGAAGACACTTCTTCTTGTGGCT
ACTAGGGCAATTTGTGATGAAGAGGTTATGTTGAACTACAGACTGAGCAATTCAGAGCAC
ATACCGTCATGGTATACTCCAGTAGATGAAGAGGACTAA

Peptide Sequence

PEP ID

Solyc04g078160.3.1
PEP Infomation

C5orf35 (AHRD V3.3 *** AT5G23200.1)
Sequence

MAFLFHKFQEGVKILAKSPTFARESRLLQFEADINLLFLYTSYNRLGRNAEEADAEEIID
MANKASLDDQQKQVHENVHSQVTNFCSYMDDILLLDQKVKDNQATSPATLHFSPRSSGLG
LAVDGNSLAQDRIVPTAVPETKTLHRTEVSQRLKDLMGYTLEVKPSQIPHEDAGKGLFLQ
GEANIGSVIAFYPGVVYPPAYYRYIPGYPRVDAQNPHLITRYDGTMINAQPWGAGGECRE
LWDWTSSPEPKCTMQAGEKGSDLDGTDVGGNLEVFERRNPLAFAHFANHPAKGMVPNVMV
YPYDFPLLEEDMRPYIPNVSFGNDEETETSKFGSFRFIKMWKSNNNESKVPVLKTLLLVA
TRAICDEEVMLNYRLSNSEHIPSWYTPVDEED*

Transcript Sequence

Transcript ID

Solyc04g078160.3.1
Transcript Infomation

C5orf35 (AHRD V3.3 *** AT5G23200.1)
Sequence

CTCTTTGAAATTAGTGCAGCAGCAGTCAAGAAGATCAGCAGGCAACGATCGAGCCATGGC
TTTCCTCTTCCACAAATTTCAAGAGGGAGTGAAAATTCTTGCTAAAAGCCCCACTTTTGC
TAGAGAATCGAGGCTTCTTCAGTTCGAAGCTGACATAAATCTACTATTCCTTTACACCAG
TTACAACCGTTTAGGAAGGAATGCCGAAGAAGCTGATGCAGAGGAGATTATTGATATGGC
TAACAAAGCCTCATTAGACGATCAACAGAAGCAAGTTCATGAGAATGTGCATTCTCAGGT
TACAAACTTTTGCAGCTATATGGATGACATATTACTCCTGGATCAAAAGGTCAAAGACAA
TCAGGCCACATCACCAGCAACACTACATTTTTCTCCTCGTAGTAGTGGCCTTGGTCTTGC
TGTTGATGGGAATTCTCTAGCACAAGACCGCATTGTACCCACAGCCGTACCTGAAACCAA
GACACTGCACCGCACAGAAGTTTCACAGAGGTTAAAAGATCTTATGGGCTACACTCTCGA
GGTCAAACCATCTCAAATTCCTCATGAGGATGCTGGAAAGGGTTTATTCTTACAAGGTGA
AGCCAATATTGGTTCTGTCATAGCATTCTATCCTGGAGTAGTCTACCCTCCAGCATATTA
CCGCTATATTCCTGGGTACCCTAGAGTTGATGCCCAAAATCCACATCTGATCACACGGTA
TGATGGGACTATGATCAATGCTCAGCCCTGGGGTGCTGGTGGTGAATGTCGTGAATTATG
GGATTGGACCAGTTCTCCTGAACCTAAGTGCACTATGCAAGCTGGTGAAAAAGGTTCTGA
CCTAGATGGAACAGACGTTGGAGGCAACCTTGAAGTGTTTGAGAGGAGAAACCCTCTAGC
CTTTGCTCATTTCGCCAACCACCCAGCCAAAGGCATGGTCCCCAATGTAATGGTATACCC
TTATGATTTCCCCCTGCTTGAGGAGGACATGAGACCCTATATACCTAATGTTTCATTTGG
AAACGATGAAGAAACAGAGACTAGTAAATTTGGCAGCTTTAGGTTCATCAAAATGTGGAA
GTCCAACAACAATGAATCAAAAGTCCCCGTTCTGAAGACACTTCTTCTTGTGGCTACTAG
GGCAATTTGTGATGAAGAGGTTATGTTGAACTACAGACTGAGCAATTCAGAGCACATACC
GTCATGGTATACTCCAGTAGATGAAGAGGACTAAGGGCATTGGAGCTAAGATCATTATGA
TGATGGATGCATATACAAGGTGTTGAACAACCATATAAGCAAACACATTTACACGATCAT
CAGTCATTGCTCAAGGCCAGCGAAGAATGCCACATTAATCTTGGTGATGATATCTGGTTC
CCTTTCAGTTCTCAACAGTTAGGAATTATGTAACTAGAAAACGTTGTGATGAGCTCTAGA
AATGTTTGAAGTTTGCTCAGACCTTGAGTAACTGAATAAGGCAGGAAAGGAATACATCTA
TAATTGAAAGGACGAACTCAAGACTCTGTTTAAATCAAAATCCTGTTTTTTTTGTGCTTT
GTTATTCAGTTATTACTGCTCATTTTTGTGATTCATTAATTGACTAAGACTCAGAAATTC
TATTGCACTTGCTTAAG