Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc04g077000.3.1
CDS Infomation	RING/U-box superfamily protein, putative (AHRD V3.3 *** A0A061GE38_THECC)
Sequence	ATGGATTTTCCGGATAACCGATTCTCCGGCCTAATTCCGGCGACGTTTAGTGCCGTTGTT AACTCGTCATGTCCACTTTTAGGCTTCATCGGTCGACTTTCTCCGGTTACCGGTGCAGCA TCTGCCGCCGCGATTATAATCGTGACCGTCGCTCTACCGGGGCTCCTTTACTTGAAAAAT AACAAAAATAAAATTCCTGATGAACGGCATAATAACCGTGGCGAGTCGACGCACGCTCCG ACGTTTGACCCTCTTCTGAATGAATTTGTTGAAGGACGTATAAGTGAGATAGATGTCTAT TTTGATGCTGAATATGCAGAAGAGTTACAAATTCATGAAGCTTTAGTAGCCTCACTTTAC ACTGGTCAAAGCAGTAATCATGCATCTGTATCTGCTCAAGGACTTTTGTCTGAAACAGAG ATGTTGAATCTTGAAAAAGAAGGTGAAGATCAACTTAACAACTTCTGTGAGATTTGCTTG GATGACAAAGAAGGATGGGAGATGTTTAAAAATGACACTTGTTCTCATTCCTTCTGTTAC GAGTGCACTGGCAAGCATATTATGGCAAGGATATCAGAGAAAGCAAAAGTAATTGGTTGC CCTGCAGTAAGTTGTGGTGCTGCTTTTGATGTTAATGCTTGTAGGTTCTTGATTCCTGAA GATGCACGGATCCAGTGGGATGAATCGGTATGTCAGTCAATGATTCTCGACTCTCAAAAA CTTTACTGCCCTTTCCGTGATTGCTCAGCCCTGTTGATAAATGATTCTGGGGCAACTATA GAAAGGAACAGATGCCCTTTGTGCAAGAGATCATTCTGTGCAGTATGTCGAGTTCCATGG CATTCAGAATTTACATGCAAAGAATTCCAGAAACTGAATGCCAAAAAGGGGGGCAAGGGG GAAGAAATGGTGAAGATACTTGCCAAGAAGAAAAACTGGCAGAAATGTCCTAATTGTAAA GTATATGTTGAGAAGACAGAGGGATGCATTCACATGACTTGCCGGTGTGAACATGAGTTC TGCTACAGATGTGGTGCAAAATGGACTCTTTCTCATCATTGCCGTAAAAAATGA

Peptide Sequence

PEP ID	Solyc04g077000.3.1
PEP Infomation	RING/U-box superfamily protein, putative (AHRD V3.3 *** A0A061GE38_THECC)
Sequence	MDFPDNRFSGLIPATFSAVVNSSCPLLGFIGRLSPVTGAASAAAIIIVTVALPGLLYLKN NKNKIPDERHNNRGESTHAPTFDPLLNEFVEGRISEIDVYFDAEYAEELQIHEALVASLY TGQSSNHASVSAQGLLSETEMLNLEKEGEDQLNNFCEICLDDKEGWEMFKNDTCSHSFCY ECTGKHIMARISEKAKVIGCPAVSCGAAFDVNACRFLIPEDARIQWDESVCQSMILDSQK LYCPFRDCSALLINDSGATIERNRCPLCKRSFCAVCRVPWHSEFTCKEFQKLNAKKGGKG EEMVKILAKKKNWQKCPNCKVYVEKTEGCIHMTCRCEHEFCYRCGAKWTLSHHCRKK*

Transcript Sequence

Transcript ID	Solyc04g077000.3.1
Transcript Infomation	RING/U-box superfamily protein, putative (AHRD V3.3 *** A0A061GE38_THECC)
Sequence	AGCATCACCACCACTACAATCGGAGTTCCATTCATCATATTCCTCAACAAATTTTACTTT CAGTAAAACTCTTTATTTTTTGATGGATTTTCCGGATAACCGATTCTCCGGCCTAATTCC GGCGACGTTTAGTGCCGTTGTTAACTCGTCATGTCCACTTTTAGGCTTCATCGGTCGACT TTCTCCGGTTACCGGTGCAGCATCTGCCGCCGCGATTATAATCGTGACCGTCGCTCTACC GGGGCTCCTTTACTTGAAAAATAACAAAAATAAAATTCCTGATGAACGGCATAATAACCG TGGCGAGTCGACGCACGCTCCGACGTTTGACCCTCTTCTGAATGAATTTGTTGAAGGACG TATAAGTGAGATAGATGTCTATTTTGATGCTGAATATGCAGAAGAGTTACAAATTCATGA AGCTTTAGTAGCCTCACTTTACACTGGTCAAAGCAGTAATCATGCATCTGTATCTGCTCA AGGACTTTTGTCTGAAACAGAGATGTTGAATCTTGAAAAAGAAGGTGAAGATCAACTTAA CAACTTCTGTGAGATTTGCTTGGATGACAAAGAAGGATGGGAGATGTTTAAAAATGACAC TTGTTCTCATTCCTTCTGTTACGAGTGCACTGGCAAGCATATTATGGCAAGGATATCAGA GAAAGCAAAAGTAATTGGTTGCCCTGCAGTAAGTTGTGGTGCTGCTTTTGATGTTAATGC TTGTAGGTTCTTGATTCCTGAAGATGCACGGATCCAGTGGGATGAATCGGTATGTCAGTC AATGATTCTCGACTCTCAAAAACTTTACTGCCCTTTCCGTGATTGCTCAGCCCTGTTGAT AAATGATTCTGGGGCAACTATAGAAAGGAACAGATGCCCTTTGTGCAAGAGATCATTCTG TGCAGTATGTCGAGTTCCATGGCATTCAGAATTTACATGCAAAGAATTCCAGAAACTGAA TGCCAAAAAGGGGGGCAAGGGGGAAGAAATGGTGAAGATACTTGCCAAGAAGAAAAACTG GCAGAAATGTCCTAATTGTAAAGTATATGTTGAGAAGACAGAGGGATGCATTCACATGAC TTGCCGGTGTGAACATGAGTTCTGCTACAGATGTGGTGCAAAATGGACTCTTTCTCATCA TTGCCGTAAAAAATGATGTTATGTTTAAAGCTCCATAAGATTTCTCCGGGAAGTGATAAT ATTGATTATACTTCCTCTAGGGTCAGTTTAGCTAATAGCAATATTTAGGTTGTTGAATCT TTTGGAAGGAAACAGTACATAACAATCTGGATTTTTATCTTTTGTCCATGATAACTGGTA AGTACTAACTAGCAGTGTTGAGTAATATAATAGCTTTTGCTTTATGTACAATTTTCTGAA GAAAAAATCATGCATGTAAGACTCTTTCTTGTCTTACCATGGGTAACAGAGGACATAGTA AGTTTTCTTTTCTTCAAACTGTTAACGAAAA