Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g073940.3.1
CDS Infomation

TPR repeat-containing thioredoxin TTL1-like protein (AHRD V3.3 *** A0A0B2PI95_GLYSO)
Sequence

ATGGCAAAAATTGGAGAAAAATCAGTCGAAATTCAATTGGGTTGTGGTCTAGTGGCAGCG
ATATTTCAACGTGGAAATTGTAAGCCAATTAAACAACCAGTATCACAGATTTCCAAAAAG
AAATTATCTAAACCTCAACCAAAACAAACCTCAATTACTCTGAGGAATTCGATTTCACAA
GATCGAAAACACGTTAGGAGATCAATGTCTGATGATACACGAAGCTGCTCGAAGATCAAC
CAATCGTCGAATGCTTCGAGTAGGAAGAAAATGTCACAAGTTGTCAACTTGGTGCCTAAT
ACTCACAATCTTAGGAGGCAATCAACGAGTGACTTGAGCGCGAATGGAACGTTGAATCGC
GCTTCAAGCACGGGGAACATTATGTTGTTAGGCCAATCAGGGAACTTGAAGCAGCAGAAG
AGAATCCAACATGTTTCAACTGATAAAAAGTTTATTCTACAGAAAGGCAGAGTATTGATG
GGGAACATAGTAAACAAATTGGATCCTGATGTACTCAAATCCATGGGAAATGAACATTAC
AAAAATGGAAGATTTGAACAAGCTATTGCTTTATATAATCAAGCAATCGCGATTAATCCG
AAAAATGCTTGTTACTACAGCAACAAAAGTGCAGCTTTGTTGAGTTTGAACCGTTTGATT
GAAGCAGTAATCGAATGCAGAGAGGCCATTCAGCTAGATCCTTTTTACTACAACGCGCAA
TATCGCCTTGCAAGACTATATCTCAGATTAGGAGAAGCAGAGAAAGCATTGGAACATTAC
GAAAAATCAGGACCAAAAGTTGACAGAAGAGACATTTCTGAGGCTCAAAATCTTAAAAGA
ATGATACACAGTTGCATAGAAGCTCATAGCGTAAAAGATTACGTCACATTACTTCATATG
AGCGAAAATGCATTGTCATCTGGTGCAGATTCAGCTCCACAGGTTGAAACAGCATTGTCC
ATAATTTTATCGTCAAGTTTAATTTCAGCATTACGTATTTATCAATATTTACCCTTTATA
TTTGCAATGAGAGCTGAAGCATTGATGAAATTGCATAGACATGAGGAGGCATACACCATC
ATTCAGAAGGGACCTGATTTCAAAACATGTCTTTCTACTCGTATTATTGGATCAGCTAAA
ACAGCTTATTTCCTAATGATAAAAGCACAAGTTTACACATTAGTAGGCAGGTTTGATGAT
GGAATCAGTACAGCTCAAGAGGCAGCAAAACTCGATATAAGCAATGAGATAATCGCGATA
TTAAGAAGAATTAAAGGGGTGGCATCAGCTCGGGTAAAGGGTAACGAGCTTTTTAAGGAA
TCGAAATACATTGAGGCTTGTTGTATGTACACAGAAGGACTAGAACAGGATCCATACAAT
TCTGTTCTGTTATTTAACAGAGCAACTTGTCGAATCAAGCTAGGACAATTCGAAAAAGGA
TTGGAGGATTGCAATGCAGCTCTTGTGTTACGTCCTTCGTATACGAAGGCTAGAGTTCGT
AGAGCTGATTGTTACGTAAAGTTGGAAAGATGGGAGGCTGCAATTCAAGAATTTGAAATG
ATGTTACAAGAAAAACAAGGGGATGAGGAAGTTATTAAGAGAGCATTGATTGATGCAAAA
ATTCAATTAAAGAGGGAGAGGGAAGAGGATCAAAAACAAAGAGAGCTAAGCAATGACTCT
AACTTAGTGTTAGTTATTAGCAATTAA

Peptide Sequence

PEP ID

Solyc04g073940.3.1
PEP Infomation

TPR repeat-containing thioredoxin TTL1-like protein (AHRD V3.3 *** A0A0B2PI95_GLYSO)
Sequence

MAKIGEKSVEIQLGCGLVAAIFQRGNCKPIKQPVSQISKKKLSKPQPKQTSITLRNSISQ
DRKHVRRSMSDDTRSCSKINQSSNASSRKKMSQVVNLVPNTHNLRRQSTSDLSANGTLNR
ASSTGNIMLLGQSGNLKQQKRIQHVSTDKKFILQKGRVLMGNIVNKLDPDVLKSMGNEHY
KNGRFEQAIALYNQAIAINPKNACYYSNKSAALLSLNRLIEAVIECREAIQLDPFYYNAQ
YRLARLYLRLGEAEKALEHYEKSGPKVDRRDISEAQNLKRMIHSCIEAHSVKDYVTLLHM
SENALSSGADSAPQVETALSIILSSSLISALRIYQYLPFIFAMRAEALMKLHRHEEAYTI
IQKGPDFKTCLSTRIIGSAKTAYFLMIKAQVYTLVGRFDDGISTAQEAAKLDISNEIIAI
LRRIKGVASARVKGNELFKESKYIEACCMYTEGLEQDPYNSVLLFNRATCRIKLGQFEKG
LEDCNAALVLRPSYTKARVRRADCYVKLERWEAAIQEFEMMLQEKQGDEEVIKRALIDAK
IQLKREREEDQKQRELSNDSNLVLVISN*

Transcript Sequence

Transcript ID

Solyc04g073940.3.1
Transcript Infomation

TPR repeat-containing thioredoxin TTL1-like protein (AHRD V3.3 *** A0A0B2PI95_GLYSO)
Sequence

GTTAGACTATAACTACCAAACTCGTTAAAGTTCAAACGAATTAGGCAAATTATATATACT
TTAGGCACCCCGAGTAGCGTGTAAGCATTAGTTTCAGTAAGATGATAGTTTTCACTAAGG
TTTGGTGAATGAAACAATACATGTTTGCACGTGTGATATTCAACTTTGATATGATTGATT
CCAGGGTCCTACTAGTTTGGCACCAACAGGTGACATAAATCTTAAACAAAATTGTTCCAA
ATAACACTTTCTTGATAAGACATTCAATCATACTTTATTAGAAAATTAGAAATGATATAT
CCTACCCAATAGTCTTGTCCCCTTTTGGAATTTTGTTTTTGATAAGCCTAACCCCTTTAG
TTTCAAAAATGAAAAATAAAGTTGGTTTCTTAGCTTCCACTCTTAGACCTTTGAGTAATA
TATGTATATAACTATTACATCATTTCTTCTAATCTAAATAAGGTCCTATCACATTGAACA
CTTGATATACAAGTTTTTATTTGACTTCTCCCTCCACTTTTGATAAAGTCATCTTCCATT
TGTAAAATTTGATTGAAGAAGAAATTATGGCAAAAATTGGAGAAAAATCAGTCGAAATTC
AATTGGGTTGTGGTCTAGTGGCAGCGATATTTCAACGTGGAAATTGTAAGCCAATTAAAC
AACCAGTATCACAGATTTCCAAAAAGAAATTATCTAAACCTCAACCAAAACAAACCTCAA
TTACTCTGAGGAATTCGATTTCACAAGATCGAAAACACGTTAGGAGATCAATGTCTGATG
ATACACGAAGCTGCTCGAAGATCAACCAATCGTCGAATGCTTCGAGTAGGAAGAAAATGT
CACAAGTTGTCAACTTGGTGCCTAATACTCACAATCTTAGGAGGCAATCAACGAGTGACT
TGAGCGCGAATGGAACGTTGAATCGCGCTTCAAGCACGGGGAACATTATGTTGTTAGGCC
AATCAGGGAACTTGAAGCAGCAGAAGAGAATCCAACATGTTTCAACTGATAAAAAGTTTA
TTCTACAGAAAGGCAGAGTATTGATGGGGAACATAGTAAACAAATTGGATCCTGATGTAC
TCAAATCCATGGGAAATGAACATTACAAAAATGGAAGATTTGAACAAGCTATTGCTTTAT
ATAATCAAGCAATCGCGATTAATCCGAAAAATGCTTGTTACTACAGCAACAAAAGTGCAG
CTTTGTTGAGTTTGAACCGTTTGATTGAAGCAGTAATCGAATGCAGAGAGGCCATTCAGC
TAGATCCTTTTTACTACAACGCGCAATATCGCCTTGCAAGACTATATCTCAGATTAGGAG
AAGCAGAGAAAGCATTGGAACATTACGAAAAATCAGGACCAAAAGTTGACAGAAGAGACA
TTTCTGAGGCTCAAAATCTTAAAAGAATGATACACAGTTGCATAGAAGCTCATAGCGTAA
AAGATTACGTCACATTACTTCATATGAGCGAAAATGCATTGTCATCTGGTGCAGATTCAG
CTCCACAGGTTGAAACAGCATTGTCCATAATTTTATCGTCAAGTTTAATTTCAGCATTAC
GTATTTATCAATATTTACCCTTTATATTTGCAATGAGAGCTGAAGCATTGATGAAATTGC
ATAGACATGAGGAGGCATACACCATCATTCAGAAGGGACCTGATTTCAAAACATGTCTTT
CTACTCGTATTATTGGATCAGCTAAAACAGCTTATTTCCTAATGATAAAAGCACAAGTTT
ACACATTAGTAGGCAGGTTTGATGATGGAATCAGTACAGCTCAAGAGGCAGCAAAACTCG
ATATAAGCAATGAGATAATCGCGATATTAAGAAGAATTAAAGGGGTGGCATCAGCTCGGG
TAAAGGGTAACGAGCTTTTTAAGGAATCGAAATACATTGAGGCTTGTTGTATGTACACAG
AAGGACTAGAACAGGATCCATACAATTCTGTTCTGTTATTTAACAGAGCAACTTGTCGAA
TCAAGCTAGGACAATTCGAAAAAGGATTGGAGGATTGCAATGCAGCTCTTGTGTTACGTC
CTTCGTATACGAAGGCTAGAGTTCGTAGAGCTGATTGTTACGTAAAGTTGGAAAGATGGG
AGGCTGCAATTCAAGAATTTGAAATGATGTTACAAGAAAAACAAGGGGATGAGGAAGTTA
TTAAGAGAGCATTGATTGATGCAAAAATTCAATTAAAGAGGGAGAGGGAAGAGGATCAAA
AACAAAGAGAGCTAAGCAATGACTCTAACTTAGTGTTAGTTATTAGCAATTAATTTTGTT
TTAATATTTTGCTTGTTTATGAAGAAGCTTGATTTGATTATATCATGTTTGTGCAATGTA
TATAGCTTCAAGTCAGTATACCGGTAAATTATATATTCAAGTCATCATTGTTAAGAAATC
ATATAGTAATTTGTTGGAGTCTCATCTTGTTTGTGGGATGAGAATTTGGTT