Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g072400.3.1
CDS Infomation

Plant/F7F23-4 protein (AHRD V3.3 *** G7IJR9_MEDTR)
Sequence

ATGGTGCTAGCAGCTTCTTTAACAACATGCTATGCCGTTTCTGTACGGCCGTCCACTTCT
GCTTCTAGAAACTTCTCTCTTCTTCCGCCGCTATCTCTTATCCGAAGTCCAATTCAACAG
CGCCAGCCGCACCTCGCCGGAGCTAATTCCGGAGGTTCTCTCTTATCTATAAACGGAGTG
AGGTTGCGACAGTCATCTTTTGCTGCTGTAATTGGTGATACAACTGCTGTGTCAGATGGA
GCAATTAACGAGGAAGTGTCCACTACTAAATTATCTGATTCTGCTACTACTCAGGAAACT
GACGCGGAAAATGGAGAGGACAGGAAAGATGCTTCTGAAGGGTTGGATGAGAATAAAATG
ATCCGAGTATGCGACAAGTTAATTGAGGTCTTCTTGGTTGACAAACCCAAACCTACTGAA
TGGAGAAGATTGCTAGCATTTAGTAAGGAATGGAACAATATTCGGCCCCATTTCTACAAG
CGATGTCAGGACCGAGCAGACAGTGAAAGTGATCCTGGAATGAAGCACAAGTTTCTCAAG
CTTCAAAGAAAGCTAAGAGAGGTTGATGATGATGTTCAGAGGCATAACGAACTTCTTGAG
GCAATCAGAAGGTCACCATCGGATGTTAGTGATATTGTTGCCAGGCGTCGTAAAGATTTT
ACAAAAGAGTTTTTTGCTCATCTTCACACTGTGGCAGAATCCTATTATGATGATCCAGCG
GAACAAAATGCTGTGGCAAAACTAGGGAATATGTGTTTGGTAGCTGTGGAGGTTTATGAT
ACTGCAACTGCTAGTATGGAAGCGTTGAATGCTGCAGAGTTGAAATTCCAAGATATAATC
AATTCTCCTTCCGTGGATGCAGCTTGTAAGAAAATAGATGATATGGCCCAAAAAAATCAA
CTTGATTCAGCACTAATGCTCATGATTACAAAAGCATGGTCAGCAGCCAAGGAGTCGGAC
ATGACAAAAGATGAGGCAAGATCATTCTTTTTTCAGATACACATCTACATCTCACTTCTT
CCAGTAAAGGATGTTCTTTATCACTTGTATAAGACAACAAGAGGAAATCTTCAGAGGCTC
ATGCCAAAAGAAATCAGAATTCTGAAATATCTACTCACGATTAAGGATCCTGAGGAGCGA
ATGAGCGCTTTGAAAGATGCCTTCACACCTGGAGAAGAACTTGAAGGGGAAGATGTAGAT
AATTTATACACGACTCCGGAGCAGCTATACAACTGGATAGGGACAGTGCTGGATGCATAT
AATTCCAGTAAAGAAGGCACTCTTATAAAAGAAGCCAGAGACTTGATGAACCCTAAAATA
ATTAAGAAAATGGAGGAGTTGAATAAGTTGATCGTAGATAACTTCATGTAA

Peptide Sequence

PEP ID

Solyc04g072400.3.1
PEP Infomation

Plant/F7F23-4 protein (AHRD V3.3 *** G7IJR9_MEDTR)
Sequence

MVLAASLTTCYAVSVRPSTSASRNFSLLPPLSLIRSPIQQRQPHLAGANSGGSLLSINGV
RLRQSSFAAVIGDTTAVSDGAINEEVSTTKLSDSATTQETDAENGEDRKDASEGLDENKM
IRVCDKLIEVFLVDKPKPTEWRRLLAFSKEWNNIRPHFYKRCQDRADSESDPGMKHKFLK
LQRKLREVDDDVQRHNELLEAIRRSPSDVSDIVARRRKDFTKEFFAHLHTVAESYYDDPA
EQNAVAKLGNMCLVAVEVYDTATASMEALNAAELKFQDIINSPSVDAACKKIDDMAQKNQ
LDSALMLMITKAWSAAKESDMTKDEARSFFFQIHIYISLLPVKDVLYHLYKTTRGNLQRL
MPKEIRILKYLLTIKDPEERMSALKDAFTPGEELEGEDVDNLYTTPEQLYNWIGTVLDAY
NSSKEGTLIKEARDLMNPKIIKKMEELNKLIVDNFM*

Transcript Sequence

Transcript ID

Solyc04g072400.3.1
Transcript Infomation

Plant/F7F23-4 protein (AHRD V3.3 *** G7IJR9_MEDTR)
Sequence

CTCAATCCAAACTCAAGAACTCGTCCATCTTCGAAGGTCCATACTTTCCCAATAAATCAA
AAAAGCACAGGTAGACCCGACCCGACCCGTTTTCCGTTGCTTGATAATTTGTCTTTCCAT
CTGCCTGGTATTTTATTGTAACAAACTGGGAGTGAGTGGTGAGTTCATCTGTTTTCTTCT
TCACTTATAAACCCTCAAAAAAAAGAATCTAAAAGAATTTGTTTATAGCATTAAATAATG
GTGCTAGCAGCTTCTTTAACAACATGCTATGCCGTTTCTGTACGGCCGTCCACTTCTGCT
TCTAGAAACTTCTCTCTTCTTCCGCCGCTATCTCTTATCCGAAGTCCAATTCAACAGCGC
CAGCCGCACCTCGCCGGAGCTAATTCCGGAGGTTCTCTCTTATCTATAAACGGAGTGAGG
TTGCGACAGTCATCTTTTGCTGCTGTAATTGGTGATACAACTGCTGTGTCAGATGGAGCA
ATTAACGAGGAAGTGTCCACTACTAAATTATCTGATTCTGCTACTACTCAGGAAACTGAC
GCGGAAAATGGAGAGGACAGGAAAGATGCTTCTGAAGGGTTGGATGAGAATAAAATGATC
CGAGTATGCGACAAGTTAATTGAGGTCTTCTTGGTTGACAAACCCAAACCTACTGAATGG
AGAAGATTGCTAGCATTTAGTAAGGAATGGAACAATATTCGGCCCCATTTCTACAAGCGA
TGTCAGGACCGAGCAGACAGTGAAAGTGATCCTGGAATGAAGCACAAGTTTCTCAAGCTT
CAAAGAAAGCTAAGAGAGGTTGATGATGATGTTCAGAGGCATAACGAACTTCTTGAGGCA
ATCAGAAGGTCACCATCGGATGTTAGTGATATTGTTGCCAGGCGTCGTAAAGATTTTACA
AAAGAGTTTTTTGCTCATCTTCACACTGTGGCAGAATCCTATTATGATGATCCAGCGGAA
CAAAATGCTGTGGCAAAACTAGGGAATATGTGTTTGGTAGCTGTGGAGGTTTATGATACT
GCAACTGCTAGTATGGAAGCGTTGAATGCTGCAGAGTTGAAATTCCAAGATATAATCAAT
TCTCCTTCCGTGGATGCAGCTTGTAAGAAAATAGATGATATGGCCCAAAAAAATCAACTT
GATTCAGCACTAATGCTCATGATTACAAAAGCATGGTCAGCAGCCAAGGAGTCGGACATG
ACAAAAGATGAGGCAAGATCATTCTTTTTTCAGATACACATCTACATCTCACTTCTTCCA
GTAAAGGATGTTCTTTATCACTTGTATAAGACAACAAGAGGAAATCTTCAGAGGCTCATG
CCAAAAGAAATCAGAATTCTGAAATATCTACTCACGATTAAGGATCCTGAGGAGCGAATG
AGCGCTTTGAAAGATGCCTTCACACCTGGAGAAGAACTTGAAGGGGAAGATGTAGATAAT
TTATACACGACTCCGGAGCAGCTATACAACTGGATAGGGACAGTGCTGGATGCATATAAT
TCCAGTAAAGAAGGCACTCTTATAAAAGAAGCCAGAGACTTGATGAACCCTAAAATAATT
AAGAAAATGGAGGAGTTGAATAAGTTGATCGTAGATAACTTCATGTAAGCATTTGCTTGA
TCGTAAGAAGGTACGAGCTTTGCCGTCAGTGTCCAGATTCATGCTCGTGCTATAAATCAT
CCATACGCAATATATCCCTACGATCAGGAGCATTGGGATGTTGCCAAAAGTGTCGTTTGC
AGTCGCTGGTTGTATAGAACATTTGGAATTGTGTATGATAGGGCTTCTTATTTTTATTGT
GGGATGATAGTTAGTTGATATGGTCATTCTCCTACAGAGAAGCATGATGCTCAGCATCTT
TAGTATGATTGTTATACACGAATGTATTATTTATTATGAAGCTCATTGCTAGTCAACAAT
CAACGTGAAAAGGTACCTTTCTTTTGATAGCCATGGTGACGAACCAGCATGAGTATCAGG
TGATTTGTCCACCTTTTTGCTCAACTTATGAATCCATTAATTAGGTTGAGAGGCCATGTA
TACTTCAGATCATCTTAAAGTATGTAATACATTTGTGCTTAGAAGACCTATACAATGTTT
GTCTCATATGACAATAAAACACATCCATCGTTTTAATTCGGACATTCATGGGAGATATTG
AACATACTTAGCATATAGAAATGGATCATGAAACCAAAAGATAAATTGTATCAACAAGTT
CGGTAGAAAGAGGACTGTATGTTGTATCATGAAGAAGAAAGCTTGTACTCGGAAGACCTA
TACAATGTTTGTTTCATATGTGAACCAACATTTCTCTGGAAAAAATCCTTTCTTTTAGAG
TCTAGAGTCATAACATAATACAGGACATTCATGTGAGAGAGTTGTTGAACATACTAAGCA
CAGAAATGGCTCATTTGGATAATTCACTCTTCTTGCAAAAGCCCATCATGCTTTTATTCG
TTGCACAAGGAATTCCAAGGTTTGAAAGTGCTCCCCTTATGATTCCACATGGGAAATAGA
GATGCATTCCTATGGCTTGTGCAGCTTTGTTTTCAGCCATCGCTGAAGGATCTTGAATAG
AACCAAGAGTTTCTATAGAAGGATCAACTGACATTCGCGACAGCCAACGAAAACGATTTC
CTTGCATATGAATTTGATAGCCTCCAGATGATCAGTGAACCGGGGCCTATCCATGGTATA
CCTAGTAAAAAAAGAAAATATAGAAATAGTACAGAAAGTAAAACAGGAAAGGTAAGACAT
GGTCCAACTTAGTAATAAGATGTTGAGCATGTATATCATACCGAGATCAAGATAGAAGTG
ATAAAAATTCTCAACTAAAAGTCAGGACTCACTGCAGATAATATTAAATACGGTTCAACA
CAATCTAGAGATTACATTACACTTCATACTAGAACACAGAACAAGAACAGTCTCTGGGTT
GCAACTTGATGACAAGCCACAGAAGTTTGTAAACTCAATAAAAAGCAAAAGAAATAACAA
AAAAGAAAAGATAGAACCTAGAGTTTCAGCCTACAAAGTTATGTATGCTTACATCATCAT
TAATTTTAATCCCTCGTATAAGAGATACCTTGACAACCTGTGCTTGTTGGTTGGACGGGC
AACCAGTGGATCAGTAGAGGTTCAATCAAGATGGCCTAGACACCATCAATATTGAAGCTA
AAGTGC