Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc04g074320.2.1
CDS Infomation	Protein TRANSPARENT TESTA 1-like protein (AHRD V3.3 *** A0A0B0MYQ3_GOSAR)
Sequence	ATGTCAAATTATGAAGAAAACCCTAATTGGAACAATATTGAAGATGATGTGACTGTTGCG TTACACATTGGTCTTCCAAATTCTAGCAATAATAATAATAATATTCCAATTGATCACAAC AAAAGTGATGGAAATATTATTGGAGCAACCACTCAATATTGGATACCAACTCCTTCACAA ATCCTTGTTGGCTTCACCCATTTTTCTTGTCACATTTGTCACAAAACTTTCAATCGTTAC AACAATCTTCAGATGCACATGTGGGGTCATGGATCACAATATAGAAAAGGACCAGAATCA CTTAAAGGAACACAACCAAGAGCCATGTTAGGGATCCCATGCTATTGTTGTGAAGAAGGG TGCAAAAACAACATAAATCATTCTAGGGCTAAGCCATTGAAGGATTTTAGAACCCTACAA ACACATTACAAGAGGAAGCATGGAACAAAGCGATTCGCGTGTAGAAAATGTGGCAAGTGT TTAGCTGTGAAAGGAGACTGGAGAACACACGAAAAAAATTGTGGAAAACGTTGGCTATGT GTTTGTGGTTCCGATTTTAAACACAAGAGATCTTTGAAGGATCATATCGCGTCGTTTGGA GAAGGTCACGGGGCTTCTTCTCCTGCTAATAATAATTCATTTGATGGAGTTGAAGTTCAG AGATCAGCAAATTTTTACGTCTGA

Peptide Sequence

PEP ID	Solyc04g074320.2.1
PEP Infomation	Protein TRANSPARENT TESTA 1-like protein (AHRD V3.3 *** A0A0B0MYQ3_GOSAR)
Sequence	MSNYEENPNWNNIEDDVTVALHIGLPNSSNNNNNIPIDHNKSDGNIIGATTQYWIPTPSQ ILVGFTHFSCHICHKTFNRYNNLQMHMWGHGSQYRKGPESLKGTQPRAMLGIPCYCCEEG CKNNINHSRAKPLKDFRTLQTHYKRKHGTKRFACRKCGKCLAVKGDWRTHEKNCGKRWLC VCGSDFKHKRSLKDHIASFGEGHGASSPANNNSFDGVEVQRSANFYV*

Transcript Sequence

Transcript ID	Solyc04g074320.2.1
Transcript Infomation	Protein TRANSPARENT TESTA 1-like protein (AHRD V3.3 *** A0A0B0MYQ3_GOSAR)
Sequence	CTAACACACGCCTATCCCAAAACCGACTTTTCTTTTCAACGTTATTAAGAAAACAACTAA TAAAAATGAGGATTAACACATGCATTATTAAGAGAGACACCTTTTTAGGGATTATCGGTC CTTAATTAGCAATTTGGAGTTAAATAAACGATTATCTACCACCTGTAAACCTACATCAAG AAAGCCGTTGAATTATTGAAGAAAGTATGATTAAAAAAGAAAAAAAAATTAAATTATATA CATTGTTAGTGCGTAAAAATATATTTATATTTTACTATCATGTTCAAAAAGCGGAGCTAG AAATTATTAGTTATGGGTTCAAATCATTGTTATTAGTCGCTTCCCAAGGTTATTATACAA CCATTTCCAACACGTGAGGCTTATATATAAGTAATAATTTATTTTTTGCCTGACCTAATT GATGGGTGATCTAACTTTTTTTATCGTCAGAATTTATATAACTAAATAAACATTAAAATT AAATAATATTTGTGATTAAGATGTTGCCATAAATCTAAATACCACTGCAGTAAACCTCAT GTAAATTATAGAAGCCATGGTCCACCACAATTAAGTCTTATTACATTGTATACCAAAAGG AGATAAATTTGACAAGCAGCTAAGATTAACTATCTTTTCCCTTAAAACAAATTACTAATT AATGTTATTTACATTCAACGACCAACAACATACCCCATTTTCTCCAGTGTCTTTTTTCTC ACAATTTTTCCCTCTAAAAGATTAACTTTTAAATTCAACCTTAAAGACAAACATTCTTCC TAGGCCTATAAAAACACCTTGAATATCATAGGTTACTTCATTCTTTCACTCAAAAATAAA AATAAAAAAATAAAAAATGGAACACTCATATTTTGCTTCGTCTTCTAGGTCTATTGAAAA TCAAATTGAACCATTTGATTTTTTTGCAGATAAAACCCAAAATGCATTTGAATTTCTTAG TTTGTCTCAACCATCTAATCAAAATATTGAGAAAATGTCAAATTATGAAGAAAACCCTAA TTGGAACAATATTGAAGATGATGTGACTGTTGCGTTACACATTGGTCTTCCAAATTCTAG CAATAATAATAATAATATTCCAATTGATCACAACAAAAGTGATGGAAATATTATTGGAGC AACCACTCAATATTGGATACCAACTCCTTCACAAATCCTTGTTGGCTTCACCCATTTTTC TTGTCACATTTGTCACAAAACTTTCAATCGTTACAACAATCTTCAGATGCACATGTGGGG TCATGGATCACAATATAGAAAAGGACCAGAATCACTTAAAGGAACACAACCAAGAGCCAT GTTAGGGATCCCATGCTATTGTTGTGAAGAAGGGTGCAAAAACAACATAAATCATTCTAG GGCTAAGCCATTGAAGGATTTTAGAACCCTACAAACACATTACAAGAGGAAGCATGGAAC AAAGCGATTCGCGTGTAGAAAATGTGGCAAGTGTTTAGCTGTGAAAGGAGACTGGAGAAC ACACGAAAAAAATTGTGGAAAACGTTGGCTATGTGTTTGTGGTTCCGATTTTAAACACAA GAGATCTTTGAAGGATCATATCGCGTCGTTTGGAGAAGGTCACGGGGCTTCTTCTCCTGC TAATAATAATTCATTTGATGGAGTTGAAGTTCAGAGATCAGCAAATTTTTACGTCTGATA TGCACATTGGAAGTTTCTTTAACAAGAATTATCAATAACAAGTTTTCTTTTGGGTATATT TGTGTGTTATGAATTGAAACTGATAGACAAATTAGCAAACGTATCAAAATATATGCACTT ATTTTTGGTGCAACTTATATTCATGTGCATGAAAATCTCCGAATTTGTATGAAAAATT