Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g076290.3.1
CDS Infomation

O-fucosyltransferase family protein (AHRD V3.3 *** AT4G24530.1)
Sequence

ATGAACTACGTCCGGCAGATTCCGACGAGTCGGAGAATGGCATGGCCCCTGCAAATGGGT
GGACTTTTGATGCTTCTTCTACCAAGTCTGTTTCCCAGTCTTTTCTCTCCTCTTAGCCGC
TCTTATCCTTCCGTTTTCTCTGAATGGAATGCTCCAAGGCCTATGCACTCACATTTACTA
AACAGGGCTTTGCAACAACAGACATCCAAGCCTCAAGAAGCAGAACTTTGGTCTCCCTTG
CCTGACCAGGGATGGGAAGCCTGCGCTTATAAACAGGAAACTCAATCATTGGGTAGGAAG
TCCCAGGGGTACATACAGGTGTTTTTGGATGGAGGACTGAACCAACAGAGGATGGGGATC
TGTGATGCAGTAGCTGTTGCCAAAATTTTAAATGCAACACTTGTAATTCCGTATCTTGAA
GTAAATCCAGTTTGGCAGGATTCAAGTTCCTTTGCAGATATATTTGATGTTGATCACTTT
ATCAGTGTCTTGAGTGGTGATATTTCTATAGTTAAAGAGCTTCCCAGTGACTACTCCTGG
AGTACCAGAGAATATTATGCAACAGGCATACGTCCTACTAGAATTAAGACTGCACCTGTA
CATGCTTCTGCTTCATGGTACCAGGAGAATGTTCTGCCTGTAATGCAGAGCTATGGGATT
GTAGCTATAGCTCCATTCTCTCACCGTTTGGCTTTTGATAACCAACCTTCAGACATCCAG
CATCTGCGCTGTAAGGTCAACTTTCACGCTCTAGTTTTTGTTCCCCATGTCAGAAGATTA
GGCGATGCACTCGTCAGTCGTCTGCGTAGCCCTCCTGGTTTAAATAACGCATCAAGCGCT
ACAGACTTCCACAATTGGGAAAATGACAGAGCAGGAGCTGGGAAGTATGTTGTATTGCAT
CTTCGCTTTGATAAAGATATGGCTGCTCACTCAGCTTGTGATTTTGGTGGCGGCAAAGCT
GAGAAACTTGCTCTTGCAAAATATCGGCAAGTACTTTGGCAAGGGAGAGTGCTAAACTCC
CAATTCACAGATGAAGAGTTAAGAGGCCAAGGGCGTTGTCCATTAACTCCGGAAGAGATA
GGACTTCTTTTGTCAGCCTTGGGATTTAACAACAGCACACGCCTATATCTTGCTTCCCAC
AAGGTTTACGGTGGAGAAGCAAGGATATCAGCACTCCGCCAGTTATTTCCATTTATGGAG
GACAAGAAAAGCCTTGCTTCTTCTCATGAACTATCTGAAGTAGAAGGAAAAGCTTCTTTA
CTAGCAGCTGTGGATTATTACGTGAGCATGCAGAGTGATATATTCATTTCTGCCTCTCCC
GGCAATATGCACAATGCACTGTTGGGGCATCGAGCATACAAGAATCTTAAGACCGTTAGA
CCAAACATGACATTGTTAGGCAAGCTCTTCCTCAACAAGACTATTGAGTGGTCTGAATTT
CAGCAGGCAGTACAGCAGGGTCACAAGAATAGACAAGGACAAATGCGGATACGCAAGGAG
AAGCAGTCGATATATACTTACCCTGCTCCTGATTGCATGTGTAAAGCTTAA

Peptide Sequence

PEP ID

Solyc04g076290.3.1
PEP Infomation

O-fucosyltransferase family protein (AHRD V3.3 *** AT4G24530.1)
Sequence

MNYVRQIPTSRRMAWPLQMGGLLMLLLPSLFPSLFSPLSRSYPSVFSEWNAPRPMHSHLL
NRALQQQTSKPQEAELWSPLPDQGWEACAYKQETQSLGRKSQGYIQVFLDGGLNQQRMGI
CDAVAVAKILNATLVIPYLEVNPVWQDSSSFADIFDVDHFISVLSGDISIVKELPSDYSW
STREYYATGIRPTRIKTAPVHASASWYQENVLPVMQSYGIVAIAPFSHRLAFDNQPSDIQ
HLRCKVNFHALVFVPHVRRLGDALVSRLRSPPGLNNASSATDFHNWENDRAGAGKYVVLH
LRFDKDMAAHSACDFGGGKAEKLALAKYRQVLWQGRVLNSQFTDEELRGQGRCPLTPEEI
GLLLSALGFNNSTRLYLASHKVYGGEARISALRQLFPFMEDKKSLASSHELSEVEGKASL
LAAVDYYVSMQSDIFISASPGNMHNALLGHRAYKNLKTVRPNMTLLGKLFLNKTIEWSEF
QQAVQQGHKNRQGQMRIRKEKQSIYTYPAPDCMCKA*

Transcript Sequence

Transcript ID

Solyc04g076290.3.1
Transcript Infomation

O-fucosyltransferase family protein (AHRD V3.3 *** AT4G24530.1)
Sequence

TGTATTTAATTTTGTTTATTCTGATTGAGCGTGTAGCACTAGTACATCGGGTAAGAGCCA
GTTTATAAGATATGAGTTCGATCAAATTTAATGCATGTTATTCATAATTGTATACAAATT
ATTGATTTAGATACCAATAACTTTAATAGAATAGAATCCCAAATCATAAACTTTAAATCT
TCACTCCGGTTCTTCTAAAGCTATACAACCCATCTCAAATAACTACACAATTAAGCGATT
TCATCCTCTCTTTTTTTTTAAATTGAAGTTTAGGTTGCATATATCATATATGACTGAAGT
TCGGACATTTCTACGTGAAGTTTTGGTCTGGAGAACGCCGATCAGATAAAGCATATCTAT
ACTACCTAGTATTAATTCGGGAATGAAGAGCTTTGTCATCTCAATGAATAAGTGAATCTT
TCCTTGCATGCAGATTTTAAAATCGTAAATCTTTTAATGGCACGCAATTCATTATATCAT
AACATACACTCTCTCATAACTTAATGTGATATTACTTATGGGAAATACAGTAATTCATAA
GAAATACACATTGGCATCTTACAATAAAAAAAAATATAATCTAAAATTCAAAATACAAAA
ATAGTTGGCTATGAATGCAAAATATTAAACAAGTGGCTACGCCTTAAATGGATGTACAAA
AATTGGCTACTCTTGTAAAGTTACTTCATGAGAAGCCCAAATGTTTTAGCCCAAACAGAT
CAGCCCATGATCACGCAAATGAGTTAACTGAAAAGTATTTTACAGATCGGTAAATACGAC
GGCGACGGTGAAGCACCGGCACGATGAACTACGTCCGGCAGATTCCGACGAGTCGGAGAA
TGGCATGGCCCCTGCAAATGGGTGGACTTTTGATGCTTCTTCTACCAAGTCTGTTTCCCA
GTCTTTTCTCTCCTCTTAGCCGCTCTTATCCTTCCGTTTTCTCTGAATGGAATGCTCCAA
GGCCTATGCACTCACATTTACTAAACAGGGCTTTGCAACAACAGACATCCAAGCCTCAAG
AAGCAGAACTTTGGTCTCCCTTGCCTGACCAGGGATGGGAAGCCTGCGCTTATAAACAGG
AAACTCAATCATTGGGTAGGAAGTCCCAGGGGTACATACAGGTGTTTTTGGATGGAGGAC
TGAACCAACAGAGGATGGGGATCTGTGATGCAGTAGCTGTTGCCAAAATTTTAAATGCAA
CACTTGTAATTCCGTATCTTGAAGTAAATCCAGTTTGGCAGGATTCAAGTTCCTTTGCAG
ATATATTTGATGTTGATCACTTTATCAGTGTCTTGAGTGGTGATATTTCTATAGTTAAAG
AGCTTCCCAGTGACTACTCCTGGAGTACCAGAGAATATTATGCAACAGGCATACGTCCTA
CTAGAATTAAGACTGCACCTGTACATGCTTCTGCTTCATGGTACCAGGAGAATGTTCTGC
CTGTAATGCAGAGCTATGGGATTGTAGCTATAGCTCCATTCTCTCACCGTTTGGCTTTTG
ATAACCAACCTTCAGACATCCAGCATCTGCGCTGTAAGGTCAACTTTCACGCTCTAGTTT
TTGTTCCCCATGTCAGAAGATTAGGCGATGCACTCGTCAGTCGTCTGCGTAGCCCTCCTG
GTTTAAATAACGCATCAAGCGCTACAGACTTCCACAATTGGGAAAATGACAGAGCAGGAG
CTGGGAAGTATGTTGTATTGCATCTTCGCTTTGATAAAGATATGGCTGCTCACTCAGCTT
GTGATTTTGGTGGCGGCAAAGCTGAGAAACTTGCTCTTGCAAAATATCGGCAAGTACTTT
GGCAAGGGAGAGTGCTAAACTCCCAATTCACAGATGAAGAGTTAAGAGGCCAAGGGCGTT
GTCCATTAACTCCGGAAGAGATAGGACTTCTTTTGTCAGCCTTGGGATTTAACAACAGCA
CACGCCTATATCTTGCTTCCCACAAGGTTTACGGTGGAGAAGCAAGGATATCAGCACTCC
GCCAGTTATTTCCATTTATGGAGGACAAGAAAAGCCTTGCTTCTTCTCATGAACTATCTG
AAGTAGAAGGAAAAGCTTCTTTACTAGCAGCTGTGGATTATTACGTGAGCATGCAGAGTG
ATATATTCATTTCTGCCTCTCCCGGCAATATGCACAATGCACTGTTGGGGCATCGAGCAT
ACAAGAATCTTAAGACCGTTAGACCAAACATGACATTGTTAGGCAAGCTCTTCCTCAACA
AGACTATTGAGTGGTCTGAATTTCAGCAGGCAGTACAGCAGGGTCACAAGAATAGACAAG
GACAAATGCGGATACGCAAGGAGAAGCAGTCGATATATACTTACCCTGCTCCTGATTGCA
TGTGTAAAGCTTAATTTGACAACGCTTTGGAGGTTGTAATTTGATCATACGTGATATTTT
ACGTGTATATTTTGTTATGTTTTTGTATTCTAGGATCTTTAGTTGACCATGTTCAGAATA
CAGTACCATAATGATCAAATTCGATATTTTGAATGATCATAGTTGGTAATTAAATGTCTT
TTTCTTATAGG