Plant GARDEN
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g076640.2.1
CDS Infomation

Rhamnogalacturonate lyase family protein (AHRD V3.3 *** AT1G09890.4)
Sequence

ATGCATATTAATACCTTATACTATTCTGCCTATGCCAAACTGCAAGAAGAGTATAGAATT
AAGAAGAAGCTAAGATCAATGACTGCTCCAGGAGTACATCTACACCTTCCCGATGATCAC
CATGTGGTGATGGACAATGGCATTCTCCAAGTGACTTTATCAGTACCAGATGGCATTGTA
ACTGGAATTACATACAATGGCGTCGATAATTTGCTTGAGGTTCTAAATGATGAAACAAAC
AGAGGATACTGGGACGTTGTTTGGAGTTCGACAGGAACTACAGGGACTACTGGAACATTT
GAAAGGCTAATATGCACAACATATAAGGTCATATTGGAAACAGATGATCAAATAGAGTTG
TCCTTCACAAGGACATGGGATGTGTCGCTTCAGGACAAGCTTATTCCCCTGAACATAGAC
AAAAGGTTTATAATGCTTAAAGGTTCCTCAGGGTTCTATTCTTATGCAATTTACGAACAT
TTAGAGGGATGGCCTGGTTTCAACCTTGATGAAACTAGGATTGCATTCAAGCTCAGAAAA
GACAAGTTTCATTACATGGCTATGGCAGATAACAGGCAGAGATACATGCCCTTACCTGAT
GATAGGTTACCGGATAGAGGACAACCACTTGCTTATCCAGAAGCAGTCCTGCTTGTCAAT
CCCATCGAGCCTGAGTTCAAAGGCGAGGTTGATGACAAGTATCAGTACTCATGTGAAGAC
AAAGATCTCAAGGTCCATGGATGGATTTGTATGGATCCATCACTAGGATTCTGGATAATT
ATTCCCAGTGACGAATTTCGATCTGGAGGACCCCTTAAACAAAATCTCACATCTCATGTT
GGTCCAACTGCTCTTTCTGTGTTTCTCAGTGCTCATTATGCAGGAGAAGATTTGGTTCCA
AAGTTTGGACAAGGGGAGCCATGGAAAAAAGTCTTTGGACCAGTTTTTATATATCTGAAT
TCTGTCACTTCAGGGGAGGATCCTCTTACTCTTTGGGAGGATGCTAAAAAACAGATGTTG
ATGGAAGTTCAAAGCTGGCCTTACAGTTTTCCAGCCTCTGAGGATTTTCCATCATCGTCT
CAACGCGGTAATATTAGTGGAAGACTGTTAGTCCTAGACAGATACTTCAAAGACGATAAA
ATTTCTGCTTCTGGTGCATTCATTGGTTTGGCTCCACCAGGAGAAGCCGGTTCATGGCAA
AGAGAATGCAAGGACTACCAATTCTGGACAAGAGCAGATGAGGAAGGCAATTATGTCATA
AGTAATATACGAGCAGGCGACTATAATTTGTATGCATTTGTCCCTGGATTCATTGGTGAT
TACAAGTATGACATCAATATCACAATTACCTCAGGCTGCAGCATTGAGATGGATGATCTT
GTCTTTGAACCCCCAAGAAATGGACCTACACTCTGGGAAATTGGCATTCCTGATCGTTCT
GCTCGCGAGTTCTACATTCCTGATCCTGATCAAAAATATGTTAACAAACTCTTTATTAAT
CATCCTGATAGGTTTAGACAGTACGGGCTATGGGAAAGATACGCGGACTTGTATCCAAAT
GGAGATATAGTTTTTACAATTGGAGAGAGTGACTACAAGAAAGATTGGTTCTTTGTTCAA
GTCACTAGGAAAACTGATGAGAAGACATATCAAGGAACAACATGGCAAATAAAGTTCAAA
CTCGACAATGTTGATCAAAATGAAATCTATACACTAAGATTGGCACTTGCATCAGCAGCT
CAAGCTGAACTGCAGGTTCGCATCAATGATAATTCAAGCACGAATACTCCTCTATTTTCA
AGTGGAGTGATAGGGAAGGATAACGCGATAGCAAGACATGGAATTCATGGACTCTACTGG
TTGTTCAATGTGAATTTGCAGGGTACTATTCTAGTTGAAGGGGAAAATACTATATATTTG
ACACAAGCAAATGCAACTAGTCCCTTTCAAGGGATCATGTATGATTATATTCGTTTAGAA
GGACCTCCTTCTCATGACTAA

Peptide Sequence

PEP ID

Solyc04g076640.2.1
PEP Infomation

Rhamnogalacturonate lyase family protein (AHRD V3.3 *** AT1G09890.4)
Sequence

MHINTLYYSAYAKLQEEYRIKKKLRSMTAPGVHLHLPDDHHVVMDNGILQVTLSVPDGIV
TGITYNGVDNLLEVLNDETNRGYWDVVWSSTGTTGTTGTFERLICTTYKVILETDDQIEL
SFTRTWDVSLQDKLIPLNIDKRFIMLKGSSGFYSYAIYEHLEGWPGFNLDETRIAFKLRK
DKFHYMAMADNRQRYMPLPDDRLPDRGQPLAYPEAVLLVNPIEPEFKGEVDDKYQYSCED
KDLKVHGWICMDPSLGFWIIIPSDEFRSGGPLKQNLTSHVGPTALSVFLSAHYAGEDLVP
KFGQGEPWKKVFGPVFIYLNSVTSGEDPLTLWEDAKKQMLMEVQSWPYSFPASEDFPSSS
QRGNISGRLLVLDRYFKDDKISASGAFIGLAPPGEAGSWQRECKDYQFWTRADEEGNYVI
SNIRAGDYNLYAFVPGFIGDYKYDINITITSGCSIEMDDLVFEPPRNGPTLWEIGIPDRS
AREFYIPDPDQKYVNKLFINHPDRFRQYGLWERYADLYPNGDIVFTIGESDYKKDWFFVQ
VTRKTDEKTYQGTTWQIKFKLDNVDQNEIYTLRLALASAAQAELQVRINDNSSTNTPLFS
SGVIGKDNAIARHGIHGLYWLFNVNLQGTILVEGENTIYLTQANATSPFQGIMYDYIRLE
GPPSHD*

Transcript Sequence

Transcript ID

Solyc04g076640.2.1
Transcript Infomation

Rhamnogalacturonate lyase family protein (AHRD V3.3 *** AT1G09890.4)
Sequence

CTTTGTTTTCATTTTACTTATTAGTTATTACCTTTCAAGGGAAGTGTTGAATCAAACATA
TGCATATTAATACCTTATACTATTCTGCCTATGCCAAACTGCAAGAAGAGTATAGAATTA
AGAAGAAGCTAAGATCAATGACTGCTCCAGGAGTACATCTACACCTTCCCGATGATCACC
ATGTGGTGATGGACAATGGCATTCTCCAAGTGACTTTATCAGTACCAGATGGCATTGTAA
CTGGAATTACATACAATGGCGTCGATAATTTGCTTGAGGTTCTAAATGATGAAACAAACA
GAGGATACTGGGACGTTGTTTGGAGTTCGACAGGAACTACAGGGACTACTGGAACATTTG
AAAGGCTAATATGCACAACATATAAGGTCATATTGGAAACAGATGATCAAATAGAGTTGT
CCTTCACAAGGACATGGGATGTGTCGCTTCAGGACAAGCTTATTCCCCTGAACATAGACA
AAAGGTTTATAATGCTTAAAGGTTCCTCAGGGTTCTATTCTTATGCAATTTACGAACATT
TAGAGGGATGGCCTGGTTTCAACCTTGATGAAACTAGGATTGCATTCAAGCTCAGAAAAG
ACAAGTTTCATTACATGGCTATGGCAGATAACAGGCAGAGATACATGCCCTTACCTGATG
ATAGGTTACCGGATAGAGGACAACCACTTGCTTATCCAGAAGCAGTCCTGCTTGTCAATC
CCATCGAGCCTGAGTTCAAAGGCGAGGTTGATGACAAGTATCAGTACTCATGTGAAGACA
AAGATCTCAAGGTCCATGGATGGATTTGTATGGATCCATCACTAGGATTCTGGATAATTA
TTCCCAGTGACGAATTTCGATCTGGAGGACCCCTTAAACAAAATCTCACATCTCATGTTG
GTCCAACTGCTCTTTCTGTGTTTCTCAGTGCTCATTATGCAGGAGAAGATTTGGTTCCAA
AGTTTGGACAAGGGGAGCCATGGAAAAAAGTCTTTGGACCAGTTTTTATATATCTGAATT
CTGTCACTTCAGGGGAGGATCCTCTTACTCTTTGGGAGGATGCTAAAAAACAGATGTTGA
TGGAAGTTCAAAGCTGGCCTTACAGTTTTCCAGCCTCTGAGGATTTTCCATCATCGTCTC
AACGCGGTAATATTAGTGGAAGACTGTTAGTCCTAGACAGATACTTCAAAGACGATAAAA
TTTCTGCTTCTGGTGCATTCATTGGTTTGGCTCCACCAGGAGAAGCCGGTTCATGGCAAA
GAGAATGCAAGGACTACCAATTCTGGACAAGAGCAGATGAGGAAGGCAATTATGTCATAA
GTAATATACGAGCAGGCGACTATAATTTGTATGCATTTGTCCCTGGATTCATTGGTGATT
ACAAGTATGACATCAATATCACAATTACCTCAGGCTGCAGCATTGAGATGGATGATCTTG
TCTTTGAACCCCCAAGAAATGGACCTACACTCTGGGAAATTGGCATTCCTGATCGTTCTG
CTCGCGAGTTCTACATTCCTGATCCTGATCAAAAATATGTTAACAAACTCTTTATTAATC
ATCCTGATAGGTTTAGACAGTACGGGCTATGGGAAAGATACGCGGACTTGTATCCAAATG
GAGATATAGTTTTTACAATTGGAGAGAGTGACTACAAGAAAGATTGGTTCTTTGTTCAAG
TCACTAGGAAAACTGATGAGAAGACATATCAAGGAACAACATGGCAAATAAAGTTCAAAC
TCGACAATGTTGATCAAAATGAAATCTATACACTAAGATTGGCACTTGCATCAGCAGCTC
AAGCTGAACTGCAGGTTCGCATCAATGATAATTCAAGCACGAATACTCCTCTATTTTCAA
GTGGAGTGATAGGGAAGGATAACGCGATAGCAAGACATGGAATTCATGGACTCTACTGGT
TGTTCAATGTGAATTTGCAGGGTACTATTCTAGTTGAAGGGGAAAATACTATATATTTGA
CACAAGCAAATGCAACTAGTCCCTTTCAAGGGATCATGTATGATTATATTCGTTTAGAAG
GACCTCCTTCTCATGACTAAGACATATTGTTTGAGAATTCATTGTTTATATATTATACTA
TTTTAACTTTTATGAGAATTTAAATTGTATACACTGACAGAATAACAAATTTGTAAATTC
TCTATGCATGCATTATCTACCCAAATGTTGGCATATAGTATGT