Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g077920.3.1
CDS Infomation

Interferon-related developmental regulator family protein (AHRD V3.3 *** B9IBS1_POPTR)
Sequence

ATGGGTAGAAGAAGTTCACAACGTAGGAATGCTGCTATGCTGGATAGTGATGACACGGAT
AGCTTGAGTTCATCATCAACTACTCGGTCGGATATGATGTTGTCTGGTTTAGAGGAGGTG
CAATTTGACAAGGAGACTGTCCTTGATCAATGTGTGGATGCCCTTTATGAGAAAAGGGGA
TCAACAAGAGAGAAGGCTTTGACATCTATTATAGAAGCATTCAATAGCAACATACAACAT
GAATTTGTTGAAAAGAAGTTTGCCACATTATTGCAGCTATGTTTGAGTTCCATTAGACGT
GGTTCCTCCAAGGAGATAGCTTTGGCATCTCATGTTATTGGGCTTCTTGCTTTAACTGCT
GGCCCTGGAGACAAAGCACACGAGATTCTGGAAGAATCAGTAAAACCTATCTCAGTTGCT
CTTAAATCTCGATCTGACAATTCTAAAATATCCTCGTTACTGGAGTGTTTGGCCATTATC
ACCTTTGTTGGTGGCAAAGAACCTGAGGAAACAGAAGAGTCTATGCAATTGATGTGGCAA
GTCATCAATCCAAAACTGGGTCCCAATGTGGCTACTGCTAAACCTTCACCAGTAATGATA
ACAGCAGTTGTATCTTCTTGGTCTTTCCTTCTTACTACCATGGATGGGTGGACACTAAAC
CCAAAAAGTTGGCAAGGGTCAATCTCCTACTTCTCAAATCTTCTAGACAAGGAAGACCGA
TCTGTGCGCATTGCAGCTGGCGAAACACTTGCTTTAGTTTTTGAAGTTGGGAGTCTGGAA
AAGTTTTCTGGTGAATCTAAAGAATCTAGTGACAGCTCCGCAGATGAAACTAACAAATCT
AGGGAATTATTACATATACAGGGATTAAGGGCAAAAGTCCTGAACCAAGTAAGAACCCTT
TCAGCAGAGGCTGGAGGTAAAGGGTCAGCCAAGAAGGATCTTAACAATCAAAGGAACACA
TTCCGAGATATATTGGAATTTCTAGAGGATGGGTATAGTCCCGAAACCTCAGTCAAGATT
GGTGGGCTATTGCTTAGCACAAGTACTTGGGCTCATCTGATACAGTTAAACTTCCTTAAG
CACTTCCTTGGAGGAGGATTTGTGAAGCATATGCAGGAAAATGAGTTTCTTCATGATGTA
TTTGGTTTCACACCGAAGAAGAATCTCCCAGCTTCTCAGCATCGTGTATCTGGAACCGAT
AAGAGAAAGTACAAGTCGCCAAATTCCATCCTTAACAAAGCCAGGACTCAATTTCTAAAC
AAGCAAAGAATGTTGTCCCAGGACAAGAATGTCGGCTACTATGAGGGTGGTGATGAGTTC
TGA

Peptide Sequence

PEP ID

Solyc04g077920.3.1
PEP Infomation

Interferon-related developmental regulator family protein (AHRD V3.3 *** B9IBS1_POPTR)
Sequence

MGRRSSQRRNAAMLDSDDTDSLSSSSTTRSDMMLSGLEEVQFDKETVLDQCVDALYEKRG
STREKALTSIIEAFNSNIQHEFVEKKFATLLQLCLSSIRRGSSKEIALASHVIGLLALTA
GPGDKAHEILEESVKPISVALKSRSDNSKISSLLECLAIITFVGGKEPEETEESMQLMWQ
VINPKLGPNVATAKPSPVMITAVVSSWSFLLTTMDGWTLNPKSWQGSISYFSNLLDKEDR
SVRIAAGETLALVFEVGSLEKFSGESKESSDSSADETNKSRELLHIQGLRAKVLNQVRTL
SAEAGGKGSAKKDLNNQRNTFRDILEFLEDGYSPETSVKIGGLLLSTSTWAHLIQLNFLK
HFLGGGFVKHMQENEFLHDVFGFTPKKNLPASQHRVSGTDKRKYKSPNSILNKARTQFLN
KQRMLSQDKNVGYYEGGDEF*

Transcript Sequence

Transcript ID

Solyc04g077920.3.1
Transcript Infomation

Interferon-related developmental regulator family protein (AHRD V3.3 *** B9IBS1_POPTR)
Sequence

TTTGCGTGAAGAGAAATTTTCCTCGAAATTTATTATTAGATCTATAAATAGCAGAGCCAT
TTTTCTCCACAATTTTCTCTTTTTCATTTTCATTGTGATCTTGTGATTTCTCTAGATCTT
CTCCTTTTCTCAATTTTGTCCAAAAAGTTTCTTTATGGATACATTGTTCTTCGATATAAT
CAAAAAGTTTGATTGCTCTCTTTGTTCAACGCCAGCTTTGCCTTTTGATTCCTTTCTTTT
TCATCGTCTGAGTTTTAGTCAAACTTGTATTTGCTTCTAACCTTTTGTTACCTGGAGCTG
TCACCATGGGTAGAAGAAGTTCACAACGTAGGAATGCTGCTATGCTGGATAGTGATGACA
CGGATAGCTTGAGTTCATCATCAACTACTCGGTCGGATATGATGTTGTCTGGTTTAGAGG
AGGTGCAATTTGACAAGGAGACTGTCCTTGATCAATGTGTGGATGCCCTTTATGAGAAAA
GGGGATCAACAAGAGAGAAGGCTTTGACATCTATTATAGAAGCATTCAATAGCAACATAC
AACATGAATTTGTTGAAAAGAAGTTTGCCACATTATTGCAGCTATGTTTGAGTTCCATTA
GACGTGGTTCCTCCAAGGAGATAGCTTTGGCATCTCATGTTATTGGGCTTCTTGCTTTAA
CTGCTGGCCCTGGAGACAAAGCACACGAGATTCTGGAAGAATCAGTAAAACCTATCTCAG
TTGCTCTTAAATCTCGATCTGACAATTCTAAAATATCCTCGTTACTGGAGTGTTTGGCCA
TTATCACCTTTGTTGGTGGCAAAGAACCTGAGGAAACAGAAGAGTCTATGCAATTGATGT
GGCAAGTCATCAATCCAAAACTGGGTCCCAATGTGGCTACTGCTAAACCTTCACCAGTAA
TGATAACAGCAGTTGTATCTTCTTGGTCTTTCCTTCTTACTACCATGGATGGGTGGACAC
TAAACCCAAAAAGTTGGCAAGGGTCAATCTCCTACTTCTCAAATCTTCTAGACAAGGAAG
ACCGATCTGTGCGCATTGCAGCTGGCGAAACACTTGCTTTAGTTTTTGAAGTTGGGAGTC
TGGAAAAGTTTTCTGGTGAATCTAAAGAATCTAGTGACAGCTCCGCAGATGAAACTAACA
AATCTAGGGAATTATTACATATACAGGGATTAAGGGCAAAAGTCCTGAACCAAGTAAGAA
CCCTTTCAGCAGAGGCTGGAGGTAAAGGGTCAGCCAAGAAGGATCTTAACAATCAAAGGA
ACACATTCCGAGATATATTGGAATTTCTAGAGGATGGGTATAGTCCCGAAACCTCAGTCA
AGATTGGTGGGCTATTGCTTAGCACAAGTACTTGGGCTCATCTGATACAGTTAAACTTCC
TTAAGCACTTCCTTGGAGGAGGATTTGTGAAGCATATGCAGGAAAATGAGTTTCTTCATG
ATGTATTTGGTTTCACACCGAAGAAGAATCTCCCAGCTTCTCAGCATCGTGTATCTGGAA
CCGATAAGAGAAAGTACAAGTCGCCAAATTCCATCCTTAACAAAGCCAGGACTCAATTTC
TAAACAAGCAAAGAATGTTGTCCCAGGACAAGAATGTCGGCTACTATGAGGGTGGTGATG
AGTTCTGAACAAGCAGTTGCAGCAACACAGCCCCGCGAAAACATGCAAGGACAATTTTCC
TTGGTGTCGTCATACTATTCATTCATAATCACAGATTTAATGAACAAAATGATTAAAAAA
GATAGTTATTTGATCATTTTGGTTGCTACTTGGTAGTATTCCCTTATTTTTCTTCTTCAT
TATGTAATAAAATACATTGGATTTGTTACCTCTGATGGAGTTCATCAGTAGTGCATAAGA
AATGCCTGCCACTTTCTGTTGAAATTTTTGAAGTAAGGTTTTATTTGGTTTTGTTGGAGT
TGATTTTTTTAAAGGTTAGCATATTTGGGATTGAATGCCATTGGATCTATTTGAATATGA
GTAGTAAATATAACATATTAGATCTAGTATTTTTTAATCTTATTTTTTGACATTCACAAT
ATAATTTATTTTTGGTAGAATTTAACTTCATTTATAAACAGAGA