Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc04g076860.3.1
CDS Infomation	Zinc finger (C3HC4-type RING finger) family protein (AHRD V3.3 *** AT5G49665.1)
Sequence	ATGGGGACAGGATGGAGGAGAGCTTTTTGTACAACAATCCCAAGAGATAGAGAACCTCAT TTTGTGGATAAAGATTCACAACAAGTGAACAACAATGGCGGTGGACAACAAGTCCCAAGT CCAAGTCCAAGAAGCTGTGTAAAGCTTGGTTTTTTATCTAGTAGTAATCCTTCTACTCCT CGTTTGCGATGCAAAACTAATAATAAAGCTTCTTCTAATGACATTAACACTCTTATTAGT CCTAAACTCCATTGCAAAACTACTCCTAAATCCAACACGAAAAGCCCTAAAACTTTACTT GGTTCTAATCCTTCTTCTCCAAGATCCCCTTTTTCTATCCTCAAGAACACCCTACGTCTC TCCAAACATAGCTGTGGAGTTTGTACACAGAGTGTGAAATCAGGGCAAGGAATGGCTATA TATACAGCAGAATGTTCTCATACTTTTCATTTTCCTTGCATTGCTTCTCATGTTAAAAAA CAGAGCAATTTGGTTTGCCCTGTTTGTAATTCAACATGGAAAGATGTACCCCTTTTAGCC ATTCACAGACTTCAACAACAAGAAAATCAAAAAACCCAAAAACCAGAAGAAGTAGAATCA TATCCAAGTACCCCAATCAGAAAACAAGAAAAGCCATTACCAAATGTCAAAACTTATTAC AAACCAGAGCAGTGTGGTTATAATGATGATGAGCCTCTTTTTACTCCTACTGCTGGAGCT AAATTTGTTTCGATACCGGAAGCAAATGAGGAACAAGATGATGTAGAAGAAGAAATCGAA GAATTCCAGGGGTTTTTCGTGAACCCGATTTCGAGTGATGAAGCATTTGCTAACCAGAGA GATAATAGAAGTGTTGAAGTTAGCTTAATGCCTGAAGCTGCCATTGTTTCCGTTGGAAGA ACTCATGAGACGTATGCTGTTGTTCTGAAAGTTAAAGCTCCACCACCTCCGCCGTCGCCT CCGGCGGGGAATTCGAATTCTGGGTCGGGTCATTTTCTTGACCCGGCACGACGTGCTCCG ATTGATTTGGTTACTGTATTGGATGTGAGTGGGAGTATGAGTGGTGCAAAGATTCAAATG TTGAAACGAGCCATGAGGTTGGTTATTTCCTCTCTCGGCTCTGTTGATCGGCTTTCAATT GTGGCTTTCTCTGCTACACCAAAAAGATTACTTCCTCTGAGAAGAATGACTCAACAAGGA CAACGATCGGCTCGGCGCATTATTGATCGGCTTGTTTGTAGCCAAGGGACTTGTGTTGGG GAAGCTTTAAGGAAAGCCGCGAAGGTGCTTGAAGATCGGCGCGAGAGAAATCCAGTGGCT AGCATTATGCTTTTATCCGACGGTCAGGATGAGAAGATCCAGGGAAGTAATACACACAAT CAACGATCGGAATCCACCCACGTGTCCTCCACCCGGTTTGGTCACATAGAAATTCCGGTT CATTCCTCCGGGTTCGGGAAAAAAGGCGGCTTAAGCCATGAGCCGGCTGAGGAGGACGCG TTTTCGAAATGCGTTGGCGGTTTATTAAGTGTAGTGGTTCAAGATCTGAAACTCCAGCTG GATTTCTCATCCGGCTCAGACCCGGCTGAAGTTGCAGCTGTTTATTCGTACAATGGTCGG CCAGCTGTACTCGGGTCGAGTTGTGTTCGGCTTGGCGATTTATACGCCGAGGAAGAAAGG GAATTGCTATTAGAAGTGAAAATCCCAACAATGACTAATGGGTCACACCATGTGTTATCC GTTAGATGTTGCTACAAGGACCCGGCAACACAAGAAGCAATTTATGGAAGGGAACATTCT TTATTGGTTCCAAGGCCTCAAGCCGTTCGATCTTCAATCCCGAAAATTGAACGACTCAGG AACCTCTTTATAACTACGAGGGCAATTGCGGAGTCTAGGAGATTAATCGAGCATAACGAG CTATCTAGCGCGATGCATTTATTGTCATCGGCTCGAGCATTGTTGATACAATCCGGGTCG GCTTTTGTGGACGAGTATGTAAGAGGATTAGAAGCCGAGCTGACGGAAGTGCAATGGAGG AAACAATATCAACAGCAGATAGAGCAGCATAAAATGATCCAACGGCAGAGAACGAATGAG AGGGAAATGAATTTATTCTTGGATGAAAATGGTGAGCCGTTAACGCCTACATCGGCTTGG AGAGCAGCTGAGAAGCTAGCTAAAGTGGCTATGATGAAGAAGTCGATGAATAGAGTGAGT GATTTGCACGGCTTTGAAAATGCTAGATTTTAA

Peptide Sequence

PEP ID	Solyc04g076860.3.1
PEP Infomation	Zinc finger (C3HC4-type RING finger) family protein (AHRD V3.3 *** AT5G49665.1)
Sequence	MGTGWRRAFCTTIPRDREPHFVDKDSQQVNNNGGGQQVPSPSPRSCVKLGFLSSSNPSTP RLRCKTNNKASSNDINTLISPKLHCKTTPKSNTKSPKTLLGSNPSSPRSPFSILKNTLRL SKHSCGVCTQSVKSGQGMAIYTAECSHTFHFPCIASHVKKQSNLVCPVCNSTWKDVPLLA IHRLQQQENQKTQKPEEVESYPSTPIRKQEKPLPNVKTYYKPEQCGYNDDEPLFTPTAGA KFVSIPEANEEQDDVEEEIEEFQGFFVNPISSDEAFANQRDNRSVEVSLMPEAAIVSVGR THETYAVVLKVKAPPPPPSPPAGNSNSGSGHFLDPARRAPIDLVTVLDVSGSMSGAKIQM LKRAMRLVISSLGSVDRLSIVAFSATPKRLLPLRRMTQQGQRSARRIIDRLVCSQGTCVG EALRKAAKVLEDRRERNPVASIMLLSDGQDEKIQGSNTHNQRSESTHVSSTRFGHIEIPV HSSGFGKKGGLSHEPAEEDAFSKCVGGLLSVVVQDLKLQLDFSSGSDPAEVAAVYSYNGR PAVLGSSCVRLGDLYAEEERELLLEVKIPTMTNGSHHVLSVRCCYKDPATQEAIYGREHS LLVPRPQAVRSSIPKIERLRNLFITTRAIAESRRLIEHNELSSAMHLLSSARALLIQSGS AFVDEYVRGLEAELTEVQWRKQYQQQIEQHKMIQRQRTNEREMNLFLDENGEPLTPTSAW RAAEKLAKVAMMKKSMNRVSDLHGFENARF*

Transcript Sequence

Transcript ID	Solyc04g076860.3.1
Transcript Infomation	Zinc finger (C3HC4-type RING finger) family protein (AHRD V3.3 *** AT5G49665.1)
Sequence	CTTATAATATACTTGTGTATATATATTTATTGAATGAATAAACAAGCCTACTCAAAAAAC TCCCTCATATGACACAAAACACAGAGTGCAATAGAAAGAAGAAACAGATCTCAAATACTT TATAGATGCAGCTATCTTTTTGTGTCTTAATAGCAGCAAAAAATTAAATTCAGAGAAGAA AAAAAAAGGCTCTGACTATAACTCTGAGCTGAGATTTCTCTATCTTTATACTTTCTTTTG TTTCTATCCTTTTCTTCTTCTTCTTCTTCTTCAACTTGTTTGTCAACTTTGTTTAGATCC ATTTGAATTCTTTTGAGAAATGGGGACAGGATGGAGGAGAGCTTTTTGTACAACAATCCC AAGAGATAGAGAACCTCATTTTGTGGATAAAGATTCACAACAAGTGAACAACAATGGCGG TGGACAACAAGTCCCAAGTCCAAGTCCAAGAAGCTGTGTAAAGCTTGGTTTTTTATCTAG TAGTAATCCTTCTACTCCTCGTTTGCGATGCAAAACTAATAATAAAGCTTCTTCTAATGA CATTAACACTCTTATTAGTCCTAAACTCCATTGCAAAACTACTCCTAAATCCAACACGAA AAGCCCTAAAACTTTACTTGGTTCTAATCCTTCTTCTCCAAGATCCCCTTTTTCTATCCT CAAGAACACCCTACGTCTCTCCAAACATAGCTGTGGAGTTTGTACACAGAGTGTGAAATC AGGGCAAGGAATGGCTATATATACAGCAGAATGTTCTCATACTTTTCATTTTCCTTGCAT TGCTTCTCATGTTAAAAAACAGAGCAATTTGGTTTGCCCTGTTTGTAATTCAACATGGAA AGATGTACCCCTTTTAGCCATTCACAGACTTCAACAACAAGAAAATCAAAAAACCCAAAA ACCAGAAGAAGTAGAATCATATCCAAGTACCCCAATCAGAAAACAAGAAAAGCCATTACC AAATGTCAAAACTTATTACAAACCAGAGCAGTGTGGTTATAATGATGATGAGCCTCTTTT TACTCCTACTGCTGGAGCTAAATTTGTTTCGATACCGGAAGCAAATGAGGAACAAGATGA TGTAGAAGAAGAAATCGAAGAATTCCAGGGGTTTTTCGTGAACCCGATTTCGAGTGATGA AGCATTTGCTAACCAGAGAGATAATAGAAGTGTTGAAGTTAGCTTAATGCCTGAAGCTGC CATTGTTTCCGTTGGAAGAACTCATGAGACGTATGCTGTTGTTCTGAAAGTTAAAGCTCC ACCACCTCCGCCGTCGCCTCCGGCGGGGAATTCGAATTCTGGGTCGGGTCATTTTCTTGA CCCGGCACGACGTGCTCCGATTGATTTGGTTACTGTATTGGATGTGAGTGGGAGTATGAG TGGTGCAAAGATTCAAATGTTGAAACGAGCCATGAGGTTGGTTATTTCCTCTCTCGGCTC TGTTGATCGGCTTTCAATTGTGGCTTTCTCTGCTACACCAAAAAGATTACTTCCTCTGAG AAGAATGACTCAACAAGGACAACGATCGGCTCGGCGCATTATTGATCGGCTTGTTTGTAG CCAAGGGACTTGTGTTGGGGAAGCTTTAAGGAAAGCCGCGAAGGTGCTTGAAGATCGGCG CGAGAGAAATCCAGTGGCTAGCATTATGCTTTTATCCGACGGTCAGGATGAGAAGATCCA GGGAAGTAATACACACAATCAACGATCGGAATCCACCCACGTGTCCTCCACCCGGTTTGG TCACATAGAAATTCCGGTTCATTCCTCCGGGTTCGGGAAAAAAGGCGGCTTAAGCCATGA GCCGGCTGAGGAGGACGCGTTTTCGAAATGCGTTGGCGGTTTATTAAGTGTAGTGGTTCA AGATCTGAAACTCCAGCTGGATTTCTCATCCGGCTCAGACCCGGCTGAAGTTGCAGCTGT TTATTCGTACAATGGTCGGCCAGCTGTACTCGGGTCGAGTTGTGTTCGGCTTGGCGATTT ATACGCCGAGGAAGAAAGGGAATTGCTATTAGAAGTGAAAATCCCAACAATGACTAATGG GTCACACCATGTGTTATCCGTTAGATGTTGCTACAAGGACCCGGCAACACAAGAAGCAAT TTATGGAAGGGAACATTCTTTATTGGTTCCAAGGCCTCAAGCCGTTCGATCTTCAATCCC GAAAATTGAACGACTCAGGAACCTCTTTATAACTACGAGGGCAATTGCGGAGTCTAGGAG ATTAATCGAGCATAACGAGCTATCTAGCGCGATGCATTTATTGTCATCGGCTCGAGCATT GTTGATACAATCCGGGTCGGCTTTTGTGGACGAGTATGTAAGAGGATTAGAAGCCGAGCT GACGGAAGTGCAATGGAGGAAACAATATCAACAGCAGATAGAGCAGCATAAAATGATCCA ACGGCAGAGAACGAATGAGAGGGAAATGAATTTATTCTTGGATGAAAATGGTGAGCCGTT AACGCCTACATCGGCTTGGAGAGCAGCTGAGAAGCTAGCTAAAGTGGCTATGATGAAGAA GTCGATGAATAGAGTGAGTGATTTGCACGGCTTTGAAAATGCTAGATTTTAAATAATTGT AATAAATTTGGTTAGGTTTTAAAGGAAGGCAAACAACTGGGGGAAGCGGCCCAATGGGCC ATGCATATAACAGCGACTGTTGATCCAGACGGTCCGGCCCTTTCTGCAGTAGAGGCCCAC TTAGGATTGATTGGTTTATTGGGCCCGTAGCTTTTGTCTAGTATTCTAGTTTTTATTTTT ATTTTCAATATTATTCGACTGAAACTTTACTTTAAAAAAAAAAAAATTAGAGATTTTGCT TTTGCCTTTTGTATTGAACAACGTTAGAGGACAATGTAAATGCAATTCTCAATTGGAATA TTTAATTCTCATGCATCTT