Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc04g076180.3.1
CDS Infomation	Cell division cycle protein 48 (AHRD V3.3 *** U5FI94_POPTR)
Sequence	ATGTATCCTAAACGATCTGGTCAACCTGATGATGCTGTTTCAGGGCCAGTTCGTACAAGT GACAGGCTTCGGCGAAGGCCAACATTGTATGGTCGCCCGTACTTGTATTATAATCCAAAG CTAATCCGTCCTAAGAGAAACAAGACCAAGACAAGGACTGCAGCGTCTCAGATAGCAAAG ATGTTGCGTCCTGGGAGTCGACCAGTGCGAACAAAAAAATCAGATTCTGTTGCTGCCAAC CTTCGACGCTCTACGAGAACAAGGAGAGTTTCTGTGAACCTTGAAGGATATACAGATAGC TCTGGAACTGAGGATAATGACTTAATGAGCCCGAAGTATCGGAGTTCTAGGAACCGAGAA GATAACAACAGTGCAAGTCAGGATGACCTCATGCCTCGACGTGAAGGACTGCGTCCCCGT CGTGCAGGATTACGACCTCGTCGGGCTAGAGCAGTTGGAAGACAACAGTTAAATCTAAGG TCTGATGATGAACAAGATACTTCAGAAGAGAAGATTGGCCAGGGTGATCCTGAAAATGAA AATGATGTAGATGATAATGATGCTGATGAGGCAGAGGATGAGGGTGGCGGTGACGGTGAT GGAGAGGATGAGGGTGAAGATGAAGGCGATGAAGATGGTGATGATGAAGAGGGTGAAGAA CAGGATGGTAGAAGACGATATGACCTCCGCAACCGAGCTGAGGTACGCAGACTTTCTATG GAAGGTGTTAAACAAAGGCCAAGATCTCCTCGTAGGGTACTTCAGCAAGGGATGGGGACC AAGGTGAACAGAGATGTAAGAAGAGGAGGATCCCGAGTTCATAAACGTCATCGGATGACA CGAGGCGATGACTCTGATGATTCTCTTCTTGTAGATGAGCTGGACGAAGGTCCTCCAATT CCTTGGGGTAGAGGTGGGAGTAGATCTGGACCACCTTGGCTTTTAGGGGGATTAGATATG CAAGGAACAACATCGTGGGGATTAAATGTGGCTGCATCTGGATGGGGTCATCAAAGTGAA GCTTTTACTAATTTGACATCTGGGATTCAAACTGCTGGACCAAGTTCCAAGGGAGGGGCT GATATTCAACCACTGCAAGTGGATGAAACTATAAGCTTTGATGACATTGGTGGGCTTTCT GAATATATTGATGCGCTGAAGGAAATGGTTTTTTTCCCACTATTATATCCAGACTTCTTT GCAAGTTATAACATTACCCCACCAAGGGGAGTTTTATTGTGTGGACCTCCAGGCACAGGT AAAACACTGATCGCCAGAGCATTAGCTTGTGCTGCGTCAAAGGCTGGCCAGAAAGTCAGT TTTTATATGCGGAAGGGTGCTGATGTCCTGAGCAAATGGGTGGGCGAGGCTGAAAGACAG CTAAAATTGTTATTTGAAGAAGCTCAGAGGAACCAGCCTTCCATCATCTTCTTTGATGAG ATTGATGGACTTGCTCCTGTTAGGTCTAGCAAGCAAGAGCAGATTCATAACTCTATTGTG TCAACTTTGCTGGCTTTGATGGATGGCCTTGACTCTCGAGGGCAAGTAGTCTTGATTGGC GCAACCAATCGGGTTGATGCCATTGATGGAGCCTTGAGGCGACCTGGAAGATTTGATCGT GAATTTAATTTTCCTCTACCTGGCCTTGAGGCACGTGCTGAAATATTGGATATTCACACT CGAAAGTGGAAACAGCCTCCTTCTAAGGAACTAAAAATGGAACTTGCAGCTAGTTGCGTG GGATATTGTGGTGCTGATCTGAAGGCATTGTGCACAGAAGCTGCTATTCGTGCATTCCGC GAGAAGTATCCTCAAGTTTACACTAGTGATGACAAGTTCCTGATAGATGTTGAATCAGTT ACGGTGGAAAAGTATCATTTTCTAGAGGCCATGACAACAATCACTCCAGCTGCACATAGA GGCTCAATTGTGCACTCTAGGCCATTATCTTCTGTTGTTGCACCTTGTCTACATGGACCT CTCCGGAAAGCTATGAGCATCATTTCAGATATTTTTCCTCTTTCAGTTTCTTCAGAATTG AGTAAACTTTCCATGCTCTCCTATGGTTCTGCTATTCCTCTTGTGTACAGACCTCGGCTT CTGCTCTGTGGTGGTGAAGGTGTTGGGCTGGATCATGTAGGGCCTGCAATTTTACATGAA CTGGAAAAATTCCCTGTTCACTCGCTTGGACTTCCATCCCTTCTTTCTGACCCTGGGGCC AAGACGCCAGAGGAGGCATTAGTTCACATATTTAGTGAAGCAAGGAGAACAACTCCGTCA ATACTCTATTTACCTCATTTCCATCTTTGGTGGGAGAATGCACACGAGCAGCTCAAAGCT GTTCTCAGGACGCTGTTAGAAGAGCTCCCATCTGACCTGCCTATACTATTATTTGGGACT TCCTCAGTACCACTTTCTGATCTACCTGATGAGCCTTCTTCAGTATTTTCACACCATAGC ATCTTATGTTTGGATTCTCCATCAGATGAAGACAGATCTCTGTTCTTTGATCGTCTTATA GAAGCTGCTTTGTCTATCCAAGTTGAAGCTACAACAAAGAAGTCTGATAAATCGGACTCC CTTCCTGAACTCCCTAAGGCACCAAAGGTGTCTGTTGGACCGAAGGCGTCTGAACTAAAA GCCAAAGCTGAAGCTGAAGGCCATGCCCTTAGGCGATTGAGGATGTGCCTACGAGATGTA TGCAACAGGATTCTGTATGATAAACGGTTTAGCGTCTTCCATTATCCAGTAATGGATGAG GATGCTCCAAACTATCGTTTGATTATCCAGAACCCAATGGACATGGCAACTCTATTGCAG CATGTAGACAGTGGGAAGTATATCACCAACAAAACATTCTTAGAAGACTTTGATCTCATT GTTACCAACGCAAAGAAGTACAATGGAGATGATTACAATGGAGCGAGGATTGTTAGTAGA GCTCATGAACTTCGAGATTCAGTATATGGAATGCTTTCCCAAATGGATCCTGCCTTAGTT GCCTTCTGTGAGAAGATTGCTGCTGAAGGGGGTCCAGTGTCAGTTCCTGACGAATTAGGT GGAGATGCATTGCCACAAAATCCCGTCTTACAGTCATCTACTTTGACTAGAGCAAGAGCC CGCCTTCGTAATGTCCAGCCTGAAGTCAACTTAGATCAGAGCTTTGAAGCATTGAGAAGG CACAAGAAACATGCTGATTCTGCACAATTGGTGCTAGATGATGAATTACAACCTCAGGAT TCATTGCCTTCCAAGTCATCTAATGACCATGAAGGAGATGCTTCAGACCAAAGGCCAGAA AGCACTCTTGCTGACGGTAATAAATCCGCAGACGTTCCAGATGCAAGTGGAGACGCATGC CAAGATGTTACAATGTCAGACACAGAAATGTCCCGTAAAATCGAGTCCGTGAAGAAGCAA TTCGTGAAGCACACAAAGGAGTACGGCATTCCTCAGCTAGAAAGATTATACACTCGCATC ATGAAGGGTGTTTTCGAAACGAAAACTGGTGTGACAAACGAAGATCTCAAGACTTCAATT TTGAGTTTCTTGTTAAAATTTGCAAAGGATGCGTCGAAGTTTTAG

Peptide Sequence

PEP ID	Solyc04g076180.3.1
PEP Infomation	Cell division cycle protein 48 (AHRD V3.3 *** U5FI94_POPTR)
Sequence	MYPKRSGQPDDAVSGPVRTSDRLRRRPTLYGRPYLYYNPKLIRPKRNKTKTRTAASQIAK MLRPGSRPVRTKKSDSVAANLRRSTRTRRVSVNLEGYTDSSGTEDNDLMSPKYRSSRNRE DNNSASQDDLMPRREGLRPRRAGLRPRRARAVGRQQLNLRSDDEQDTSEEKIGQGDPENE NDVDDNDADEAEDEGGGDGDGEDEGEDEGDEDGDDEEGEEQDGRRRYDLRNRAEVRRLSM EGVKQRPRSPRRVLQQGMGTKVNRDVRRGGSRVHKRHRMTRGDDSDDSLLVDELDEGPPI PWGRGGSRSGPPWLLGGLDMQGTTSWGLNVAASGWGHQSEAFTNLTSGIQTAGPSSKGGA DIQPLQVDETISFDDIGGLSEYIDALKEMVFFPLLYPDFFASYNITPPRGVLLCGPPGTG KTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDE IDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDR EFNFPLPGLEARAEILDIHTRKWKQPPSKELKMELAASCVGYCGADLKALCTEAAIRAFR EKYPQVYTSDDKFLIDVESVTVEKYHFLEAMTTITPAAHRGSIVHSRPLSSVVAPCLHGP LRKAMSIISDIFPLSVSSELSKLSMLSYGSAIPLVYRPRLLLCGGEGVGLDHVGPAILHE LEKFPVHSLGLPSLLSDPGAKTPEEALVHIFSEARRTTPSILYLPHFHLWWENAHEQLKA VLRTLLEELPSDLPILLFGTSSVPLSDLPDEPSSVFSHHSILCLDSPSDEDRSLFFDRLI EAALSIQVEATTKKSDKSDSLPELPKAPKVSVGPKASELKAKAEAEGHALRRLRMCLRDV CNRILYDKRFSVFHYPVMDEDAPNYRLIIQNPMDMATLLQHVDSGKYITNKTFLEDFDLI VTNAKKYNGDDYNGARIVSRAHELRDSVYGMLSQMDPALVAFCEKIAAEGGPVSVPDELG GDALPQNPVLQSSTLTRARARLRNVQPEVNLDQSFEALRRHKKHADSAQLVLDDELQPQD SLPSKSSNDHEGDASDQRPESTLADGNKSADVPDASGDACQDVTMSDTEMSRKIESVKKQ FVKHTKEYGIPQLERLYTRIMKGVFETKTGVTNEDLKTSILSFLLKFAKDASKF*

Transcript Sequence

Transcript ID	Solyc04g076180.3.1
Transcript Infomation	Cell division cycle protein 48 (AHRD V3.3 *** U5FI94_POPTR)
Sequence	ATATAGATTGCATTGTTTCATTTCAGAAGAGAAAACTGAAAAATAAAATTAGTAATAATG AAGATATCATGTCATTTACATTAAAAAATCAAGTGCAAAAAATCCTTTTGATAAGCGTTA ATTTTGGCTAAATTTTAAAATAAAATAAAATAAAAAATTACTATTTTTTTGTTTTAACTT GTTTGTCTATTTCTAACCAAAAGAAAATAAGAAGAACAAATTAAAAATAAGAACTATATA AACATTGTTCTAACTAATTTTTTTTTTGATAAAGTCGAAAGTGCCCCTAAACAACTCAGC AAAAGTTTATTACGGGTCGGGTCAATCCGGTTGAGTCCGCCCTATATTAACAAACAATCG AAACGTACTCTTTGTTTCCTGGTCACCAACAACACTCTTCTCAGTCGTCCCTCTTTGCTG CTGAAGAACGCCGGCGACAAGCGACGGTGCCGGATTTCTCATCGAATTGTAGCATTCACA TTAGAATCTTCATATCTGAACTCTATTTTGTGTGTTCACTTGCTTACTTCGCCCTGTTAT CCCTTTCTGGGTAGAGGGTATATCTCCATGGGGAGACATTTGTAACCAAAATGTATCCTA AACGATCTGGTCAACCTGATGATGCTGTTTCAGGGCCAGTTCGTACAAGTGACAGGCTTC GGCGAAGGCCAACATTGTATGGTCGCCCGTACTTGTATTATAATCCAAAGCTAATCCGTC CTAAGAGAAACAAGACCAAGACAAGGACTGCAGCGTCTCAGATAGCAAAGATGTTGCGTC CTGGGAGTCGACCAGTGCGAACAAAAAAATCAGATTCTGTTGCTGCCAACCTTCGACGCT CTACGAGAACAAGGAGAGTTTCTGTGAACCTTGAAGGATATACAGATAGCTCTGGAACTG AGGATAATGACTTAATGAGCCCGAAGTATCGGAGTTCTAGGAACCGAGAAGATAACAACA GTGCAAGTCAGGATGACCTCATGCCTCGACGTGAAGGACTGCGTCCCCGTCGTGCAGGAT TACGACCTCGTCGGGCTAGAGCAGTTGGAAGACAACAGTTAAATCTAAGGTCTGATGATG AACAAGATACTTCAGAAGAGAAGATTGGCCAGGGTGATCCTGAAAATGAAAATGATGTAG ATGATAATGATGCTGATGAGGCAGAGGATGAGGGTGGCGGTGACGGTGATGGAGAGGATG AGGGTGAAGATGAAGGCGATGAAGATGGTGATGATGAAGAGGGTGAAGAACAGGATGGTA GAAGACGATATGACCTCCGCAACCGAGCTGAGGTACGCAGACTTTCTATGGAAGGTGTTA AACAAAGGCCAAGATCTCCTCGTAGGGTACTTCAGCAAGGGATGGGGACCAAGGTGAACA GAGATGTAAGAAGAGGAGGATCCCGAGTTCATAAACGTCATCGGATGACACGAGGCGATG ACTCTGATGATTCTCTTCTTGTAGATGAGCTGGACGAAGGTCCTCCAATTCCTTGGGGTA GAGGTGGGAGTAGATCTGGACCACCTTGGCTTTTAGGGGGATTAGATATGCAAGGAACAA CATCGTGGGGATTAAATGTGGCTGCATCTGGATGGGGTCATCAAAGTGAAGCTTTTACTA ATTTGACATCTGGGATTCAAACTGCTGGACCAAGTTCCAAGGGAGGGGCTGATATTCAAC CACTGCAAGTGGATGAAACTATAAGCTTTGATGACATTGGTGGGCTTTCTGAATATATTG ATGCGCTGAAGGAAATGGTTTTTTTCCCACTATTATATCCAGACTTCTTTGCAAGTTATA ACATTACCCCACCAAGGGGAGTTTTATTGTGTGGACCTCCAGGCACAGGTAAAACACTGA TCGCCAGAGCATTAGCTTGTGCTGCGTCAAAGGCTGGCCAGAAAGTCAGTTTTTATATGC GGAAGGGTGCTGATGTCCTGAGCAAATGGGTGGGCGAGGCTGAAAGACAGCTAAAATTGT TATTTGAAGAAGCTCAGAGGAACCAGCCTTCCATCATCTTCTTTGATGAGATTGATGGAC TTGCTCCTGTTAGGTCTAGCAAGCAAGAGCAGATTCATAACTCTATTGTGTCAACTTTGC TGGCTTTGATGGATGGCCTTGACTCTCGAGGGCAAGTAGTCTTGATTGGCGCAACCAATC GGGTTGATGCCATTGATGGAGCCTTGAGGCGACCTGGAAGATTTGATCGTGAATTTAATT TTCCTCTACCTGGCCTTGAGGCACGTGCTGAAATATTGGATATTCACACTCGAAAGTGGA AACAGCCTCCTTCTAAGGAACTAAAAATGGAACTTGCAGCTAGTTGCGTGGGATATTGTG GTGCTGATCTGAAGGCATTGTGCACAGAAGCTGCTATTCGTGCATTCCGCGAGAAGTATC CTCAAGTTTACACTAGTGATGACAAGTTCCTGATAGATGTTGAATCAGTTACGGTGGAAA AGTATCATTTTCTAGAGGCCATGACAACAATCACTCCAGCTGCACATAGAGGCTCAATTG TGCACTCTAGGCCATTATCTTCTGTTGTTGCACCTTGTCTACATGGACCTCTCCGGAAAG CTATGAGCATCATTTCAGATATTTTTCCTCTTTCAGTTTCTTCAGAATTGAGTAAACTTT CCATGCTCTCCTATGGTTCTGCTATTCCTCTTGTGTACAGACCTCGGCTTCTGCTCTGTG GTGGTGAAGGTGTTGGGCTGGATCATGTAGGGCCTGCAATTTTACATGAACTGGAAAAAT TCCCTGTTCACTCGCTTGGACTTCCATCCCTTCTTTCTGACCCTGGGGCCAAGACGCCAG AGGAGGCATTAGTTCACATATTTAGTGAAGCAAGGAGAACAACTCCGTCAATACTCTATT TACCTCATTTCCATCTTTGGTGGGAGAATGCACACGAGCAGCTCAAAGCTGTTCTCAGGA CGCTGTTAGAAGAGCTCCCATCTGACCTGCCTATACTATTATTTGGGACTTCCTCAGTAC CACTTTCTGATCTACCTGATGAGCCTTCTTCAGTATTTTCACACCATAGCATCTTATGTT TGGATTCTCCATCAGATGAAGACAGATCTCTGTTCTTTGATCGTCTTATAGAAGCTGCTT TGTCTATCCAAGTTGAAGCTACAACAAAGAAGTCTGATAAATCGGACTCCCTTCCTGAAC TCCCTAAGGCACCAAAGGTGTCTGTTGGACCGAAGGCGTCTGAACTAAAAGCCAAAGCTG AAGCTGAAGGCCATGCCCTTAGGCGATTGAGGATGTGCCTACGAGATGTATGCAACAGGA TTCTGTATGATAAACGGTTTAGCGTCTTCCATTATCCAGTAATGGATGAGGATGCTCCAA ACTATCGTTTGATTATCCAGAACCCAATGGACATGGCAACTCTATTGCAGCATGTAGACA GTGGGAAGTATATCACCAACAAAACATTCTTAGAAGACTTTGATCTCATTGTTACCAACG CAAAGAAGTACAATGGAGATGATTACAATGGAGCGAGGATTGTTAGTAGAGCTCATGAAC TTCGAGATTCAGTATATGGAATGCTTTCCCAAATGGATCCTGCCTTAGTTGCCTTCTGTG AGAAGATTGCTGCTGAAGGGGGTCCAGTGTCAGTTCCTGACGAATTAGGTGGAGATGCAT TGCCACAAAATCCCGTCTTACAGTCATCTACTTTGACTAGAGCAAGAGCCCGCCTTCGTA ATGTCCAGCCTGAAGTCAACTTAGATCAGAGCTTTGAAGCATTGAGAAGGCACAAGAAAC ATGCTGATTCTGCACAATTGGTGCTAGATGATGAATTACAACCTCAGGATTCATTGCCTT CCAAGTCATCTAATGACCATGAAGGAGATGCTTCAGACCAAAGGCCAGAAAGCACTCTTG CTGACGGTAATAAATCCGCAGACGTTCCAGATGCAAGTGGAGACGCATGCCAAGATGTTA CAATGTCAGACACAGAAATGTCCCGTAAAATCGAGTCCGTGAAGAAGCAATTCGTGAAGC ACACAAAGGAGTACGGCATTCCTCAGCTAGAAAGATTATACACTCGCATCATGAAGGGTG TTTTCGAAACGAAAACTGGTGTGACAAACGAAGATCTCAAGACTTCAATTTTGAGTTTCT TGTTAAAATTTGCAAAGGATGCGTCGAAGTTTTAGTATAAACATGAATAGTTATTTTATT TTATTTTTTAGTTTCAACAATTGATTGATCCCCTCATACGATGTCAACGAATTTGCTGTG CTACACAGGCAAAAGAAAAGAAAATTATAGTCTTATTTCTTGCCCCCTCTTCTGCTCTTA TACATGAACAATTGATCTAAAGGGGTATTGAACAATACTGGAGCTACCAATTCACATTTG ATAAAGTGATTTGGAATTGCAAAGACATCAATACAAAATTGAATCGAAGGTCAAGTTCTG AGTGGGACTCGACACAAAGGAGGGCGGGTTACAGAGAAGGACTCGAATCTAGTTACAAAG TTCGCGAGCAATTCCCAAACGCGAATTAGCTGTGTCAAACAGAATCCTCAGGTTCTGCTG CTGCAAATTGGCTATAACATTCAACACAGAGTTCACATTTGTTGGTGCTGCTGCCATTGC TAGACATGCCAAAGGACTTGCACTACTATGAATCAAACTGTTCTCCATTGGCAACACCAA ATCCATCCCTGTAAAGTGAAGTATAATAGCTGGTGCCACTGCTTCATTTGTTGATGCAAA ACATGTGTCAAATGCACCCAATGAGGTAAATGGTCCTTTCACTTGATTCCTAAATTCATC CCTAATTGCATTATAAATTGGCTGAACGAATCGGGTTATAACCGTACCCGAGTCGATTAT AGTACCCGCACCGGTATTCGGGTCAAATGCTAGAAGCTCAGGAGCTATCGGGACCAGGAC GCGACCCACACTTATGCCGGTTAGGTTCACGTAGTACAGAGAGGGTCTGTGCGGGTTCTT AAGAAGTGGGGTGGTTCTAATGTTCTTCGGTTGACCCAATGGACCGAGTTTGAGTGATCC AGAGAAATAATAAGATTTGAAACTCGGTAAACAGTATGAGAATACACCAGAGTAGAGTGA CATGGATTGTGAGAGTAGTGACATGGAGCCCCTACCCAAGCCCAATAACCCTTGGGGGGG GATTGAGCTCCCGGACACAGCACTGATGCAACCGAATGAATAATTCGGTATAACATCAGC ACCTAGTCTAAGTGAATCACGTGACAGCGTGGCGTAGAACGACGAAGCTCCACCATAGGA TTGGTTGAAAAAACAAGCACCCGGTGCACCAGCAGCGGGGCAAGATTGCCCCTTAACCTG TGTGCATTCGGGTACAGAGCAACCCATCGACCCATAAGTCGACGAGATATTGGGAGTAAA TACACTAGAGGTACAGCCAGTACAGCCACTGCATGGAACCCATGCAGTGTCACTACTGGT ATCCAGGACCATAAACATTAGCTGGCCGGGGGTACCGATTTTAGCCCGAACAACATAGTT ACCAATGTTGAATACTTGTTGGCCTGAAGCAATAGGGGCTGAATTAGGCTTTTGGGCTAC TAAACTAGACAAATAAGAAAGTCTTTGTGGATCTTTAGAGGCCATGTTGATAAGTGTGTT TTCCCAAGATGTAGGTTTTGGTGTGTTGAAAGGTGAGCATTTGCCATAAATGGGAATGAC TGAAAGTTGTTCATTAGATGGACATGAATCAAAAGCTAAAGTTTTTGTTGTTGAAAGAAG AGTGATGAAGAGGAATGTAGCAATGGCCAAAGCCATGGTGTGCTTTTTCCTTATCAACAA CCCTGAAAAGATAAAGAGTTTTGGTGAGATTTATGTCAAATATGATAGAAACAAGAATAT ATATATAGGACACCCCCAAACCCTTCAAATCTCACCCCCCATGAAGGTGTGAGTTGGGGT GGTAGGCAAC