Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g076390.3.1
CDS Infomation

Cysteinyl-tRNA synthetase, putative (AHRD V3.3 *** B9RP10_RICCO)
Sequence

ATGGCGACGCTACTAAAATGCTACAAACCGTTGCTTCCCTTCCAAAGGCCTAAAATGCAC
ATTGCCGCCGCCGCCGTCAATAGTTTCAGATACTATTCGAGAAGCAGACTTAGGGCAAGG
TGCCTGAGTACAATCGGAAATTCAAAGTCAACGGTGGATATAAAAGTGGTTAACAGTGAA
GGAACTGAGACTGTATTGAGGAAGCAGCAACTATGGTTACACAATACAATGAGCAAACAA
AAGGAACTATTTATACCAAAAGTGCCGGGAAAAGTTGGAATGTATGTGTGTGGTGTAACG
GCGTATGATCTCAGCCATATCGGCCATGCTCGCGTTTATGTTTCCTTTGATGTTCTATAT
AGATACCTAAATTATTTGGGATATGAAGTCAAATATGTTCGCAACTTTACTGATGTTGAT
GACAAGATTATTGCTAGAGCAAATGAGCTGGGTGAGGATCCAATCATATTGAGCAGACGC
TTTTGCGAAGAATTTCACCAAGACATGGCTTATCTTCACTGTCTTCCTCCTTCAGTGGAA
CCTCGTGTGTCTGATCACATGCCTCAGATAATCAATATGATTCAGCAGATTCTCGATAAT
GGTTGTGCTTACAGAATCAATGGTGATGTCTACTTTTCTGTAGACAAATTCCCAGAATAT
GGAACATTATCTGGCCGAAAATTGGAAGATAATAGGGCAGGAGAACGTGTAGCAGTAGAC
ACAAGGAAGAAGCATCCAGCCGATTTTGCCTTGTGGAAAACTGCTAAGGCGGGAGAACCT
TTCTGGGAGAGTCCCTGGGGTCCAGGAAGACCTGGATGGCATATTGAGTGCAGTGCCATG
AGTGCTGCATACTTGGGATATACTTTCGACATTCATGGAGGGGGGATGGATCTCGTGTTT
CCTCATCATGAAAATGAAATTGCCCAGAGCTGTGCTGCTTGTAGGGAGAGCAACATAACT
TATTGGATACACAATGGATTTGTCAACATTGACTCTCAGAAAATGTCAAAGTCACTAGGG
AACTTTTTCACAATTCGGCAGGTGATTGATTTTTATCACCCATTGGCACTTAGGCTTTTC
TTAATTGGGACACATTATAGATCTCCAATCAATTACACGATTGTACAGATTGAGAGTGCA
TCTGACCGCCTTTTTTACATATATCAGGCATTATATGATTGTCAAATTCTTTCCACCCAG
CATGATGAGGCAAGTCTGAAGGATTCTATTCCTGCAGAAACTGCTAATTGTATAAATAAA
TTCCAAGATGAAGTTTTATCTTCAATATCAGATGATCTTCACACTCCTGTTGCACTGGCA
GCAATGTCGGATCCATTGAAGTTGATCAATGATCTCTTGCATACACGGAAGGGTAAAAAG
CAAGCATTGCGGATGGAGTCAATTGCAGCATTAGAGAATGCTATAAGGAATGTTCTAGCA
ATTCTGGGGCTTGTGCCAGCCAGTTACGCAGAGGCTTTAAATGAATTGAGGGAGAAAGCT
TTGAAGCGTGCAAAGTTGACTGACGATCAAGTTCAGCAAAAAATCGTGGAGAGGGATACA
GCACGTAAAAATAAAGATTATGATAGATCGGATGTAATTCGAAAAGATTTGGCTGCTGTA
GGTATTGCCTTGATGGATAGCCCTGAAGGCACTACATGGAGACCAGCTTTTCCTCTTGCA
TTGGAAGAAGAGCAGGTTACAGCTCCTTGA

Peptide Sequence

PEP ID

Solyc04g076390.3.1
PEP Infomation

Cysteinyl-tRNA synthetase, putative (AHRD V3.3 *** B9RP10_RICCO)
Sequence

MATLLKCYKPLLPFQRPKMHIAAAAVNSFRYYSRSRLRARCLSTIGNSKSTVDIKVVNSE
GTETVLRKQQLWLHNTMSKQKELFIPKVPGKVGMYVCGVTAYDLSHIGHARVYVSFDVLY
RYLNYLGYEVKYVRNFTDVDDKIIARANELGEDPIILSRRFCEEFHQDMAYLHCLPPSVE
PRVSDHMPQIINMIQQILDNGCAYRINGDVYFSVDKFPEYGTLSGRKLEDNRAGERVAVD
TRKKHPADFALWKTAKAGEPFWESPWGPGRPGWHIECSAMSAAYLGYTFDIHGGGMDLVF
PHHENEIAQSCAACRESNITYWIHNGFVNIDSQKMSKSLGNFFTIRQVIDFYHPLALRLF
LIGTHYRSPINYTIVQIESASDRLFYIYQALYDCQILSTQHDEASLKDSIPAETANCINK
FQDEVLSSISDDLHTPVALAAMSDPLKLINDLLHTRKGKKQALRMESIAALENAIRNVLA
ILGLVPASYAEALNELREKALKRAKLTDDQVQQKIVERDTARKNKDYDRSDVIRKDLAAV
GIALMDSPEGTTWRPAFPLALEEEQVTAP*

Transcript Sequence

Transcript ID

Solyc04g076390.3.1
Transcript Infomation

Cysteinyl-tRNA synthetase, putative (AHRD V3.3 *** B9RP10_RICCO)
Sequence

ATAGAGCAGCAACACTCGTTAAACAAAGATAAAACTATTCTGGAAGTCGCCGGCCGGCTA
GTCCTCCGCCGCCCCTCCGCTTCCTCCTCCGCCGCTCTGAATGGCGACGCTACTAAAATG
CTACAAACCGTTGCTTCCCTTCCAAAGGCCTAAAATGCACATTGCCGCCGCCGCCGTCAA
TAGTTTCAGATACTATTCGAGAAGCAGACTTAGGGCAAGGTGCCTGAGTACAATCGGAAA
TTCAAAGTCAACGGTGGATATAAAAGTGGTTAACAGTGAAGGAACTGAGACTGTATTGAG
GAAGCAGCAACTATGGTTACACAATACAATGAGCAAACAAAAGGAACTATTTATACCAAA
AGTGCCGGGAAAAGTTGGAATGTATGTGTGTGGTGTAACGGCGTATGATCTCAGCCATAT
CGGCCATGCTCGCGTTTATGTTTCCTTTGATGTTCTATATAGATACCTAAATTATTTGGG
ATATGAAGTCAAATATGTTCGCAACTTTACTGATGTTGATGACAAGATTATTGCTAGAGC
AAATGAGCTGGGTGAGGATCCAATCATATTGAGCAGACGCTTTTGCGAAGAATTTCACCA
AGACATGGCTTATCTTCACTGTCTTCCTCCTTCAGTGGAACCTCGTGTGTCTGATCACAT
GCCTCAGATAATCAATATGATTCAGCAGATTCTCGATAATGGTTGTGCTTACAGAATCAA
TGGTGATGTCTACTTTTCTGTAGACAAATTCCCAGAATATGGAACATTATCTGGCCGAAA
ATTGGAAGATAATAGGGCAGGAGAACGTGTAGCAGTAGACACAAGGAAGAAGCATCCAGC
CGATTTTGCCTTGTGGAAAACTGCTAAGGCGGGAGAACCTTTCTGGGAGAGTCCCTGGGG
TCCAGGAAGACCTGGATGGCATATTGAGTGCAGTGCCATGAGTGCTGCATACTTGGGATA
TACTTTCGACATTCATGGAGGGGGGATGGATCTCGTGTTTCCTCATCATGAAAATGAAAT
TGCCCAGAGCTGTGCTGCTTGTAGGGAGAGCAACATAACTTATTGGATACACAATGGATT
TGTCAACATTGACTCTCAGAAAATGTCAAAGTCACTAGGGAACTTTTTCACAATTCGGCA
GGTGATTGATTTTTATCACCCATTGGCACTTAGGCTTTTCTTAATTGGGACACATTATAG
ATCTCCAATCAATTACACGATTGTACAGATTGAGAGTGCATCTGACCGCCTTTTTTACAT
ATATCAGGCATTATATGATTGTCAAATTCTTTCCACCCAGCATGATGAGGCAAGTCTGAA
GGATTCTATTCCTGCAGAAACTGCTAATTGTATAAATAAATTCCAAGATGAAGTTTTATC
TTCAATATCAGATGATCTTCACACTCCTGTTGCACTGGCAGCAATGTCGGATCCATTGAA
GTTGATCAATGATCTCTTGCATACACGGAAGGGTAAAAAGCAAGCATTGCGGATGGAGTC
AATTGCAGCATTAGAGAATGCTATAAGGAATGTTCTAGCAATTCTGGGGCTTGTGCCAGC
CAGTTACGCAGAGGCTTTAAATGAATTGAGGGAGAAAGCTTTGAAGCGTGCAAAGTTGAC
TGACGATCAAGTTCAGCAAAAAATCGTGGAGAGGGATACAGCACGTAAAAATAAAGATTA
TGATAGATCGGATGTAATTCGAAAAGATTTGGCTGCTGTAGGTATTGCCTTGATGGATAG
CCCTGAAGGCACTACATGGAGACCAGCTTTTCCTCTTGCATTGGAAGAAGAGCAGGTTAC
AGCTCCTTGAAATTTGTCACATATTTGCAATAACCTGCCATGTTGTGCATATCAATTTTG
CAAAATGATGTATGTTTAGTCCCATTCTTAAGTAAGAAAAGGTTTGGTTGTAACATCATA
GAGAAGCAAAGTAAATTTTGTAGAGTTGCAATGCAAAACAGGAAGGCCTTTATTTGTATG
CAACAGACATCTCTTTCTCATTGATACTTAA