Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc04g076400.3.1
CDS Infomation	Protein VERNALIZATION INSENSITIVE 3 (AHRD V3.3 *** W9SPV3_9ROSA)
Sequence	ATGAATGAGAAAGGAATAGGGCAGTGGAAATTTTTTTCTTCAGCTATGGAGTCTGCATTA TCAGGTCTCGTTCTCGATCCCTATAAATTTAGCCAATTGAGTATGGAAGATAGAAGGCAA TTAGTACATGAAATTTCCCAATGCCCTGAAGATGCGCCGAAGATCTTGAGCTCGCTGACC AGAAAAGAACTACTAGAGATTATATGTGCTGAGATGGGCGAAGAGAGAAAATACTCTGGC TACACAAAATTCAAAATGATAGATCACCTTCTAAAGCTGGTTTCCTGTAAGTCTAACACA GATACTGGCCCTACCTTCAAAAGGCAGCGGACGCAAGAATATCAATGTCAACCTTCGGTT CAGAATGATGAAGTTAATCGGGAGATGGGAAGCAAAACCCAGGTCCTACTCTGTCATAAT CTGGTATGTAGAGCTTCTCTTGAAAGAGATGATGTTTTCTGCAAACGATGTTCTTGCTGC ATTTGTCATCAGTACGATGATAATAAAGACCCTAGCTTGTGGTTAACCTGTGATTCTGAT TCTCAAGATGAAACTAAACCATGTGGATTGTCATGCCATCTAAAATGTGCACTTGAGCAT GAACAATCAGGCATATTGAAGAATTGCATCAATCCAAAATTGGATGGAGATTTCTATTGT GTTTCTTGTGGAAAAATTAATGGGATAATGAGAACCTTGAGAAAACAATTGATGACAGCA AAGGAGGCGAGAAGAGTTGATGTGCTGTGTTTAAGAATCTCTCTGAGCCATAAAATTCTA GAGAAAACTGAGAAATACAAAGGACTGCTGAAAGTTGTTGAATTGGCTGCTGAGATGCTG AAGAATGAAATAGGGCCTCTTGCACAGGCATCAGAGAAAATGGATCGCAGGATAGTGAAC AGGCTTTCTTGCGGTACTGCTGTTCAGAATCTTTGTGGCTCTGCAGTGGGCACTTTTGAT TCCATGTTTCAGAATCAATTCTCTAGTCATACGAAAATGGAAGAGACTCCGATGTCTTGC CGGATACATCTTGAGGAGCAATCTCCATCTAAAGTAACGATTGTCTTCGAATATGATGAT TGTGTGCTGAAAGAACTTATGGGCTTCAAATTGTGGTACCGGAAGTCCACAACAAACAAA TATCCTGATGAGGCAACTTTTATTGCACTAAGCCCTGTGAAGAAATTTAAGCTGGATGGT CTTGATCCTTTGACACAGTACTTCTGCAAGGTTTCTTTCTTCAACAAGGCAGCGACTTTG GGGGTTCAGGAGGTGAATTGGGTAACACCTCCTGTACAGACAAGCTACAAGTCAGGTTCA GATAATGCCACTATAGATACTACACTGATGCATGCTGAGTCAATGAGTTCTACTGACCAC AAACTAACAACTTATGATCCAAAACCATGCTCCCTGAATGACATTGAAAGCCAAGCTAAT GCATCTCCTGTATCCCCTCTTCCCAAGATGCACATTCCTTTAGCTAGTCCACTTTCAAGT GCACCTGCCACACCTTGTCAAACTAATGGATCAAAGGAAGTGCAATTGCGTGGCATTGGA CAAGTGAAGGTAAGTGATTATGAGTACTCTGTAGGGATCATCAAGAAGTTGGAACACGAA GGGCTTATAGAAACAGATTTCAGAGTGAAGTTCTTGACTTGGTTTAGCTTGAAAGCCACG ACACAAGAAAGAAAGGTTGTTCGAGTCTTTATAGACACCTTTGTCGATGACCATTCAAGT TTGGCAGAACAACTCATGGACACATTCATGGATGAGATATGCATGGAGCAGAAAGTCGAC CTACATGCAATCTACAGTAAATTCTGGCATTAA

Peptide Sequence

PEP ID	Solyc04g076400.3.1
PEP Infomation	Protein VERNALIZATION INSENSITIVE 3 (AHRD V3.3 *** W9SPV3_9ROSA)
Sequence	MNEKGIGQWKFFSSAMESALSGLVLDPYKFSQLSMEDRRQLVHEISQCPEDAPKILSSLT RKELLEIICAEMGEERKYSGYTKFKMIDHLLKLVSCKSNTDTGPTFKRQRTQEYQCQPSV QNDEVNREMGSKTQVLLCHNLVCRASLERDDVFCKRCSCCICHQYDDNKDPSLWLTCDSD SQDETKPCGLSCHLKCALEHEQSGILKNCINPKLDGDFYCVSCGKINGIMRTLRKQLMTA KEARRVDVLCLRISLSHKILEKTEKYKGLLKVVELAAEMLKNEIGPLAQASEKMDRRIVN RLSCGTAVQNLCGSAVGTFDSMFQNQFSSHTKMEETPMSCRIHLEEQSPSKVTIVFEYDD CVLKELMGFKLWYRKSTTNKYPDEATFIALSPVKKFKLDGLDPLTQYFCKVSFFNKAATL GVQEVNWVTPPVQTSYKSGSDNATIDTTLMHAESMSSTDHKLTTYDPKPCSLNDIESQAN ASPVSPLPKMHIPLASPLSSAPATPCQTNGSKEVQLRGIGQVKVSDYEYSVGIIKKLEHE GLIETDFRVKFLTWFSLKATTQERKVVRVFIDTFVDDHSSLAEQLMDTFMDEICMEQKVD LHAIYSKFWH*

Transcript Sequence

Transcript ID	Solyc04g076400.3.1
Transcript Infomation	Protein VERNALIZATION INSENSITIVE 3 (AHRD V3.3 *** W9SPV3_9ROSA)
Sequence	AAAAAATATTCGTATCTAGTAAGAATGATTTATCACGTGTTCAAACGCTCAATCACGGAA AAGTGAAGGCCATTTCCTTTTTGTTTGTTTATAGGGTTAAAATAAAAAAAAATAGCATGC GGGTCCCTTATTAATCTCTCATTCGCTTTCACATTCTGAAAATCACCTCCATAATCTGAC ATCCATGGCTACAACATATACTATAATAATAATAATAATAATAATTTTTTTCTCTTTTTC CTATCCAACTTTTTAATGCTTACCCTTCACTCTTTACCCCACTACCCCAACCCACAACTT GCCTCTTTCACGCACACACACACACACAGAAGAAAAGTAGTAAACAATGTTGTTCTTGTT TTGAGATTTTCTTGATCTCATAAAGGTGGAGTCTTTTTACCTGCATTGTTGTATTTTGGG TTAGTTTGTGAGTTTTTACTAAGTGGGGTTTGGTTATTTTGTTTGATTTGTATGAATGAG AAAGGAATAGGGCAGTGGAAATTTTTTTCTTCAGCTATGGAGTCTGCATTATCAGGTCTC GTTCTCGATCCCTATAAATTTAGCCAATTGAGTATGGAAGATAGAAGGCAATTAGTACAT GAAATTTCCCAATGCCCTGAAGATGCGCCGAAGATCTTGAGCTCGCTGACCAGAAAAGAA CTACTAGAGATTATATGTGCTGAGATGGGCGAAGAGAGAAAATACTCTGGCTACACAAAA TTCAAAATGATAGATCACCTTCTAAAGCTGGTTTCCTGTAAGTCTAACACAGATACTGGC CCTACCTTCAAAAGGCAGCGGACGCAAGAATATCAATGTCAACCTTCGGTTCAGAATGAT GAAGTTAATCGGGAGATGGGAAGCAAAACCCAGGTCCTACTCTGTCATAATCTGGTATGT AGAGCTTCTCTTGAAAGAGATGATGTTTTCTGCAAACGATGTTCTTGCTGCATTTGTCAT CAGTACGATGATAATAAAGACCCTAGCTTGTGGTTAACCTGTGATTCTGATTCTCAAGAT GAAACTAAACCATGTGGATTGTCATGCCATCTAAAATGTGCACTTGAGCATGAACAATCA GGCATATTGAAGAATTGCATCAATCCAAAATTGGATGGAGATTTCTATTGTGTTTCTTGT GGAAAAATTAATGGGATAATGAGAACCTTGAGAAAACAATTGATGACAGCAAAGGAGGCG AGAAGAGTTGATGTGCTGTGTTTAAGAATCTCTCTGAGCCATAAAATTCTAGAGAAAACT GAGAAATACAAAGGACTGCTGAAAGTTGTTGAATTGGCTGCTGAGATGCTGAAGAATGAA ATAGGGCCTCTTGCACAGGCATCAGAGAAAATGGATCGCAGGATAGTGAACAGGCTTTCT TGCGGTACTGCTGTTCAGAATCTTTGTGGCTCTGCAGTGGGCACTTTTGATTCCATGTTT CAGAATCAATTCTCTAGTCATACGAAAATGGAAGAGACTCCGATGTCTTGCCGGATACAT CTTGAGGAGCAATCTCCATCTAAAGTAACGATTGTCTTCGAATATGATGATTGTGTGCTG AAAGAACTTATGGGCTTCAAATTGTGGTACCGGAAGTCCACAACAAACAAATATCCTGAT GAGGCAACTTTTATTGCACTAAGCCCTGTGAAGAAATTTAAGCTGGATGGTCTTGATCCT TTGACACAGTACTTCTGCAAGGTTTCTTTCTTCAACAAGGCAGCGACTTTGGGGGTTCAG GAGGTGAATTGGGTAACACCTCCTGTACAGACAAGCTACAAGTCAGGTTCAGATAATGCC ACTATAGATACTACACTGATGCATGCTGAGTCAATGAGTTCTACTGACCACAAACTAACA ACTTATGATCCAAAACCATGCTCCCTGAATGACATTGAAAGCCAAGCTAATGCATCTCCT GTATCCCCTCTTCCCAAGATGCACATTCCTTTAGCTAGTCCACTTTCAAGTGCACCTGCC ACACCTTGTCAAACTAATGGATCAAAGGAAGTGCAATTGCGTGGCATTGGACAAGTGAAG GTAAGTGATTATGAGTACTCTGTAGGGATCATCAAGAAGTTGGAACACGAAGGGCTTATA GAAACAGATTTCAGAGTGAAGTTCTTGACTTGGTTTAGCTTGAAAGCCACGACACAAGAA AGAAAGGTTGTTCGAGTCTTTATAGACACCTTTGTCGATGACCATTCAAGTTTGGCAGAA CAACTCATGGACACATTCATGGATGAGATATGCATGGAGCAGAAAGTCGACCTACATGCA ATCTACAGTAAATTCTGGCATTAAACAAACATCTACTTTCTGAAATTAGCTAGGGGATAA ACTTTGCACAGTTGATGTGATGCTACTAACCAATCTTTGACAACTTATGCTCTCTGAAAA TTATTCTTGTGAATCATAGCTGTTATCTCTAGAGATAAAAGAGAGGTGTCTGTTTTGTGC ATGAAACTCAATCTTGAAGTAAACCTGTTATTTGAACAGGATTTGATGTTGTTGGAGATA ACATTTCCAGAAAGATGGGAAACCTTTTTCATGAACCAAATGTTTTTGGATACAAGTAAT TAGGGGAGAAATGTAATCAGTTTATCAAAAGAAAAAAAGAAAAGAACTAGGGAAGAAATA TTTAGATTTTATTTTTGATCCAAATATGACCATGATGAAGGAGACAGAAAAAATCTGTCT GTTGCTGAAGTTATTTTTTTCATGAATATGTTTCTATTGTAAAAATAGATATTTTCTGGA TGTTTGGTTACTGAAAATGCTCTCACAAGCCCTTTTCCTTAAAACTATATTTAACTTGGA CCATTATTACTTGCTCCAAACTAATATTTAGACATTATTATTAATCTCTAGAACTAAAAG ATTCTTCAAAACACTACCAGATTTGCTAGCATTGTTACTTACTAGTTAATATATATACTT TTTCAAAAAATATTTCACCTCACCAAACACCATTTTTCGAAAAATGTTCTCTATAAAAAG TAACTTCCACGTACCAAAGACAAACATAACCTTCTTCCAATATCAATGTAATTTCTTTAG TAAATGAAACAGGAACCAATATCTGTACTCTGAGTTCACAGTTCCAAAAGAAATCAAACC TGAGTGCATAAAATCTGTTTCACTCCAAGGATATCAAGAGCTAGTCAATATTGACATGGA TTGAAACTTATTAGGCGTCGATGATAGCTTAAAATGAGCAGGAAACTGTAAAGATTTGGT TTGGACTATAGCTCAACTTACTATTTGCGGAAACTAAAGGAGTAAATGACATTAAAATAA CTAAAAAGTTCAAGCATCAAAAGCTTTGTGTGTTAGATTCATTATTCACAGTCTTCACCA GCTGCTTCATTGAAAGCGGCAGCCAGATATTCAGCGAGGCATTTCTGGGGAGTAGATTTT GTTGGAGTCTCTCCAAGTTTAGCTCTTTTTGCGCTGATGGAGTTGGGAAGCCGGGATTTC AGACAGTCCTGTGTATCGCCACGTGGCTTCCATATAACCGGCTTCAATGCTTTCCATGGG TCTTCCATCATTGACTCATTATAGTAGAATTTGAATCTACCCTTGCCTCCTCTTGAACCT TGGTAAGCCTTGCTTCTGAATCCTGAACCTTGGTAGGGGCTACCTTGCCCATATTGGCTA CCAGCTCCACTAACTTGAGGAGAACCATGGCCGGAAATACCACCAATTTGCGGTGAATTA GGCAAAGAGTAGTTGTTAGGTGTGCCAAGAGAGCTACCCAACGTGGAGTCCCCCTGTGGC ATGCAAAAGGGATTAGTATTCCTACGGATTCCAAGAGGAATGGCATTGACTCCTCGTGGC CAATATGTTCTTTGAGCCGAGTTATAGTTGCCTTGAGCATGATAAGCAAAAGAGCCAGCA TTCATAGGTCCTGAAAAAAAAAAGATTAGACAAGGGTAAA