Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g076090.3.1
CDS Infomation

glucose-6-phosphate isomerase
Sequence

ATGGCTTCTTCTTCTCTATCTAGCATCTATTCACCTTCTTCATCTTTCAAATCTGAAGTG
AAATCCATTCACAAAATCACTTCTTCCCAATTGGGTTCAATTTATTTGCCCAATAAATCA
AGATTCCATGTTCACGCGGTGGCGCGTGAGGTTTCAGCGAGCTTGTCGGCCGGAAACAAT
GACGTGGTACATAAGTTGAAGAAGGAGAATGTTGGGTTGGAGAAAAACCCGAATGCTCTA
TGGAAGAGATATGTTGAGTGGCTTTATCAGCACAAGGAGTTGGGTTTGTATTTGGATATC
AGTCGGGTTGGATTCAGTGATGGGTTTCTTGAGGAAATGGAGCCTCGTTTGCAGAAGGCG
TTTAAGGATATGGTGGATTTGGAGAAGGGGGCTATTGCAAACCCTGATGAGGGTAGAATG
GTGGGTCACTATTGGTTGAGAAGTCCTCATCTTGCTCCCAACTCATTTCTCAGGTTGCAG
ATTGAGAATACTCTTGAAGCTGTGTGTGAGTTTGCAAATGATGTCGTCAGTGGTAAGGTT
AAGACTCCTTCTGGAGGCCGATTTACGCAAATTCTCTCTGTTGGAATTGGTGGTTCAGCT
CTTGGACCACAATTTGTGGCTGAGGCATTGGCACCTGACAACCCTCCTCTGAAGATAAGA
TTTATCGACAATACAGATCCAGCAGGCATTGATCATCAAATTGCGCAACTTGGCCCTGAG
CTGGCTTCAACACTTGTTATTGTTATTTCAAAGAGTGGAGGCACTCCAGAAACCCGAAAT
GGCTTGCTAGAAGTTCAGAAGGCCTTCCGTGAAGCTGGCCTGATATTCGCGAAACAGGGT
GTTGCCATTACACAAGAAAACTCATTGCTTGACAACACTGCTAGAATTGAGGGTTGGTTG
GCCAGATTCCCTATGTTTGATTGGGTGGGCGGAAGAACCTCAGAAATGTCTGCAGTTGGT
CTACTTCCAGCTGCACTTCAGGGAATTGATATTAGAGAGATGCTCGCTGGTGCTGCATTG
ATGGATGAAGCAAACAGGACCACTGTGGTTCGGGATAACCCGGCAGCGTTACTTGCTTTG
TGTTGGTACTGGGCAACTGATGGAGTTGGATCCAAGGATATGGTTGTCCTCCCATACAAG
GACAGTTTATTACTATTCAGTAGGTATTTACAGCAGCTTGTCATGGAGTCTCTTGGGAAA
GAGTTTGACCTGGACGGTAACCGGGTGAATCAAGGTATCAGCGTTTATGGAAACAAAGGG
AGCACAGATCAACATGCCTATATTCAACAACTACGAGAAGGTGTGCACAATTTCTTTGCG
ACATTTATTGAAGTATTGCGTGATAGGCCCCCTGGTCATGATTGGGAGCTTGAACCTGGC
GTTACTTGTGGCGACTACCTCTTTGGAATGTTACAGGGAACAAGGTCAGCTCTGTATTCG
AACGATCGGGAGTCCATCACAGTCACTGTGCAGGAAGTGACACCTAGATCTGTTGGAGCT
CTAGTAGCACTCTATGAGCGAGCTGTTGGGATTTATGCTTCACTTGTCAACATTAACGCT
TATCATCAACCTGGTGTGGAAGCTGGGAAAAAAGCTGCTGGAGAAGTTCTTGCTCTTCAA
AAGCGTGTCCTTCAAGTACTTAATGAGGCCAGCTGTAAACAGCCTGTTGAACCACTTACT
CTGGATGAAATAGCTGAACGTTGTCATTGTGAAGACGATATTGAAATGATCTATAAGATT
ATTGCACACATGGCTGCTAATGACAGAGCACTTATTGCCGAAGGTAATTGTGGTACTCCT
CACAGCATAAAAGTTTATCTGGGAGAGTGCAATGTTGACGACTTGTATGCCTAG

Peptide Sequence

PEP ID

Solyc04g076090.3.1
PEP Infomation

glucose-6-phosphate isomerase
Sequence

MASSSLSSIYSPSSSFKSEVKSIHKITSSQLGSIYLPNKSRFHVHAVAREVSASLSAGNN
DVVHKLKKENVGLEKNPNALWKRYVEWLYQHKELGLYLDISRVGFSDGFLEEMEPRLQKA
FKDMVDLEKGAIANPDEGRMVGHYWLRSPHLAPNSFLRLQIENTLEAVCEFANDVVSGKV
KTPSGGRFTQILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLGPE
LASTLVIVISKSGGTPETRNGLLEVQKAFREAGLIFAKQGVAITQENSLLDNTARIEGWL
ARFPMFDWVGGRTSEMSAVGLLPAALQGIDIREMLAGAALMDEANRTTVVRDNPAALLAL
CWYWATDGVGSKDMVVLPYKDSLLLFSRYLQQLVMESLGKEFDLDGNRVNQGISVYGNKG
STDQHAYIQQLREGVHNFFATFIEVLRDRPPGHDWELEPGVTCGDYLFGMLQGTRSALYS
NDRESITVTVQEVTPRSVGALVALYERAVGIYASLVNINAYHQPGVEAGKKAAGEVLALQ
KRVLQVLNEASCKQPVEPLTLDEIAERCHCEDDIEMIYKIIAHMAANDRALIAEGNCGTP
HSIKVYLGECNVDDLYA*

Transcript Sequence

Transcript ID

Solyc04g076090.3.1
Transcript Infomation

glucose-6-phosphate isomerase
Sequence

CAACTTCTTGTTTTACACTTTGAAATATTTAATACTGTCACATACAATGCCCTGTATACA
AAAAGTAGTAGTAGTAAAATATCAACCAACAATGACCATCACAGCACTAGTTTAGTATAC
AAAGGAACCCCCTTTACCTTCCAAAAGCCAAATAAACCAAAAGGGACTTTGTTTTTTTCA
ACTATGGCTTCTTGATCTCTCTTTCTCCTTGTTTATATCGCTTCTTAATTTGCTTTTACA
GCTCTTTTTTTAATTGGGTGTGTGGAATTAATGGCTTCTTCTTCTCTATCTAGCATCTAT
TCACCTTCTTCATCTTTCAAATCTGAAGTGAAATCCATTCACAAAATCACTTCTTCCCAA
TTGGGTTCAATTTATTTGCCCAATAAATCAAGATTCCATGTTCACGCGGTGGCGCGTGAG
GTTTCAGCGAGCTTGTCGGCCGGAAACAATGACGTGGTACATAAGTTGAAGAAGGAGAAT
GTTGGGTTGGAGAAAAACCCGAATGCTCTATGGAAGAGATATGTTGAGTGGCTTTATCAG
CACAAGGAGTTGGGTTTGTATTTGGATATCAGTCGGGTTGGATTCAGTGATGGGTTTCTT
GAGGAAATGGAGCCTCGTTTGCAGAAGGCGTTTAAGGATATGGTGGATTTGGAGAAGGGG
GCTATTGCAAACCCTGATGAGGGTAGAATGGTGGGTCACTATTGGTTGAGAAGTCCTCAT
CTTGCTCCCAACTCATTTCTCAGGTTGCAGATTGAGAATACTCTTGAAGCTGTGTGTGAG
TTTGCAAATGATGTCGTCAGTGGTAAGGTTAAGACTCCTTCTGGAGGCCGATTTACGCAA
ATTCTCTCTGTTGGAATTGGTGGTTCAGCTCTTGGACCACAATTTGTGGCTGAGGCATTG
GCACCTGACAACCCTCCTCTGAAGATAAGATTTATCGACAATACAGATCCAGCAGGCATT
GATCATCAAATTGCGCAACTTGGCCCTGAGCTGGCTTCAACACTTGTTATTGTTATTTCA
AAGAGTGGAGGCACTCCAGAAACCCGAAATGGCTTGCTAGAAGTTCAGAAGGCCTTCCGT
GAAGCTGGCCTGATATTCGCGAAACAGGGTGTTGCCATTACACAAGAAAACTCATTGCTT
GACAACACTGCTAGAATTGAGGGTTGGTTGGCCAGATTCCCTATGTTTGATTGGGTGGGC
GGAAGAACCTCAGAAATGTCTGCAGTTGGTCTACTTCCAGCTGCACTTCAGGGAATTGAT
ATTAGAGAGATGCTCGCTGGTGCTGCATTGATGGATGAAGCAAACAGGACCACTGTGGTT
CGGGATAACCCGGCAGCGTTACTTGCTTTGTGTTGGTACTGGGCAACTGATGGAGTTGGA
TCCAAGGATATGGTTGTCCTCCCATACAAGGACAGTTTATTACTATTCAGTAGGTATTTA
CAGCAGCTTGTCATGGAGTCTCTTGGGAAAGAGTTTGACCTGGACGGTAACCGGGTGAAT
CAAGGTATCAGCGTTTATGGAAACAAAGGGAGCACAGATCAACATGCCTATATTCAACAA
CTACGAGAAGGTGTGCACAATTTCTTTGCGACATTTATTGAAGTATTGCGTGATAGGCCC
CCTGGTCATGATTGGGAGCTTGAACCTGGCGTTACTTGTGGCGACTACCTCTTTGGAATG
TTACAGGGAACAAGGTCAGCTCTGTATTCGAACGATCGGGAGTCCATCACAGTCACTGTG
CAGGAAGTGACACCTAGATCTGTTGGAGCTCTAGTAGCACTCTATGAGCGAGCTGTTGGG
ATTTATGCTTCACTTGTCAACATTAACGCTTATCATCAACCTGGTGTGGAAGCTGGGAAA
AAAGCTGCTGGAGAAGTTCTTGCTCTTCAAAAGCGTGTCCTTCAAGTACTTAATGAGGCC
AGCTGTAAACAGCCTGTTGAACCACTTACTCTGGATGAAATAGCTGAACGTTGTCATTGT
GAAGACGATATTGAAATGATCTATAAGATTATTGCACACATGGCTGCTAATGACAGAGCA
CTTATTGCCGAAGGTAATTGTGGTACTCCTCACAGCATAAAAGTTTATCTGGGAGAGTGC
AATGTTGACGACTTGTATGCCTAGATCTTGCATTGAACATTCTGATGTTTCTACATACAT
CCGAGAAATACATATGTGCCCAAGATAGGGTCCGGCCTTATGGTGGCTGATTATTGGGGA
TTCCTAACTTAAAATATCCATTTTTTTTTCTTTTCAAAGCACCATCATGTTCACATCTGT
TAGCTGTATCAGAGAGCATATTGCTTCCCCATGATCAAATAAATTTCAGAAAGCTGAGTT
TGTTGACACTGCTGCTGTTTATAATATGCTTTTCATCACCCTCTTTTTTCTTATTGATTT
GGACATACATACTACTAGTGAAACCAACCAATTGTTTTCTATTGTTACGTCGTGATCTTG
GCCTG