Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g072880.3.1
CDS Infomation

CycH1_2
Sequence

ATGGCTGATTTTGTGACATCTACTCATAGAACCAAGTGGATTTTTACTCCCCAAGATATT
AAACATAAGTATAAAGTTGCTAATCACAGAGCGAAACAAGCACTGGAGAAGTATGGAACA
ACGCGAATGGAAGTTGATATTGATGGGTCGTTCTCATATGCTGAAAGCCAAAATGACGCC
AAAGATAATGCTGAAAAGCGTCCTAAACCACTCAAGGTTGAAGAAGAACAACTTCTAAAG
GCTTTCTACGAGTTCAAAATTCAAGACGTCTGTGATGCCTTTAAGTTCCCACGTAAGATT
CAGGCGACAGCTCTCATTTATTTTAAGAGGTTTTATCTACAATGGTCCGTGATGGAACAT
CACCCCAAAGACATTATGTTAACCTGCATATATGCAGCTTGCAAGGCAGAGGAAAACCAT
GTATCAGCTGAGGAGCTTGGGAAGGGTATTGGACAGGATCATCATGTAATCCTCAACAAT
GAGATGCTGGTTTTCCAGAGTCTAGGATTTGATCTAATTGTTTACTCTCCATATCGTGCT
CTTGAAGGTTTTATCAGTGATTTAGAGGAATTCTGTGGAGCTAAAGATGAAGACCAGCTT
GTGGCTCTGAAGGGTTCACTTGATACTGCTAGGATTGAAGCAGATAAGATTATGCGTTCT
GATGGACCACTTCTTTTCCCACCTGGGCAGTTGGCATTGACAGCTTTACATAGAGCTAAC
GCAGTGCATAGCATATTTGATTTTGAGAGGTACCTAAGAAGTGTCCTATCACGTTATCAG
CCAGCTCATGCCATTTCAGAACTTACTGGTTCTATAGATGCCATTGATTCTTTGATTGGT
AAACTTTTGACTCCGACCTCCAAAGATGTGAAGCACGTGGATCGGAAACTCAAATCATGT
CTTGATCCGGGTTCACATGACAAGAGTAAAAAAAGGAAGCATAGATCCAAAGATAGCTCA
CATGAGGCTACTGACTTATCTTGA

Peptide Sequence

PEP ID

Solyc04g072880.3.1
PEP Infomation

CycH1_2
Sequence

MADFVTSTHRTKWIFTPQDIKHKYKVANHRAKQALEKYGTTRMEVDIDGSFSYAESQNDA
KDNAEKRPKPLKVEEEQLLKAFYEFKIQDVCDAFKFPRKIQATALIYFKRFYLQWSVMEH
HPKDIMLTCIYAACKAEENHVSAEELGKGIGQDHHVILNNEMLVFQSLGFDLIVYSPYRA
LEGFISDLEEFCGAKDEDQLVALKGSLDTARIEADKIMRSDGPLLFPPGQLALTALHRAN
AVHSIFDFERYLRSVLSRYQPAHAISELTGSIDAIDSLIGKLLTPTSKDVKHVDRKLKSC
LDPGSHDKSKKRKHRSKDSSHEATDLS*

Transcript Sequence

Transcript ID

Solyc04g072880.3.1
Transcript Infomation

CycH1_2
Sequence

TGAAAGGTTCAGAATTCACCCAGAAGTTTCAAGTCCAAATCTTAGATGTTATCTTTTTTT
TTTCAAACTCCCTTAATAAAATTCTGAATCCTTATTAGCCACCCATGTCACATGACGATA
ACATAGAAGGAACTCATATTCAAAAGTGGGTTAAATATAAATCAACTAATATTATTTATA
ATAAATATGATAACTCAAAAATATACCTCGATTGTACTCTTTTAAAATATATATAAGACG
CGAGAAACTCTAGAAAGTACTCTATCAAAAATATGTTTGATAGAAGAACTGTGTAACTTT
ACATTAGTCCAATAGAGGGTAGTATAATATTACAATAATATGTTTTTAACAATTTTATTT
TATTTTGTGAGTCAACTCAAATTCCATTCAATTTATGAGATATTATTAGAATCTCAAAAT
TCAAATAACTTTTTTGCAAGGTTCAAATAATCTAAATTATAAAAAATAATTCGAAAAATT
TCACCTAAATCAAATGACGGAGAGGGAGTAACGTGATTGCGCGAGATGTTTTATACTTGC
ATAGCTTACCGGGCATGAATAAATCAGAGCACTTCACTGTGCTTATTAAATTCTTCCATT
ACAAAGCCTTAAGCCCTTCCGGTATATTAACCCTCTGCTGGTCTCTCCGGCGATCGTTTC
ACCGGCGAAAAATCTGCGGGGCATGGCATAGTTTAAAAGGAATCGCATCCAAACGAAAAT
TAGAATTGGCAGAGAGAAGACATGGCTGATTTTGTGACATCTACTCATAGAACCAAGTGG
ATTTTTACTCCCCAAGATATTAAACATAAGTATAAAGTTGCTAATCACAGAGCGAAACAA
GCACTGGAGAAGTATGGAACAACGCGAATGGAAGTTGATATTGATGGGTCGTTCTCATAT
GCTGAAAGCCAAAATGACGCCAAAGATAATGCTGAAAAGCGTCCTAAACCACTCAAGGTT
GAAGAAGAACAACTTCTAAAGGCTTTCTACGAGTTCAAAATTCAAGACGTCTGTGATGCC
TTTAAGTTCCCACGTAAGATTCAGGCGACAGCTCTCATTTATTTTAAGAGGTTTTATCTA
CAATGGTCCGTGATGGAACATCACCCCAAAGACATTATGTTAACCTGCATATATGCAGCT
TGCAAGGCAGAGGAAAACCATGTATCAGCTGAGGAGCTTGGGAAGGGTATTGGACAGGAT
CATCATGTAATCCTCAACAATGAGATGCTGGTTTTCCAGAGTCTAGGATTTGATCTAATT
GTTTACTCTCCATATCGTGCTCTTGAAGGTTTTATCAGTGATTTAGAGGAATTCTGTGGA
GCTAAAGATGAAGACCAGCTTGTGGCTCTGAAGGGTTCACTTGATACTGCTAGGATTGAA
GCAGATAAGATTATGCGTTCTGATGGACCACTTCTTTTCCCACCTGGGCAGTTGGCATTG
ACAGCTTTACATAGAGCTAACGCAGTGCATAGCATATTTGATTTTGAGAGGTACCTAAGA
AGTGTCCTATCACGTTATCAGCCAGCTCATGCCATTTCAGAACTTACTGGTTCTATAGAT
GCCATTGATTCTTTGATTGGTAAACTTTTGACTCCGACCTCCAAAGATGTGAAGCACGTG
GATCGGAAACTCAAATCATGTCTTGATCCGGGTTCACATGACAAGAGTAAAAAAAGGAAG
CATAGATCCAAAGATAGCTCACATGAGGCTACTGACTTATCTTGAACTGCTCTAACTCAA
GTTTGTAGCTTCAAAGCATATCTTCTTTGCCCAGTGGAAATAGCGTTTCTCATTGCTGCT
CATCAGTTCCCTAATATAGAACAAAAATTGAAGCCAGACTGTAGAAGTAGAGGCGGGTCG
AGGATTTAAGATCACAAATTTCTCAAGACTTTTTTCTTAAATTTTGTACTATGAAATCAA
TTAGTAGTTTAAACTTCGAGTGTTAGTTAACCTGGAATTTACTGTTTGGAGATGTAAAAG
CTCACTTTTTAGAAATGAGAATGTTGTTCTTAATGAGAACTTCAAAGTTTAATATGCAGT
TCCTGCTTTT