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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g077270.3.1
CDS Infomation

Serine/threonine-protein kinase (AHRD V3.3 *** M1A1I5_SOLTU)
Sequence

ATGGAATCTAAATGGTTCATACTTTTCTTATTGTCTTTCTACTGTTTTATACAGAAGATT
AGTTCTGCTACGACAAATGTAATCAATACTAATCAGTTCGTAATAGATGGTGAAACTATT
GTTTCATCTGGTGGAACGTTTGAGCTGGGATTTTTCAGCCCGAATGGTTCCACAACGCGA
TATATTGGGATATGGTACAAGCAAATTCTACCTTATGTGCAAACCATTGTATGGGTTGCA
AACAGAGAGAAACCACTCACCAATACATCTTCAGTCGTTTTGAAGGTCAACAAGCCGGGA
ATACTTGCTCTTCTTGATGAAAAAAATGAAACTATATGGTCCACGAACACCTCACGATCA
GTCCAGAATCCAGTTGCAGTGCTGTTGGATTCTGGTAATCTTGTTGTGAAAGATGCAAAT
GATGACAATCCAGAAAATTTCCTATGGCAGAGTTTCAATTTTCCAACGGATACTCTCTTG
CCTGATATGAAACTCGGAAAGAATTTTAAGAGTGGTGTTGAAGCATACCTTTTAGCATGG
AAGAACGATAACGATCCAACTCCAGGGGAATACACTCTCCTCATTGATCCTACTGGATAT
CCACAAGGCGTCATTAGACGTGGAGCAAGGGTATCAGCTCGAGCAGGACCATGGAATGGT
TTACGGTGGAGTGGAGCACCTGCACCACTACAAACACAAAGCAGCATATATACATTTCAA
TTTGTTTTCAATGAAGAGGAGGTTTACTATAGTTTTTCTCTCATTAACAACTCGGTGTTA
ACAAGGCTAGTCCTGACTAACAATGGTTATATACAACGTTTGACGTGGGTGGATAGGACA
AAGAGTTGGCATCTTTACCTCAATATTCCTCTGGATACTTGTGATACATATAGCTTATGT
GGTGCCTATGGAAGCTGTGTCATAGATAGTTCTCCTGTTTGTGGATGTTTGGACAAGTTT
GAACCTAAATATCAACAAAATTGGCAAACGGGAGATTGGTCACAAGGGTGTGTAAGGAAG
ACATCTATCGATTGCAACAAGGAACATGGATTTGTAAAATATTCTGGAATCAAGTTGCCA
GATACTAACAACTCTTGGTACAATAAGACCATGACACTCGAAGGATGTAGGCAAGTATGC
TCAACAAACTGTTCTTGCATAGCATATTCGAGCCTAGATATAAGCAATGGAGATAAAGGT
TGCTTGTTTTGGTCTGGTGAGTTGATTGATATCAGAGAGCTCTCTGGAAGAGGTCAAGAC
ATTTACATACGAATGGATTCTTCAGACCTAGTGTCCTATATCAATTCGAAGAAGCTAATT
AAGAAAATGGTTGTAGTTTCTCAGGCAAGTTCAAACAGAAATAAGACAGGGATACTCGCG
GTGAGTTTCTCAGTTTTGGTGGCAATGATTCTGCTAGGCCTGATTCTGTTTATGTACATA
CGTAAAAAGAGGAAACTAAAACTCAAAGAGGATTTTGAGTTGCCACAGTTTCAACTGTCG
ATAATAACAAGAGCCACAGATAACTTTTCGGTCAACAATCAGATTGGAGAAGGTGGATAT
GGACCTGTTTATAAGGGAGTACTCGAAGAGGGACAAGAAATTGCTGTGAAGAGACTATCA
AGGACTTCCATGCAAGGAATTGATGAATTCAAGAACGAAGTTACCTATATTGCCAAGCTT
CAGCATAGAAATCTTGTGAGACTTTTAGGCTGCTGCATTCAAGGGGAAGAAAAGATGTTG
ATCTACGAATACATGCCTAATAAAAGCCTGGACTCATACATATTTGATCAAACAAAGAAA
AAGTTACTTGATTGGTCAAGGCGTTTCGACATTATTAATGGAATTGCTCGTGGCTTATTG
TATCTCCATCAGGATTCTAGACTACGTATTATCCATAGAGACCTTAAAGCAAGCAATGTT
TTGTTAGATACAGAAATGAATCCAAAGATATCAGACTTTGGCATGGCTCGAAGTGTTGCA
GGAAACGACATGGGAGCAAAAACATGCCATGTCGTTGGGACACACGGTTACATGTCCCCT
GAATATGCAGTAGATGGCATCTTCTCGGTAAAATCAGATGTGTTTAGCTTTGGCGTATTG
GTGTTAGAGATAGTGAGTGGCAAGAGAAATAGAGGATTCGTCCATCAAAATCACAACCTT
AACCTTCTCGGTCACGCATGGAAGCTTTACAAGGAAGATAGATCCTTGGAACTAATTGAT
GAGAAGATAGCTGAATCTTGCCATATTTCTCAAGTTTTAAGGTCAATTCAAGTGGGACTA
TTATGTGTTCAACAATGTCCTGAAGATAGACCAAACATGTCTTCTGTGGTTCAAATGCTA
GGTAATGAGAGTTTATTGGCAGAAGCTAAAGAACCAGGATTTTTCATGGAAAGAACAGTA
CATGATTCAGATAACTCAGGAATGCAAACAGGAAGTTCAAATAATGAAATGACAATGACA
ATGTTAGATCCTCGATAG

Peptide Sequence

PEP ID

Solyc04g077270.3.1
PEP Infomation

Serine/threonine-protein kinase (AHRD V3.3 *** M1A1I5_SOLTU)
Sequence

MESKWFILFLLSFYCFIQKISSATTNVINTNQFVIDGETIVSSGGTFELGFFSPNGSTTR
YIGIWYKQILPYVQTIVWVANREKPLTNTSSVVLKVNKPGILALLDEKNETIWSTNTSRS
VQNPVAVLLDSGNLVVKDANDDNPENFLWQSFNFPTDTLLPDMKLGKNFKSGVEAYLLAW
KNDNDPTPGEYTLLIDPTGYPQGVIRRGARVSARAGPWNGLRWSGAPAPLQTQSSIYTFQ
FVFNEEEVYYSFSLINNSVLTRLVLTNNGYIQRLTWVDRTKSWHLYLNIPLDTCDTYSLC
GAYGSCVIDSSPVCGCLDKFEPKYQQNWQTGDWSQGCVRKTSIDCNKEHGFVKYSGIKLP
DTNNSWYNKTMTLEGCRQVCSTNCSCIAYSSLDISNGDKGCLFWSGELIDIRELSGRGQD
IYIRMDSSDLVSYINSKKLIKKMVVVSQASSNRNKTGILAVSFSVLVAMILLGLILFMYI
RKKRKLKLKEDFELPQFQLSIITRATDNFSVNNQIGEGGYGPVYKGVLEEGQEIAVKRLS
RTSMQGIDEFKNEVTYIAKLQHRNLVRLLGCCIQGEEKMLIYEYMPNKSLDSYIFDQTKK
KLLDWSRRFDIINGIARGLLYLHQDSRLRIIHRDLKASNVLLDTEMNPKISDFGMARSVA
GNDMGAKTCHVVGTHGYMSPEYAVDGIFSVKSDVFSFGVLVLEIVSGKRNRGFVHQNHNL
NLLGHAWKLYKEDRSLELIDEKIAESCHISQVLRSIQVGLLCVQQCPEDRPNMSSVVQML
GNESLLAEAKEPGFFMERTVHDSDNSGMQTGSSNNEMTMTMLDPR*

Transcript Sequence

Transcript ID

Solyc04g077270.3.1
Transcript Infomation

Serine/threonine-protein kinase (AHRD V3.3 *** M1A1I5_SOLTU)
Sequence

CACAGCGCAAAGGAGATTAAACCACGCCGACACCATTGATTAGTTCAAGCAATTATAATA
GGTTGTCAATGCGGGCTGTCTCTTTGTTTATTTTTTTTAAAAAAAAATTGTTTGCGCAAG
GACTACGAAACTTAGCAACGTCACACATTCTACCGTGTAGTACAGAGCACGTATGGGCCA
GTCAATAGCTAGTTGCATAATGCAACAAAACTTTGTGACCAAAAGTCAGGCCATGGTGGC
TTAGCTTTGTGAGTTGTGAGGACTAAGGAATACTTCCAAATTTAGGCAAAGATGTCTTAT
TACTCATGTCACATCACGATTAAGAAATTTCCCTCTTCTTTCCGTCAACAAGAGGCACTA
AGAAACTTCACATAAAAAGTTTTATGTAAATATCAAAAGGAATAATATATAGGGGACCAA
ATTTTGAAAGGGGCTTAAGCATCAAACACATTGATGGAATCTAAATGGTTCATACTTTTC
TTATTGTCTTTCTACTGTTTTATACAGAAGATTAGTTCTGCTACGACAAATGTAATCAAT
ACTAATCAGTTCGTAATAGATGGTGAAACTATTGTTTCATCTGGTGGAACGTTTGAGCTG
GGATTTTTCAGCCCGAATGGTTCCACAACGCGATATATTGGGATATGGTACAAGCAAATT
CTACCTTATGTGCAAACCATTGTATGGGTTGCAAACAGAGAGAAACCACTCACCAATACA
TCTTCAGTCGTTTTGAAGGTCAACAAGCCGGGAATACTTGCTCTTCTTGATGAAAAAAAT
GAAACTATATGGTCCACGAACACCTCACGATCAGTCCAGAATCCAGTTGCAGTGCTGTTG
GATTCTGGTAATCTTGTTGTGAAAGATGCAAATGATGACAATCCAGAAAATTTCCTATGG
CAGAGTTTCAATTTTCCAACGGATACTCTCTTGCCTGATATGAAACTCGGAAAGAATTTT
AAGAGTGGTGTTGAAGCATACCTTTTAGCATGGAAGAACGATAACGATCCAACTCCAGGG
GAATACACTCTCCTCATTGATCCTACTGGATATCCACAAGGCGTCATTAGACGTGGAGCA
AGGGTATCAGCTCGAGCAGGACCATGGAATGGTTTACGGTGGAGTGGAGCACCTGCACCA
CTACAAACACAAAGCAGCATATATACATTTCAATTTGTTTTCAATGAAGAGGAGGTTTAC
TATAGTTTTTCTCTCATTAACAACTCGGTGTTAACAAGGCTAGTCCTGACTAACAATGGT
TATATACAACGTTTGACGTGGGTGGATAGGACAAAGAGTTGGCATCTTTACCTCAATATT
CCTCTGGATACTTGTGATACATATAGCTTATGTGGTGCCTATGGAAGCTGTGTCATAGAT
AGTTCTCCTGTTTGTGGATGTTTGGACAAGTTTGAACCTAAATATCAACAAAATTGGCAA
ACGGGAGATTGGTCACAAGGGTGTGTAAGGAAGACATCTATCGATTGCAACAAGGAACAT
GGATTTGTAAAATATTCTGGAATCAAGTTGCCAGATACTAACAACTCTTGGTACAATAAG
ACCATGACACTCGAAGGATGTAGGCAAGTATGCTCAACAAACTGTTCTTGCATAGCATAT
TCGAGCCTAGATATAAGCAATGGAGATAAAGGTTGCTTGTTTTGGTCTGGTGAGTTGATT
GATATCAGAGAGCTCTCTGGAAGAGGTCAAGACATTTACATACGAATGGATTCTTCAGAC
CTAGTGTCCTATATCAATTCGAAGAAGCTAATTAAGAAAATGGTTGTAGTTTCTCAGGCA
AGTTCAAACAGAAATAAGACAGGGATACTCGCGGTGAGTTTCTCAGTTTTGGTGGCAATG
ATTCTGCTAGGCCTGATTCTGTTTATGTACATACGTAAAAAGAGGAAACTAAAACTCAAA
GAGGATTTTGAGTTGCCACAGTTTCAACTGTCGATAATAACAAGAGCCACAGATAACTTT
TCGGTCAACAATCAGATTGGAGAAGGTGGATATGGACCTGTTTATAAGGGAGTACTCGAA
GAGGGACAAGAAATTGCTGTGAAGAGACTATCAAGGACTTCCATGCAAGGAATTGATGAA
TTCAAGAACGAAGTTACCTATATTGCCAAGCTTCAGCATAGAAATCTTGTGAGACTTTTA
GGCTGCTGCATTCAAGGGGAAGAAAAGATGTTGATCTACGAATACATGCCTAATAAAAGC
CTGGACTCATACATATTTGATCAAACAAAGAAAAAGTTACTTGATTGGTCAAGGCGTTTC
GACATTATTAATGGAATTGCTCGTGGCTTATTGTATCTCCATCAGGATTCTAGACTACGT
ATTATCCATAGAGACCTTAAAGCAAGCAATGTTTTGTTAGATACAGAAATGAATCCAAAG
ATATCAGACTTTGGCATGGCTCGAAGTGTTGCAGGAAACGACATGGGAGCAAAAACATGC
CATGTCGTTGGGACACACGGTTACATGTCCCCTGAATATGCAGTAGATGGCATCTTCTCG
GTAAAATCAGATGTGTTTAGCTTTGGCGTATTGGTGTTAGAGATAGTGAGTGGCAAGAGA
AATAGAGGATTCGTCCATCAAAATCACAACCTTAACCTTCTCGGTCACGCATGGAAGCTT
TACAAGGAAGATAGATCCTTGGAACTAATTGATGAGAAGATAGCTGAATCTTGCCATATT
TCTCAAGTTTTAAGGTCAATTCAAGTGGGACTATTATGTGTTCAACAATGTCCTGAAGAT
AGACCAAACATGTCTTCTGTGGTTCAAATGCTAGGTAATGAGAGTTTATTGGCAGAAGCT
AAAGAACCAGGATTTTTCATGGAAAGAACAGTACATGATTCAGATAACTCAGGAATGCAA
ACAGGAAGTTCAAATAATGAAATGACAATGACAATGTTAGATCCTCGATAGAAATTGATC
TTTCCACGATAAAGTGAAATATCAATTATTTTTTGATGACGACATTGAAGCGCTCGAGCA
TCACCTCAGGGACTATTAAGCGTGCCTTTTGAGTATTTAGAAAAATGGTTCATAAATCAT
AATTGACATGCTATTATAAGCAGTTATGCGATCTTGACTCTTTTTTTGCATTTGTTGTGA
GATATACAACTGGATTTTCATTTGTATCTTATCTTAGAAAGAAATGTAAATTCTAGTAAG
CAAAATTATATAGCCT