Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g076790.3.1
CDS Infomation

Serine hydroxymethyltransferase (AHRD V3.3 *** M1A7K0_SOLTU)
Sequence

ATGGCGATGGCTCTTCGTAAGATTTCTTACGGTTCCTCCATCAACCTTCTTCGTCCTCTC
TCCAATGGCTCTTCCGTGCAATACAAGTCGTCTTTGCCTAATCAAGCAGTTCGAGATAGG
GAGGATCCGCGAGTTACGTGGATTAAGCAGTTGAATGCGCCACTTGAAGAAATTGATCCA
GAGATTGCCGACATTATTGAGCATGAGAAAGCTAGGCAATGGAAGGGTCTTGAGCTTATC
CCTTCAGAGAATTTTACATCACTGTCAGTGATGCAAGCAGTTGGATCAGTAATGACCAAC
AAATACAGTGAAGGGTATCCTGGTGCTAGATACTATGGAGGAAATGAGTATATTGACATG
GCAGAGAGATTGTGTCAAAAACGTGCACTGGAAGTTTTTAATTTGGATCCTGCCAAATGG
GGAGTCAATGTTCAGTCATTGTCTGGATCTCCTTCAAATTTTCAAGTGTACACTGCTTTA
TTAAAGCCTCATGAGAGAATTATGGCGCTAGATCTTCCTCATGGTGGACATCTTTCACAT
GGTTATCAGACTGACACAAAGAAGATTTCTGCTGTGTCTATCTTTTTCGAGACCATGCCT
TACAGATTAGATGAGAGCACAGGTTATATTGACTATGAACAGCTGGAGAAAAGTGCAACG
CTCTTCCGACCGAAGTTGATTGTTGCTGGTGCAAGTGCTTATGCTCGCCTATATGATTAT
GCACGTATCCGTAAGGTATGTGACAAGCAAAAAGCTGTTCTCTTGGCAGACATGGCACAT
ATCAGTGGCTTGGTTGCTGCTGGAGTCATCCCTTCTCCTTTTGAGTATGCAGACGTTGTT
ACCACCACAACTCACAAGTCACTACGTGGGCCACGTGGAGCGATGATCTTCTTCAGAAAA
GGAGTGAAGGAGATAAACAAAAAAGGAGAAGAAGTTATGTATGACTATGAAGATAAAATC
AACCAAGCTGTTTTCCCTGGACTTCAAGGTGGCCCCCACAATCACACAATTTCTGGCTTA
GCTGTCGCACTGAAACAAGTCATGACACCAGAATACAAGGCATACCAAGAGCAAGTTCTT
AGCAATTGCTCTAAGTTTGCTGAGAGTTTGCTGGCAGCGGGATATGATCTTGTATCTGGT
GGAACTGAGAATCATCTCGTGCTGGTTAACTTAAGAAATAAGGGTATTGATGGATCTAGA
GTTGAGAAGGTTTTAGAGTCGGTGCATATTGCAGCCAATAAGAATACTGTGCCTGGTGAT
GTATCTGCCATGGTACCTGGTGGCATTCGCATGGGCACCCCAGCTCTCACTTCTAGAGGT
TTTGTTGAGGAGGATTTTGTCAAAGTGGCTGAATATTTTGACGCTGCTGTGAAGTTGGCC
CTTAAGGTCAAGGCTGAGACCAAAGGAACGAAGTTGAAGGACTTTGTGGCAACTTTGAGT
TCAGACTCCAACATTCAATCTGAGGTTGCCAAGCTAAGGCAGGACGTTGAGGACTATGCC
AAACAATTCCCTACTGTTGGTTTCGAGAAAGAAACAATGAAATACAAGAATTGA

Peptide Sequence

PEP ID

Solyc04g076790.3.1
PEP Infomation

Serine hydroxymethyltransferase (AHRD V3.3 *** M1A7K0_SOLTU)
Sequence

MAMALRKISYGSSINLLRPLSNGSSVQYKSSLPNQAVRDREDPRVTWIKQLNAPLEEIDP
EIADIIEHEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDM
AERLCQKRALEVFNLDPAKWGVNVQSLSGSPSNFQVYTALLKPHERIMALDLPHGGHLSH
GYQTDTKKISAVSIFFETMPYRLDESTGYIDYEQLEKSATLFRPKLIVAGASAYARLYDY
ARIRKVCDKQKAVLLADMAHISGLVAAGVIPSPFEYADVVTTTTHKSLRGPRGAMIFFRK
GVKEINKKGEEVMYDYEDKINQAVFPGLQGGPHNHTISGLAVALKQVMTPEYKAYQEQVL
SNCSKFAESLLAAGYDLVSGGTENHLVLVNLRNKGIDGSRVEKVLESVHIAANKNTVPGD
VSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDAAVKLALKVKAETKGTKLKDFVATLS
SDSNIQSEVAKLRQDVEDYAKQFPTVGFEKETMKYKN*

Transcript Sequence

Transcript ID

Solyc04g076790.3.1
Transcript Infomation

Serine hydroxymethyltransferase (AHRD V3.3 *** M1A7K0_SOLTU)
Sequence

AAATAACACGTAACTGAACTTCTAAATGAAAGTGTTACTAGTATTTTAGTGCTTTACAAC
AACCAAAAATTAAAAAGTCACATCGTTCAATTAGCAAAGCAAACGCACCACACCACTAAG
CTCTGTCACCATCTTCAACCACCCTCTGTTTCCCCAAATTCCCAACAAGGGGCCTAATAA
CACCAACCCAAAGCTCATTTCTCAATTGCCATTACACGAACAAAAATTGAAATAGCAATG
GCGATGGCTCTTCGTAAGATTTCTTACGGTTCCTCCATCAACCTTCTTCGTCCTCTCTCC
AATGGCTCTTCCGTGCAATACAAGTCGTCTTTGCCTAATCAAGCAGTTCGAGATAGGGAG
GATCCGCGAGTTACGTGGATTAAGCAGTTGAATGCGCCACTTGAAGAAATTGATCCAGAG
ATTGCCGACATTATTGAGCATGAGAAAGCTAGGCAATGGAAGGGTCTTGAGCTTATCCCT
TCAGAGAATTTTACATCACTGTCAGTGATGCAAGCAGTTGGATCAGTAATGACCAACAAA
TACAGTGAAGGGTATCCTGGTGCTAGATACTATGGAGGAAATGAGTATATTGACATGGCA
GAGAGATTGTGTCAAAAACGTGCACTGGAAGTTTTTAATTTGGATCCTGCCAAATGGGGA
GTCAATGTTCAGTCATTGTCTGGATCTCCTTCAAATTTTCAAGTGTACACTGCTTTATTA
AAGCCTCATGAGAGAATTATGGCGCTAGATCTTCCTCATGGTGGACATCTTTCACATGGT
TATCAGACTGACACAAAGAAGATTTCTGCTGTGTCTATCTTTTTCGAGACCATGCCTTAC
AGATTAGATGAGAGCACAGGTTATATTGACTATGAACAGCTGGAGAAAAGTGCAACGCTC
TTCCGACCGAAGTTGATTGTTGCTGGTGCAAGTGCTTATGCTCGCCTATATGATTATGCA
CGTATCCGTAAGGTATGTGACAAGCAAAAAGCTGTTCTCTTGGCAGACATGGCACATATC
AGTGGCTTGGTTGCTGCTGGAGTCATCCCTTCTCCTTTTGAGTATGCAGACGTTGTTACC
ACCACAACTCACAAGTCACTACGTGGGCCACGTGGAGCGATGATCTTCTTCAGAAAAGGA
GTGAAGGAGATAAACAAAAAAGGAGAAGAAGTTATGTATGACTATGAAGATAAAATCAAC
CAAGCTGTTTTCCCTGGACTTCAAGGTGGCCCCCACAATCACACAATTTCTGGCTTAGCT
GTCGCACTGAAACAAGTCATGACACCAGAATACAAGGCATACCAAGAGCAAGTTCTTAGC
AATTGCTCTAAGTTTGCTGAGAGTTTGCTGGCAGCGGGATATGATCTTGTATCTGGTGGA
ACTGAGAATCATCTCGTGCTGGTTAACTTAAGAAATAAGGGTATTGATGGATCTAGAGTT
GAGAAGGTTTTAGAGTCGGTGCATATTGCAGCCAATAAGAATACTGTGCCTGGTGATGTA
TCTGCCATGGTACCTGGTGGCATTCGCATGGGCACCCCAGCTCTCACTTCTAGAGGTTTT
GTTGAGGAGGATTTTGTCAAAGTGGCTGAATATTTTGACGCTGCTGTGAAGTTGGCCCTT
AAGGTCAAGGCTGAGACCAAAGGAACGAAGTTGAAGGACTTTGTGGCAACTTTGAGTTCA
GACTCCAACATTCAATCTGAGGTTGCCAAGCTAAGGCAGGACGTTGAGGACTATGCCAAA
CAATTCCCTACTGTTGGTTTCGAGAAAGAAACAATGAAATACAAGAATTGAGCTTGGATC
TAGTGTTGAGGCAGTGAGGCTTCCTTTTTCTTCACTCTCTGTAATTTTGCTGTCTTTGGC
TGCTCGAGTCAGAAGACATTTTTCTCCAATGATGTTAGAACATTTGTCTTTCTGAATTCA
CCTGCAGTGCGCGGAAAAGAGTTACACGGATCACATTTCATTACATTTGTTTGATTTTTC
AAATCGAAGTTACCATCAGATGTAATTTTATGCTACGTTCACATGTGATGTATAACAGGA
TAAGGGATAAGATCTTATGCAAACAGTTCATCAGTAATGCCAGCACTCTCACCAAACAAG
AATCAGGAACTATATATTTTATTTTTTCATATATGATCTTTGCAATTGATTATTTTTGAA
AGT