Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g072870.2.1
CDS Infomation

Beta-D-xylosidase (AHRD V3.3 *** H1AC33_SOLLC)
Sequence

ATGGGACTCCATAAAATTATTGCGATTACCATAATTATTTCCTTTCTCAGTAATACTGAA
TCAACTTGTCTTCCATTTTCATGTGATACATCCAATCCAGATACCATAAAATTTCAATTC
TGTAATTCTTCATTGCCCGTCGATCAAAGAGTAGATGATCTCATTTTACGCCTGAATTTG
GATGAGAAAATATCACAATTGGGTAACAGTGCACCAGCCATTCCGCGGCTTAATATCCCT
GCTTACGAGTGGTGGTCGGAGGCGTTACATGGCCTATCGATGGAAGGATTAGGGGTGAAA
TTTAATGGAAGTATTAAAGCTGCAACTCAGTTCCCTCAGATCATTCTTACTGCTTCTACT
TTTGATGAACATCTCTGGTATCGCATTGCTCAGGCAATTTCAAGAGAGGCAAGAGCAGTG
TACAATGCAGGTGAACTAAAGGGAATGACATTTTGGGCACCAAATGTGAACATATTAAGG
GATCCAAGATGGGGAAGAGCACAAGAAACAGCTGGGGAAGATCCGATGATGGTAGGAAAA
TACGCAGTGGCTTATGTAAGAGGACTTCAGGGGGATAGTTTTGAAGGTGGGAAGCTCAAA
GATGGGCATCTTCAAGCTTCAGCTTGCTGCAAGCACTTTGCTGCTCAAGATTTGGATTAC
TGGAATGGCCACCATCGTTTCACCTTCGATGCTCAAGTTACACCACAGGATATGGCAGAT
TCATTTCAACCACCATTCAAGACTTGTGTGGAAGAAGGAAAAGCTACCAGTCTAATGTGT
GCTTATAGTCGTCTCAATGGGGTCTCAAACTGCGCTAACCATGATCTCCTGACCACAACT
GCTCGCGGACAGTGGGGTTTCAACGGTTACATTGTATCAGATTGTGATGCAATTCGCGTT
ATGCGTGATTCCCATGGATACACAGCTGAAGATGCAGTTGCAGCTTCTCTCAAAGCTGGT
ATGGATGTAAACTGCGGTTCATTCGTGGCAAACTACACAAGATTAGCATTGGAGAAGCAG
AAATTACAAGATTCTGATATAGACAGAGCTCTTCGCAATATTTTCTCCATTAGAATGAGG
TTAGGACTATTCAATGGTGATCCAAAACAGCTGGAATACGGAGACATTTCTCCTGCAGAG
ATTTGTAGTCAAGAGCATCAAGATCTGTCCCTTGAAGCAGCAAAAAATGGCATTGTCCTT
CTGAAGAATTCTGCCAAACTCCTTCCACTTTCTAAGATAAAAATAACATCCCTTGCTATA
ATAGGTCCAAAAGCAAACGATTCCGAATTACTTTTAGGTAACTATGCAGGCATTCCCTGC
AAAAAAAATTCGTTACTCCAAGGATTTCAAGGCCTTGTGAAAAACATAGGCTACCATCCA
GGCTGCAATTTTGTCAATTGTACTTCTGCTGCAATAGATGAAGCAGTAGATGTTGCTAAA
AAGGCTCAGTATGTTGTTTTAATAATGGGATTAGACCAGCAAGTGGAGAGGGAGAACTGG
GATCGCGTAGATTTAGGACTACCTGGACAACAAGAGATTCTTATTAACGCAGTAGCCGAG
GCTGCTGTAGAACCTGTTATACTAGTGTTAGTTAGTGGAGGTCCTATTGATATTTCTTTT
GCCAAGAACCACCCGAAAATCGGAGGCATCTTGTGGATTGGTTATCCTGGAGAAGGTGGA
GCAGCTGCACTAACACAGATTCTTTTTGGTGAACATAATCCAGGGGGCAGGTTACCAGTA
ACATGGTATCCTAAGGACTTCATAAAAGTACCAATGACAGACATGAACATGAGGCCTAAT
TCATCGACTGGATATCCAGGTCGAACTTACAAATTCTACAAAGGGCCAAAAGTCTATGGA
TTTGGCTATGGTCTTAGCTACACAAATTATACATACGACATCGCGTCTGTCACTCATGAC
AAACTCTATTTCATTAACCAAACATCATCAGACAAGAGAAGAAAACACGGTTCACATATT
CATAATATTGCAGTTTCGAAATTTGGCTCAGAGGTTTGCAACAACGCGAAGATATCAGTT
AAGGTTGTGGTGAGAAACAAGGGGAAAATAGGTGGTATACATCCTGTGTTGTTGTTTGTT
AGGCATTCTAAAGTGAAGAATGATGAAGTTCCAAGAAAGCAGTTGATTGGATTCAAAAGT
GTGCATTTAGGTGCAAGAGAAAAAAGTAAGATTAAGTTTATTGTGAGCCCTTGTCAACAC
TTTAGCAGGGCTAATAAGCACGGTATATCAGTAATTGATGAAGGCAAATATTATCTTGTT
GTGGGAGATAAGAAATATCCTGTTACTGTTTCTATATGA

Peptide Sequence

PEP ID

Solyc04g072870.2.1
PEP Infomation

Beta-D-xylosidase (AHRD V3.3 *** H1AC33_SOLLC)
Sequence

MGLHKIIAITIIISFLSNTESTCLPFSCDTSNPDTIKFQFCNSSLPVDQRVDDLILRLNL
DEKISQLGNSAPAIPRLNIPAYEWWSEALHGLSMEGLGVKFNGSIKAATQFPQIILTAST
FDEHLWYRIAQAISREARAVYNAGELKGMTFWAPNVNILRDPRWGRAQETAGEDPMMVGK
YAVAYVRGLQGDSFEGGKLKDGHLQASACCKHFAAQDLDYWNGHHRFTFDAQVTPQDMAD
SFQPPFKTCVEEGKATSLMCAYSRLNGVSNCANHDLLTTTARGQWGFNGYIVSDCDAIRV
MRDSHGYTAEDAVAASLKAGMDVNCGSFVANYTRLALEKQKLQDSDIDRALRNIFSIRMR
LGLFNGDPKQLEYGDISPAEICSQEHQDLSLEAAKNGIVLLKNSAKLLPLSKIKITSLAI
IGPKANDSELLLGNYAGIPCKKNSLLQGFQGLVKNIGYHPGCNFVNCTSAAIDEAVDVAK
KAQYVVLIMGLDQQVERENWDRVDLGLPGQQEILINAVAEAAVEPVILVLVSGGPIDISF
AKNHPKIGGILWIGYPGEGGAAALTQILFGEHNPGGRLPVTWYPKDFIKVPMTDMNMRPN
SSTGYPGRTYKFYKGPKVYGFGYGLSYTNYTYDIASVTHDKLYFINQTSSDKRRKHGSHI
HNIAVSKFGSEVCNNAKISVKVVVRNKGKIGGIHPVLLFVRHSKVKNDEVPRKQLIGFKS
VHLGAREKSKIKFIVSPCQHFSRANKHGISVIDEGKYYLVVGDKKYPVTVSI*

Transcript Sequence

Transcript ID

Solyc04g072870.2.1
Transcript Infomation

Beta-D-xylosidase (AHRD V3.3 *** H1AC33_SOLLC)
Sequence

ATGGGACTCCATAAAATTATTGCGATTACCATAATTATTTCCTTTCTCAGTAATACTGAA
TCAACTTGTCTTCCATTTTCATGTGATACATCCAATCCAGATACCATAAAATTTCAATTC
TGTAATTCTTCATTGCCCGTCGATCAAAGAGTAGATGATCTCATTTTACGCCTGAATTTG
GATGAGAAAATATCACAATTGGGTAACAGTGCACCAGCCATTCCGCGGCTTAATATCCCT
GCTTACGAGTGGTGGTCGGAGGCGTTACATGGCCTATCGATGGAAGGATTAGGGGTGAAA
TTTAATGGAAGTATTAAAGCTGCAACTCAGTTCCCTCAGATCATTCTTACTGCTTCTACT
TTTGATGAACATCTCTGGTATCGCATTGCTCAGGCAATTTCAAGAGAGGCAAGAGCAGTG
TACAATGCAGGTGAACTAAAGGGAATGACATTTTGGGCACCAAATGTGAACATATTAAGG
GATCCAAGATGGGGAAGAGCACAAGAAACAGCTGGGGAAGATCCGATGATGGTAGGAAAA
TACGCAGTGGCTTATGTAAGAGGACTTCAGGGGGATAGTTTTGAAGGTGGGAAGCTCAAA
GATGGGCATCTTCAAGCTTCAGCTTGCTGCAAGCACTTTGCTGCTCAAGATTTGGATTAC
TGGAATGGCCACCATCGTTTCACCTTCGATGCTCAAGTTACACCACAGGATATGGCAGAT
TCATTTCAACCACCATTCAAGACTTGTGTGGAAGAAGGAAAAGCTACCAGTCTAATGTGT
GCTTATAGTCGTCTCAATGGGGTCTCAAACTGCGCTAACCATGATCTCCTGACCACAACT
GCTCGCGGACAGTGGGGTTTCAACGGTTACATTGTATCAGATTGTGATGCAATTCGCGTT
ATGCGTGATTCCCATGGATACACAGCTGAAGATGCAGTTGCAGCTTCTCTCAAAGCTGGT
ATGGATGTAAACTGCGGTTCATTCGTGGCAAACTACACAAGATTAGCATTGGAGAAGCAG
AAATTACAAGATTCTGATATAGACAGAGCTCTTCGCAATATTTTCTCCATTAGAATGAGG
TTAGGACTATTCAATGGTGATCCAAAACAGCTGGAATACGGAGACATTTCTCCTGCAGAG
ATTTGTAGTCAAGAGCATCAAGATCTGTCCCTTGAAGCAGCAAAAAATGGCATTGTCCTT
CTGAAGAATTCTGCCAAACTCCTTCCACTTTCTAAGATAAAAATAACATCCCTTGCTATA
ATAGGTCCAAAAGCAAACGATTCCGAATTACTTTTAGGTAACTATGCAGGCATTCCCTGC
AAAAAAAATTCGTTACTCCAAGGATTTCAAGGCCTTGTGAAAAACATAGGCTACCATCCA
GGCTGCAATTTTGTCAATTGTACTTCTGCTGCAATAGATGAAGCAGTAGATGTTGCTAAA
AAGGCTCAGTATGTTGTTTTAATAATGGGATTAGACCAGCAAGTGGAGAGGGAGAACTGG
GATCGCGTAGATTTAGGACTACCTGGACAACAAGAGATTCTTATTAACGCAGTAGCCGAG
GCTGCTGTAGAACCTGTTATACTAGTGTTAGTTAGTGGAGGTCCTATTGATATTTCTTTT
GCCAAGAACCACCCGAAAATCGGAGGCATCTTGTGGATTGGTTATCCTGGAGAAGGTGGA
GCAGCTGCACTAACACAGATTCTTTTTGGTGAACATAATCCAGGGGGCAGGTTACCAGTA
ACATGGTATCCTAAGGACTTCATAAAAGTACCAATGACAGACATGAACATGAGGCCTAAT
TCATCGACTGGATATCCAGGTCGAACTTACAAATTCTACAAAGGGCCAAAAGTCTATGGA
TTTGGCTATGGTCTTAGCTACACAAATTATACATACGACATCGCGTCTGTCACTCATGAC
AAACTCTATTTCATTAACCAAACATCATCAGACAAGAGAAGAAAACACGGTTCACATATT
CATAATATTGCAGTTTCGAAATTTGGCTCAGAGGTTTGCAACAACGCGAAGATATCAGTT
AAGGTTGTGGTGAGAAACAAGGGGAAAATAGGTGGTATACATCCTGTGTTGTTGTTTGTT
AGGCATTCTAAAGTGAAGAATGATGAAGTTCCAAGAAAGCAGTTGATTGGATTCAAAAGT
GTGCATTTAGGTGCAAGAGAAAAAAGTAAGATTAAGTTTATTGTGAGCCCTTGTCAACAC
TTTAGCAGGGCTAATAAGCACGGTATATCAGTAATTGATGAAGGCAAATATTATCTTGTT
GTGGGAGATAAGAAATATCCTGTTACTGTTTCTATATGAAACCTTTAAATCACATATAAA
AATATAGTCCTTAATGATTAGATCACACTTGTGGTGTGCATTATAATCCTGTAAAGAGGA
TTCATCACCTTATTGAGCAGAATAAATATGTTAATTTCTTGATTTTTATAGTTG