Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g073950.1.1
CDS Infomation

VQ motif-containing family protein (AHRD V3.3 *** B9H742_POPTR)
Sequence

ATGGATTCTGGGAATAGTGGGAGTATGCAATCTTCAAGTGGTGGTGATGAAGATTATGAT
GATTCACGTGGAGAATCTATTTCTACTTTTTTGAATAATAGTAGTAATAATAATTCACTT
GCCCATTTTGGTTCAATTCCATCTCATAATAATAGTAATAATCCTTCTTTTCTTTCTCAT
CACCATCAACAACACAACCCGAATAATACTTTCTTTGATACTGCTGCTAGTTTGTTCCCA
CAAAGTTCAAATCCTCCGTTCAACGCGAACGATCTCATTTGGTCATCATCATCAACAACA
TCGTCATCTCGGGCTTTAAGATCTGATCAGAGTTTGAATTTTATCTCATCAGCTCCATCA
TCAAATGTTACTGCTAGTGGTCAACTCTTTCATCATCCTAATCAAAACCCTTTTCCGGGT
TCAAGTTCGTTACAAGCAATGCAACAACCATCCATGGAACCAACGAATGTTGCACGGGCC
TCAAGCTCGGCCCAGCCCGATCAACAGCCCAATGTAGCGAAGAACCCGAAGAAACGCACA
AGAGCCTCACGGAGAGCGCCAACCACCGTGCTAACTACAGACACGACGAATTTTCGACAA
ATGGTTCAGGAATTCACCGGAATCCCTACGGCTCCGTTCACTGGTTCACCCTATACTCGC
CGTCTTGATCTGTTTTCGACAGCTGGATCGGGGATGAGGACGGGACATTTGGATTCACTT
GGACCATTATACCCTTTAAGGCCATCAGCACAAAAGGTTCAAGTATCTCCATTTATGTCA
CAATTATCATCTCCTCCTGCATCTTCGTTGAGTTCTAGCATGATTGATGCTTTAATGCCT
GGAAATAACAACTCTATGGTTGGTACTACCTCGGGCTCTACCTCTACTTCAACAAATTTC
CAGTTAGGTAATTCAAATCATGTTGGAATACAAAAACAAGCGCAAAACTTGTTCAACATG
CAGAATCAAATTCTTTCATTCAATACTGGATCAACCATTTTCAACACAAAGCCTTCAGGA
GGCGGAAGCAGTACTACGATGAATGTTCCTTCGTTAGATGAACTTGGAATAAGTCATGAG
CAACAAGTGAGTGCAAATCTGATCAGTGGATTTCAAGGAGGGAATAATAGTAATAATAAT
GTTAGTAGTCAAGGAAGAAATGATGGAAATAATCTTTCAAGATTGTGGAGAAATAGTAAT
AATAATCATGATGGGGGTCAAGAAAATCAACGGCTGAGATCATTCGATGGGAATAATAGT
AATGCTGGAAACTACAACAAGTTAAATTCAGGTAATTCTTCAACATCAGAATTTCATCCT
GAGATTAATAACGGTTTGGAAAATGTGTGTTCTACTGGTGAAGGACCAGTTTCTTCATGG
ACTTGTCCTGATTGA

Peptide Sequence

PEP ID

Solyc04g073950.1.1
PEP Infomation

VQ motif-containing family protein (AHRD V3.3 *** B9H742_POPTR)
Sequence

MDSGNSGSMQSSSGGDEDYDDSRGESISTFLNNSSNNNSLAHFGSIPSHNNSNNPSFLSH
HHQQHNPNNTFFDTAASLFPQSSNPPFNANDLIWSSSSTTSSSRALRSDQSLNFISSAPS
SNVTASGQLFHHPNQNPFPGSSSLQAMQQPSMEPTNVARASSSAQPDQQPNVAKNPKKRT
RASRRAPTTVLTTDTTNFRQMVQEFTGIPTAPFTGSPYTRRLDLFSTAGSGMRTGHLDSL
GPLYPLRPSAQKVQVSPFMSQLSSPPASSLSSSMIDALMPGNNNSMVGTTSGSTSTSTNF
QLGNSNHVGIQKQAQNLFNMQNQILSFNTGSTIFNTKPSGGGSSTTMNVPSLDELGISHE
QQVSANLISGFQGGNNSNNNVSSQGRNDGNNLSRLWRNSNNNHDGGQENQRLRSFDGNNS
NAGNYNKLNSGNSSTSEFHPEINNGLENVCSTGEGPVSSWTCPD*

Transcript Sequence

Transcript ID

Solyc04g073950.1.1
Transcript Infomation

VQ motif-containing family protein (AHRD V3.3 *** B9H742_POPTR)
Sequence

ATGGATTCTGGGAATAGTGGGAGTATGCAATCTTCAAGTGGTGGTGATGAAGATTATGAT
GATTCACGTGGAGAATCTATTTCTACTTTTTTGAATAATAGTAGTAATAATAATTCACTT
GCCCATTTTGGTTCAATTCCATCTCATAATAATAGTAATAATCCTTCTTTTCTTTCTCAT
CACCATCAACAACACAACCCGAATAATACTTTCTTTGATACTGCTGCTAGTTTGTTCCCA
CAAAGTTCAAATCCTCCGTTCAACGCGAACGATCTCATTTGGTCATCATCATCAACAACA
TCGTCATCTCGGGCTTTAAGATCTGATCAGAGTTTGAATTTTATCTCATCAGCTCCATCA
TCAAATGTTACTGCTAGTGGTCAACTCTTTCATCATCCTAATCAAAACCCTTTTCCGGGT
TCAAGTTCGTTACAAGCAATGCAACAACCATCCATGGAACCAACGAATGTTGCACGGGCC
TCAAGCTCGGCCCAGCCCGATCAACAGCCCAATGTAGCGAAGAACCCGAAGAAACGCACA
AGAGCCTCACGGAGAGCGCCAACCACCGTGCTAACTACAGACACGACGAATTTTCGACAA
ATGGTTCAGGAATTCACCGGAATCCCTACGGCTCCGTTCACTGGTTCACCCTATACTCGC
CGTCTTGATCTGTTTTCGACAGCTGGATCGGGGATGAGGACGGGACATTTGGATTCACTT
GGACCATTATACCCTTTAAGGCCATCAGCACAAAAGGTTCAAGTATCTCCATTTATGTCA
CAATTATCATCTCCTCCTGCATCTTCGTTGAGTTCTAGCATGATTGATGCTTTAATGCCT
GGAAATAACAACTCTATGGTTGGTACTACCTCGGGCTCTACCTCTACTTCAACAAATTTC
CAGTTAGGTAATTCAAATCATGTTGGAATACAAAAACAAGCGCAAAACTTGTTCAACATG
CAGAATCAAATTCTTTCATTCAATACTGGATCAACCATTTTCAACACAAAGCCTTCAGGA
GGCGGAAGCAGTACTACGATGAATGTTCCTTCGTTAGATGAACTTGGAATAAGTCATGAG
CAACAAGTGAGTGCAAATCTGATCAGTGGATTTCAAGGAGGGAATAATAGTAATAATAAT
GTTAGTAGTCAAGGAAGAAATGATGGAAATAATCTTTCAAGATTGTGGAGAAATAGTAAT
AATAATCATGATGGGGGTCAAGAAAATCAACGGCTGAGATCATTCGATGGGAATAATAGT
AATGCTGGAAACTACAACAAGTTAAATTCAGGTAATTCTTCAACATCAGAATTTCATCCT
GAGATTAATAACGGTTTGGAAAATGTGTGTTCTACTGGTGAAGGACCAGTTTCTTCATGG
ACTTGTCCTGATTGA