Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g071480.1.1
CDS Infomation

LOW QUALITY:Plant/F1M20-13 protein (AHRD V3.3 *** G7IBZ7_MEDTR)
Sequence

ATGCCAGTTACAGATTATCAAGGAGCATCTGCATCTTTCACAAATTTTGGGAGATCTCTT
TTGAGTATGCGTCGAGATCAGGTGCATTCCATGGAAGCTGCTCATGAGGCGACTAGTCAA
GAGATTGAACTCGAAGCTTTCCAGAAGCAAGTGGCTGAGCGTTTTAATGAATTATCTTCT
GTTGATTCTGATCAATTGCTTTCGGTTCCCTGGATCCGTAAGCTGTTGGATGTGTTCCTC
TGTTGCCAGGAGCAATTCAGGTCTATTTTGTTCAACAACACTGCTAATTTGAACAAACCT
CCTATGGACAGATACGTCACTGAATATTTCGATAGGAGTGTGAAGGGATTGGATGTTTGT
AACGCGATAAGGGATGGAATTGAGCAGATAAAGCAGTGGCAGAAGCAGTTGGAGATTGTT
CTGTGTGCATTGGAAAATCAGAGGTGTGTTGGTGAAGGTCAATTTCGTCGTGCTAAGAAG
GCTTTGATTGATTTTGCAATTGGTATGCTTGATGAGAAGGAGTCTAATACATCTGTGGCT
CATAGAAACAGGTCATTTGGCCGAAACAATACTCAGAATGATCATAAATCTTTAGGCCAT
TTTAGATCATTGTCATGGAGTGTTTCTAGAAATTGGTCTGCTGCTAGGCAGCTTCAAGCA
ATTGGTAACAACTTAGTTGCTCCAAAAAATAACGAAATTGCTGCTACCAATGGATTAGCG
TTGGCTGTTTTCACAATGAGTTATGTGTTATACTTTGTAATGTGGGCACTTGTGGCAGCA
ATACCATGCCAGGACCGTGGGTTGCAGACCCATTTTTATGTGACTAGGCAATTCGTTTGG
GCCGTCCCAATCCTATCACTCCATGAAAGGATTTTGGAGGAATCGAAGAAGAGGGATCGT
AGAAATGCTTGTGGATTGTTGAAGGAGATTCATGAGATGGAGAAATGCGCTCATCATATG
AATGAATTGATCGATACGGTTCATTTTCCAATCACAGAGGAAAAAGATGGAGAAGTGAAG
CTAAGAGTTCATGAACTTGGGCTTGTTTATGATGGTTTAAAGAATGGATTAGACCCTTTA
GAGCGCCAGGTTAGGGAAGTATTCCATCGAATTGTTCGGAGCAGGACTGAAGGCCTCGAC
TCAATCGGACGAGGGAATCATGAGTGA

Peptide Sequence

PEP ID

Solyc04g071480.1.1
PEP Infomation

LOW QUALITY:Plant/F1M20-13 protein (AHRD V3.3 *** G7IBZ7_MEDTR)
Sequence

MPVTDYQGASASFTNFGRSLLSMRRDQVHSMEAAHEATSQEIELEAFQKQVAERFNELSS
VDSDQLLSVPWIRKLLDVFLCCQEQFRSILFNNTANLNKPPMDRYVTEYFDRSVKGLDVC
NAIRDGIEQIKQWQKQLEIVLCALENQRCVGEGQFRRAKKALIDFAIGMLDEKESNTSVA
HRNRSFGRNNTQNDHKSLGHFRSLSWSVSRNWSAARQLQAIGNNLVAPKNNEIAATNGLA
LAVFTMSYVLYFVMWALVAAIPCQDRGLQTHFYVTRQFVWAVPILSLHERILEESKKRDR
RNACGLLKEIHEMEKCAHHMNELIDTVHFPITEEKDGEVKLRVHELGLVYDGLKNGLDPL
ERQVREVFHRIVRSRTEGLDSIGRGNHE*

Transcript Sequence

Transcript ID

Solyc04g071480.1.1
Transcript Infomation

LOW QUALITY:Plant/F1M20-13 protein (AHRD V3.3 *** G7IBZ7_MEDTR)
Sequence

ATGCCAGTTACAGATTATCAAGGAGCATCTGCATCTTTCACAAATTTTGGGAGATCTCTT
TTGAGTATGCGTCGAGATCAGGTGCATTCCATGGAAGCTGCTCATGAGGCGACTAGTCAA
GAGATTGAACTCGAAGCTTTCCAGAAGCAAGTGGCTGAGCGTTTTAATGAATTATCTTCT
GTTGATTCTGATCAATTGCTTTCGGTTCCCTGGATCCGTAAGCTGTTGGATGTGTTCCTC
TGTTGCCAGGAGCAATTCAGGTCTATTTTGTTCAACAACACTGCTAATTTGAACAAACCT
CCTATGGACAGATACGTCACTGAATATTTCGATAGGAGTGTGAAGGGATTGGATGTTTGT
AACGCGATAAGGGATGGAATTGAGCAGATAAAGCAGTGGCAGAAGCAGTTGGAGATTGTT
CTGTGTGCATTGGAAAATCAGAGGTGTGTTGGTGAAGGTCAATTTCGTCGTGCTAAGAAG
GCTTTGATTGATTTTGCAATTGGTATGCTTGATGAGAAGGAGTCTAATACATCTGTGGCT
CATAGAAACAGGTCATTTGGCCGAAACAATACTCAGAATGATCATAAATCTTTAGGCCAT
TTTAGATCATTGTCATGGAGTGTTTCTAGAAATTGGTCTGCTGCTAGGCAGCTTCAAGCA
ATTGGTAACAACTTAGTTGCTCCAAAAAATAACGAAATTGCTGCTACCAATGGATTAGCG
TTGGCTGTTTTCACAATGAGTTATGTGTTATACTTTGTAATGTGGGCACTTGTGGCAGCA
ATACCATGCCAGGACCGTGGGTTGCAGACCCATTTTTATGTGACTAGGCAATTCGTTTGG
GCCGTCCCAATCCTATCACTCCATGAAAGGATTTTGGAGGAATCGAAGAAGAGGGATCGT
AGAAATGCTTGTGGATTGTTGAAGGAGATTCATGAGATGGAGAAATGCGCTCATCATATG
AATGAATTGATCGATACGGTTCATTTTCCAATCACAGAGGAAAAAGATGGAGAAGTGAAG
CTAAGAGTTCATGAACTTGGGCTTGTTTATGATGGTTTAAAGAATGGATTAGACCCTTTA
GAGCGCCAGGTTAGGGAAGTATTCCATCGAATTGTTCGGAGCAGGACTGAAGGCCTCGAC
TCAATCGGACGAGGGAATCATGAGTGA