Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g072920.3.1
CDS Infomation

Trehalose 6-phosphate phosphatase (AHRD V3.3 *** K4BTS9_SOLLC)
Sequence

ATGACTAATCAGAATGTGATAATTTCTGACCCGAGATCAGGATTCGACTCTTCACTCTTA
TCATTGTCCCCTGCCGTTCCCGGTCCACTACCGCAGCCGGGAAGATTCATCGCTGTTCCA
GCGAAGAGATCATTCAAAAATATTGATTCTACTGATGCAGCTAGAATCACTGCTTTACTT
GATTCCATGAGAGCTTCTTCTCCAACTCGAAGATCCTCAGAAACTGAAAATCTCAACTCC
TGGATTGTTCATCATCCATCAGCTCTGAATATGTTCGATGAAATTATAAATTCTTCGAAA
GGAAAACAAATTGTAGTGTTTTTGGATTATGATGGTACATTGTCTCCTATTGTTGATGAT
CCTGATAAAGCCTTCATGACTTGTGAGATGAGGGAAGCAGTAAGAAACACATCAAAGTAT
TTTCCAACAGCAATAGTGAGTGGAAGATGCAGAGCAAAAGTGTTTAATTTTGTGAAATTG
TCAGAATTATATTATGCTGGAAGTCATGGAATGGACATTAAGGCGCCTGTTAAAGGGCGT
AATTATAGAAAAGGAAATAATCAAACTGTACTCTGCCAACCTGCAAGAGAATTTTTACCC
ATGATAAGTGAGGTATATAAATCTTTAGTGGAGAAAACAAAATCTATACCAGGAGCTAAA
GTGGAAAACAACAAATTTTGTTTATCCGTACATTTCCGTCGTGTTGAAGAAAAGAGATGG
ACTGAACTAGCTGAGCAAGTGAAATCAGTGACTAAGGAATACCCAACGCTTCGATTAACT
CAAGGAAGAAAGGTTCTGGAGATTCGTCCTAGTATTAAATGGGACAAGGGAAATGCACTC
GAATTTTTGTTGGAATCATTAGGCTATGCAAACTCAAATGATGTTTTGCCTATTTATATT
GGCGATGATCGAACTGATGAAGATGCTTTCAAGGTTTTGCGTGATAGAGGACAAGGCTTT
GGAATATTAGTGTCCAAATCACCTAAAGAAACTAATGCTACTTATTCTTTGCAAGAACCA
TTAGAGGTTATGTACTTTTTGAATCGTTTGGTGGAGTGGAAACAATCGTCGTTACAACAA
AAATATCAGAAGAAATAA

Peptide Sequence

PEP ID

Solyc04g072920.3.1
PEP Infomation

Trehalose 6-phosphate phosphatase (AHRD V3.3 *** K4BTS9_SOLLC)
Sequence

MTNQNVIISDPRSGFDSSLLSLSPAVPGPLPQPGRFIAVPAKRSFKNIDSTDAARITALL
DSMRASSPTRRSSETENLNSWIVHHPSALNMFDEIINSSKGKQIVVFLDYDGTLSPIVDD
PDKAFMTCEMREAVRNTSKYFPTAIVSGRCRAKVFNFVKLSELYYAGSHGMDIKAPVKGR
NYRKGNNQTVLCQPAREFLPMISEVYKSLVEKTKSIPGAKVENNKFCLSVHFRRVEEKRW
TELAEQVKSVTKEYPTLRLTQGRKVLEIRPSIKWDKGNALEFLLESLGYANSNDVLPIYI
GDDRTDEDAFKVLRDRGQGFGILVSKSPKETNATYSLQEPLEVMYFLNRLVEWKQSSLQQ
KYQKK*

Transcript Sequence

Transcript ID

Solyc04g072920.3.1
Transcript Infomation

Trehalose 6-phosphate phosphatase (AHRD V3.3 *** K4BTS9_SOLLC)
Sequence

GTCTCACTTCTCTCTCACTCTCTTCATTTTCTCTCAATTTCCCTTCCTTTTTCCCACTCA
ATCAAATTCTTCGAATTTGCTCTGTTTTTCAACAATCAGTTGTATAGCAAAAATGACTAA
TCAGAATGTGATAATTTCTGACCCGAGATCAGGATTCGACTCTTCACTCTTATCATTGTC
CCCTGCCGTTCCCGGTCCACTACCGCAGCCGGGAAGATTCATCGCTGTTCCAGCGAAGAG
ATCATTCAAAAATATTGATTCTACTGATGCAGCTAGAATCACTGCTTTACTTGATTCCAT
GAGAGCTTCTTCTCCAACTCGAAGATCCTCAGAAACTGAAAATCTCAACTCCTGGATTGT
TCATCATCCATCAGCTCTGAATATGTTCGATGAAATTATAAATTCTTCGAAAGGAAAACA
AATTGTAGTGTTTTTGGATTATGATGGTACATTGTCTCCTATTGTTGATGATCCTGATAA
AGCCTTCATGACTTGTGAGATGAGGGAAGCAGTAAGAAACACATCAAAGTATTTTCCAAC
AGCAATAGTGAGTGGAAGATGCAGAGCAAAAGTGTTTAATTTTGTGAAATTGTCAGAATT
ATATTATGCTGGAAGTCATGGAATGGACATTAAGGCGCCTGTTAAAGGGCGTAATTATAG
AAAAGGAAATAATCAAACTGTACTCTGCCAACCTGCAAGAGAATTTTTACCCATGATAAG
TGAGGTATATAAATCTTTAGTGGAGAAAACAAAATCTATACCAGGAGCTAAAGTGGAAAA
CAACAAATTTTGTTTATCCGTACATTTCCGTCGTGTTGAAGAAAAGAGATGGACTGAACT
AGCTGAGCAAGTGAAATCAGTGACTAAGGAATACCCAACGCTTCGATTAACTCAAGGAAG
AAAGGTTCTGGAGATTCGTCCTAGTATTAAATGGGACAAGGGAAATGCACTCGAATTTTT
GTTGGAATCATTAGGCTATGCAAACTCAAATGATGTTTTGCCTATTTATATTGGCGATGA
TCGAACTGATGAAGATGCTTTCAAGGTTTTGCGTGATAGAGGACAAGGCTTTGGAATATT
AGTGTCCAAATCACCTAAAGAAACTAATGCTACTTATTCTTTGCAAGAACCATTAGAGGT
TATGTACTTTTTGAATCGTTTGGTGGAGTGGAAACAATCGTCGTTACAACAAAAATATCA
GAAGAAATAAAAGTACTAAATCTCAGAAGACTTTAGCTAAATTAACACAAGGAATTGACC
CTTTTAACCCTGGAAGTTTTATTAGGGATGGGGTTTAATTAAAAGAACTTAATTTGTATC
TTTTTCTTCTTGGAAGACTCAACTGTAATTGGAAAAAGAAAATGGAAAAATTTTGTAATT
TTCTGAGTATAAAAATGTTCAATAAGAAAGTATTATTGTGCACTTCTCTCTCTCTCTCTC
TAATTTATTTTTGTATAATATAATGTATGTATATCTGGGTTAACACGTGTTGGCGTGGAA
TTCAATTTGTGCATGTGAATTTGGAAAAGCGCATGCATTTGTATATGGACTTATCAAATG
TATTTATGGTGCAAAAATAGGACAACAACAACACCCTTTCACGTGGAGACTTTGCCTTTC
TTTGTGCAAATGTTTCTTGTTGTAGTTGGAACGTTTTAAGTCGGGGCAGAGCTATTATGA
AAAAGTTAATAATTTCGAAATAAAAAATTAGCATAGAGCATGCAAGTTCACGGTGGTAGA
GTCATGAGGTTAGTCACGATTTCTATAAAACTCATTAGCTTCTTATTCAAATTTATGATT
AAAAAATTTAGTTCAAATTTAATGCGAGTTCTATTGAGTTGAGTAACTTCTAATCTTCTT
AAAAACTTTATTAAAAATACAAATAGAAATCTTGAATTAAAATTCTGAAATCAGAAACTT
AAATATATACAAATTTTGGCGTAAATTACTCACTTTTAAAACCTAGTAAATTAAAAGATT
TAAAATCATGTAACTATAAAATTTAAATTTTGACTTCGTCTAATTTTTTTGGTTTAAACT
GTAGAGTTAGTATATATTTGTGAAAAAGCTTATTGAATATGTATATGTATAATACACACT
GACATTCCCAACTTTTCAATCTAAATACACATATCTTACATTATGGATCTGTCTCGTAAA
TGAAACACTACACTAATACCAACATTTTTCTGGGTAAAGTTCACTGAAATTATGATGGGC
ATATATATTTTGATATACCTAGTTCCATATATATTAATTAGTTCAATTAAATATATTAGA
AATCATACGAGAATTATCTAGCAAATATAAGGTAGCATCAATTGTAAATGTTAATAATGC
TAGTTCTTTCTTATATTAAAATTTACTAAATAAAATACAAATATTAGATTTCACGTACGT
CAATAATTCAAAATTTAACTTCTTAGTCTAATAAAGTATTAAGTACATCAATATGTCACT
TCCTCCATCCAGGAGGGCAATGTAAATGAATTGCATGTTAACTGTATGGAAATTCTTCTA
TTGACCATATAAAGAAGTAAAGAACCCTTTGTTGCATTAATAGAAT