Plant GARDEN How To ▶︎

JA

EN

Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g076660.3.1

CDS Infomation

Rhamnogalacturonate lyase family protein (AHRD V3.3 *** AT1G09910.1)

Sequence

ATGGGTAATGGGCGTCGCTTCAAACGCATGATAAAATGCTTATTATGCGCGTGCGCTGGA
CAAACAGGAGGTTGTTGTCATAGTGGAGGCTCTGGAACAATGTCCCCAATTGGAGTGAGA
CTGTACATTCAGGATCGCCATGTGATGATGGATAATGGCCTAGTACAAGTCACGTTATCA
AATCCAGATGGAATTGTCACTGGAATACGCTATAATGACGTTGATAATCTACTTGAAGGC
CTTAACGATGAATCTAATAGAGGGTACTGGGACGTTGTCTGGAATTCTCCTGATGGTGGA
AAAACTGGAGTATTTGAAGTGATCAAGGGTACTAATTTCAAGGTTATAAAGGAGACAGAC
GATCAAGTAGAGATATCGTTTTCGCGACCATGGGATCCCTCCCTCCAAGGCAAACTTGTG
CCTCTGAATATTGACAAAAGGTTTATTTTGCTCCGTGGCTGCTCTGGTTTCTACTCTTAT
GCCATTTATGAGCATGTTGGTTCATCTGAGTGGCCTGCTTTCAGCATCGGTGAAACAAGA
ATAGCATTCAAGCTCCGGAAAGACAAGTTTCACTATATGGCTGTGGCAGACAATAAGCAA
AGATTCATGCCTCTACCAGATGACCGAATGCCTGCAAGATGCCAACGCCTTGCCTATGCA
GAAGCGGTCCTTCTGAATAATCCTGTGGAGCCAGAGTTAAGAGGAGAGGTCGATGACAAG
TACCAATATTCATGTGATAATAAAGACAACAAGGTCCACGGCTGGATATCTATGGATCCA
CCAGTGGGATTCTGGCAAATTACTCCAAGTGATGAATTTCGATCCGGTGGACCTGTCAAA
CAGAACCTCACATCTCATGTCGGTCCAACTACCTTAGCTATGTTTCTAAGCTCTCATTAC
GCTGGGGATGATCTAACACCAAATTTTGCTCAAGGTGAAGCCTGGAAGAAAGTTTTTGGC
CCCGTGTTTATATATCTCAATTCTGTTATGCCATGGGAAGATCCTGTTACTCTATGGGAT
GATGCCAAGATACAGATGCAGCGTGAAGTTCAAAGTTGGCCTTACAGTTTTCCAGTATCT
GAGGATTTTCCATCAGCAGATCAAAGAGGCAGTGTTAGCGGTAAACTTTTGGTTCAAGAC
AAGTACATTAGTGATGATCATATACCTGCAAATGGCGCTTATGTCGGCCTTGCTCCGCCA
GGAGAAGCTGGTTCCTGGCAAAAAGAATGCAAGGACTACCAATTTTGGGCTAAATCAGAC
AACAATGGAAACTTCTCCATAAACAATATATGTCCTGGTGACTACAAACTTTATGCATGG
GTACCTGGATTCATTGGGGACTATCTATATGAGACTCCTATTTCCATAACTCCAGGTTGT
AGTATTGATGTGGACGAAATCGTATATCAGCCTCCAAGAGATGGCCCAACATTATGGGAA
ATAGGCATTCCTGATCGTACTGCTGCTGAATTTTTTGTTCCTGAACCCAACCCGAAATTT
GTCAACAAGCTTTTCGTCAATCATCCCGACAGGTTTAGGCAATATGGATTGTGGGATAGG
TACTCCGAGCTATATCCAACGGATGATCTTGTGTATGTAACTGGAGAAAGTGACTATACC
AAAGACTGGTTTTTCGCTCAGGTTCCAAGGAGAAAAGAGGACGGCTCATATCAAGGAACG
ACATGGCAAATCAGATTTAAACTTGATTCAGTCAATCAAGGAGGCACGTATAAATTGCGT
ATTGCAATTGCATCTGCAACTTTAGCTGAAGTACAGGTTCGGGTGAATAATCCAAGCACA
AATCGACCTGTATTTTCAACCGGATTGATTGGAAGAGACAACTCAATTGCTAGACACGGA
ATTCACGGATTATATTGGCTATACAATATAGACATACAGGGAAATCTGTTAGTACAAGGG
GACAACACCATTTACTTAGGCCAACCAAGAAACCAAAGTCCTTTCCAGGGGATTATGTAT
GACTATATTCGTCTCGAAGCTCCACCAAACTAA

Peptide Sequence

PEP ID

Solyc04g076660.3.1

PEP Infomation

Rhamnogalacturonate lyase family protein (AHRD V3.3 *** AT1G09910.1)

Sequence

MGNGRRFKRMIKCLLCACAGQTGGCCHSGGSGTMSPIGVRLYIQDRHVMMDNGLVQVTLS
NPDGIVTGIRYNDVDNLLEGLNDESNRGYWDVVWNSPDGGKTGVFEVIKGTNFKVIKETD
DQVEISFSRPWDPSLQGKLVPLNIDKRFILLRGCSGFYSYAIYEHVGSSEWPAFSIGETR
IAFKLRKDKFHYMAVADNKQRFMPLPDDRMPARCQRLAYAEAVLLNNPVEPELRGEVDDK
YQYSCDNKDNKVHGWISMDPPVGFWQITPSDEFRSGGPVKQNLTSHVGPTTLAMFLSSHY
AGDDLTPNFAQGEAWKKVFGPVFIYLNSVMPWEDPVTLWDDAKIQMQREVQSWPYSFPVS
EDFPSADQRGSVSGKLLVQDKYISDDHIPANGAYVGLAPPGEAGSWQKECKDYQFWAKSD
NNGNFSINNICPGDYKLYAWVPGFIGDYLYETPISITPGCSIDVDEIVYQPPRDGPTLWE
IGIPDRTAAEFFVPEPNPKFVNKLFVNHPDRFRQYGLWDRYSELYPTDDLVYVTGESDYT
KDWFFAQVPRRKEDGSYQGTTWQIRFKLDSVNQGGTYKLRIAIASATLAEVQVRVNNPST
NRPVFSTGLIGRDNSIARHGIHGLYWLYNIDIQGNLLVQGDNTIYLGQPRNQSPFQGIMY
DYIRLEAPPN*

Transcript Sequence

Transcript ID

Solyc04g076660.3.1

Transcript Infomation

Rhamnogalacturonate lyase family protein (AHRD V3.3 *** AT1G09910.1)

Sequence

ATAATGAAATAGAAACTAAAAATGAACGATACGAGCATTATTAGGAGTTTTAATAAAAGT
TATTTTTACTTTTTGATAATCATATTCGTCGATACTTCAACAATGTAACATCACCTCATA
ATTAAGAGATTTGAGATAATAATTATAGAAATGGAAAATAAAAATGAAATTATGAATCCC
AATTCCCAAATGAAATTTGAAGTTCAAGCAGTAACAGTAACCAACTCCAAAACTGTCGTT
CAATATCGTCTTGTACCAAAAAAATTCCAAACCCATATAATATATGATTTTATTTGTTAA
ATCATGTGTTCAAGAACACACAAATTACCGATAAATCAGAGACACGCATAACTTGGTCGA
TGTGCGGGCGGCAATTGAGCAGATTGATTGACGGCAGAAGCGGTGTGATACGGCGGGAGT
TGGTGGCGCGTGGTTGAACGGGGAAAGTGCATATACAGTTACACAAATGGGTAATGGGCG
TCGCTTCAAACGCATGATAAAATGCTTATTATGCGCGTGCGCTGGACAAACAGGAGGTTG
TTGTCATAGTGGAGGCTCTGGAACAATGTCCCCAATTGGAGTGAGACTGTACATTCAGGA
TCGCCATGTGATGATGGATAATGGCCTAGTACAAGTCACGTTATCAAATCCAGATGGAAT
TGTCACTGGAATACGCTATAATGACGTTGATAATCTACTTGAAGGCCTTAACGATGAATC
TAATAGAGGGTACTGGGACGTTGTCTGGAATTCTCCTGATGGTGGAAAAACTGGAGTATT
TGAAGTGATCAAGGGTACTAATTTCAAGGTTATAAAGGAGACAGACGATCAAGTAGAGAT
ATCGTTTTCGCGACCATGGGATCCCTCCCTCCAAGGCAAACTTGTGCCTCTGAATATTGA
CAAAAGGTTTATTTTGCTCCGTGGCTGCTCTGGTTTCTACTCTTATGCCATTTATGAGCA
TGTTGGTTCATCTGAGTGGCCTGCTTTCAGCATCGGTGAAACAAGAATAGCATTCAAGCT
CCGGAAAGACAAGTTTCACTATATGGCTGTGGCAGACAATAAGCAAAGATTCATGCCTCT
ACCAGATGACCGAATGCCTGCAAGATGCCAACGCCTTGCCTATGCAGAAGCGGTCCTTCT
GAATAATCCTGTGGAGCCAGAGTTAAGAGGAGAGGTCGATGACAAGTACCAATATTCATG
TGATAATAAAGACAACAAGGTCCACGGCTGGATATCTATGGATCCACCAGTGGGATTCTG
GCAAATTACTCCAAGTGATGAATTTCGATCCGGTGGACCTGTCAAACAGAACCTCACATC
TCATGTCGGTCCAACTACCTTAGCTATGTTTCTAAGCTCTCATTACGCTGGGGATGATCT
AACACCAAATTTTGCTCAAGGTGAAGCCTGGAAGAAAGTTTTTGGCCCCGTGTTTATATA
TCTCAATTCTGTTATGCCATGGGAAGATCCTGTTACTCTATGGGATGATGCCAAGATACA
GATGCAGCGTGAAGTTCAAAGTTGGCCTTACAGTTTTCCAGTATCTGAGGATTTTCCATC
AGCAGATCAAAGAGGCAGTGTTAGCGGTAAACTTTTGGTTCAAGACAAGTACATTAGTGA
TGATCATATACCTGCAAATGGCGCTTATGTCGGCCTTGCTCCGCCAGGAGAAGCTGGTTC
CTGGCAAAAAGAATGCAAGGACTACCAATTTTGGGCTAAATCAGACAACAATGGAAACTT
CTCCATAAACAATATATGTCCTGGTGACTACAAACTTTATGCATGGGTACCTGGATTCAT
TGGGGACTATCTATATGAGACTCCTATTTCCATAACTCCAGGTTGTAGTATTGATGTGGA
CGAAATCGTATATCAGCCTCCAAGAGATGGCCCAACATTATGGGAAATAGGCATTCCTGA
TCGTACTGCTGCTGAATTTTTTGTTCCTGAACCCAACCCGAAATTTGTCAACAAGCTTTT
CGTCAATCATCCCGACAGGTTTAGGCAATATGGATTGTGGGATAGGTACTCCGAGCTATA
TCCAACGGATGATCTTGTGTATGTAACTGGAGAAAGTGACTATACCAAAGACTGGTTTTT
CGCTCAGGTTCCAAGGAGAAAAGAGGACGGCTCATATCAAGGAACGACATGGCAAATCAG
ATTTAAACTTGATTCAGTCAATCAAGGAGGCACGTATAAATTGCGTATTGCAATTGCATC
TGCAACTTTAGCTGAAGTACAGGTTCGGGTGAATAATCCAAGCACAAATCGACCTGTATT
TTCAACCGGATTGATTGGAAGAGACAACTCAATTGCTAGACACGGAATTCACGGATTATA
TTGGCTATACAATATAGACATACAGGGAAATCTGTTAGTACAAGGGGACAACACCATTTA
CTTAGGCCAACCAAGAAACCAAAGTCCTTTCCAGGGGATTATGTATGACTATATTCGTCT
CGAAGCTCCACCAAACTAAGCAGTGTTTCAGATTTCTAGTTCTAGAAATTGTTAACTGTT
TGATTTATATTACCATTACCAGTTTAGCATAACTTCTGGTTTGTGAAGCAATAAAATTCC
ACGTTTCGTTCAAGATGTTAACTGTTCCAATTACTTATGCAATCAACGATTGGGATTTAA
CTGAGTGTTATACAGAGATTAAAGTATTTGAAGTCGGTGGAATGATAATATATGCACCTC